Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298727

Identifier: 146298727

GI number: 146298727

Start: 1081228

End: 1082166

Strand: Direct

Name: 146298727

Synonym: Fjoh_0966

Alternate gene names: NA

Gene position: 1081228-1082166 (Clockwise)

Preceding gene: 146298726

Following gene: 146298731

Centisome position: 17.73

GC content: 39.19

Gene sequence:

>939_bases
ATGAAAAAAATAGCATTTTTACTCGTACTCAGCAGTGCCTTTATGTCTGCACAAATTAAAACTGTACTAAGCCCATACGG
CGAAAAAGTAAACATAAATCTCAGCCCGCCGGGCGATAATTTAGGAAATCATACTGCCACTACAACCTTAAATTTAAATA
ATAATGATATTAGTAATATAGCTGATATTTATATTAAAAAAGAAGCCCAATTTTTAGATCAAAGCGGCACCAACACTAAT
TATTTTTCATTAAAAAAAGACAACGGTACTTTTGGCATTTACAATTCACTTGTTGGAAGCAATGCCTTGTCTATAGACGA
AACCACCTCTAAAACTACCGTGGTTTCTGCACAAATACCAAAAGGTACAGATGCCTCACTGCCGCAGAAAGATGATATAG
CGGTTTCTACCGATGCAAACGGAAACGTAATCTGGAAACCTCTAGTGAGAATTAAAGGCGCCACCATGTTCCAGTTTTTC
GTTAGGGCAGATCAAAATTCAAAATTTAACTCTGCGGTTTTTAATCCTGTTTCCAGAATGGAAAACATTCCTTATACTGC
TCCTGTAAACGGGGTATTGTATCTTGAGGCCAATTTAATTTCTACCGTTCCGGATATTTTTCTTACCAAAAGCCCAACGG
TGGTTAAAACCGAAATGGCAGTTATGGTAGACGGTACACCTATTGGGTATGGTTCTTCTTTAATTACTACAGCACCAGTT
TCTACTTTTGCCAATAAAACAGATCTCTTTCCAGCCACTACCACTATTTACTGCCAGATACCGGTAACAGAAGGAACAAC
CTACAGCATTTCTGTTCAGGCCAGAACACCAGACCAGACCAATGGCGGCAGCTATGTGGGACTTTACAAAGGTAAAGATT
CTGACGGAGGTCCTACTGCTATACTATCATCCTTGATGGGAACACTGGTTACAGACTAG

Upstream 100 bases:

>100_bases
AAAGCCGGGCAGAAACCATTTTTTACAAATTTTTTGCGACTCTAACAAATTCTTATTTCTTTTCTGCCCGCTTTATATAA
CTCATTAAGATAAAATTATT

Downstream 100 bases:

>100_bases
TTTAATTTTTACAAAGTCTATCTAAACGAATTTATAAACACAAGCTTCATAGAGATTTTCCTTTATAAAGCTTGTGTATT
CTTAATCAGCGATAATTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKIAFLLVLSSAFMSAQIKTVLSPYGEKVNINLSPPGDNLGNHTATTTLNLNNNDISNIADIYIKKEAQFLDQSGTNTN
YFSLKKDNGTFGIYNSLVGSNALSIDETTSKTTVVSAQIPKGTDASLPQKDDIAVSTDANGNVIWKPLVRIKGATMFQFF
VRADQNSKFNSAVFNPVSRMENIPYTAPVNGVLYLEANLISTVPDIFLTKSPTVVKTEMAVMVDGTPIGYGSSLITTAPV
STFANKTDLFPATTTIYCQIPVTEGTTYSISVQARTPDQTNGGSYVGLYKGKDSDGGPTAILSSLMGTLVTD

Sequences:

>Translated_312_residues
MKKIAFLLVLSSAFMSAQIKTVLSPYGEKVNINLSPPGDNLGNHTATTTLNLNNNDISNIADIYIKKEAQFLDQSGTNTN
YFSLKKDNGTFGIYNSLVGSNALSIDETTSKTTVVSAQIPKGTDASLPQKDDIAVSTDANGNVIWKPLVRIKGATMFQFF
VRADQNSKFNSAVFNPVSRMENIPYTAPVNGVLYLEANLISTVPDIFLTKSPTVVKTEMAVMVDGTPIGYGSSLITTAPV
STFANKTDLFPATTTIYCQIPVTEGTTYSISVQARTPDQTNGGSYVGLYKGKDSDGGPTAILSSLMGTLVTD
>Mature_312_residues
MKKIAFLLVLSSAFMSAQIKTVLSPYGEKVNINLSPPGDNLGNHTATTTLNLNNNDISNIADIYIKKEAQFLDQSGTNTN
YFSLKKDNGTFGIYNSLVGSNALSIDETTSKTTVVSAQIPKGTDASLPQKDDIAVSTDANGNVIWKPLVRIKGATMFQFF
VRADQNSKFNSAVFNPVSRMENIPYTAPVNGVLYLEANLISTVPDIFLTKSPTVVKTEMAVMVDGTPIGYGSSLITTAPV
STFANKTDLFPATTTIYCQIPVTEGTTYSISVQARTPDQTNGGSYVGLYKGKDSDGGPTAILSSLMGTLVTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33346; Mature: 33346

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAFLLVLSSAFMSAQIKTVLSPYGEKVNINLSPPGDNLGNHTATTTLNLNNNDISNI
CCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCE
ADIYIKKEAQFLDQSGTNTNYFSLKKDNGTFGIYNSLVGSNALSIDETTSKTTVVSAQIP
EEEEEECHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCEEECCCCCCEEEEEEECC
KGTDASLPQKDDIAVSTDANGNVIWKPLVRIKGATMFQFFVRADQNSKFNSAVFNPVSRM
CCCCCCCCCCCCEEEEECCCCCEEEEEHEEECCCEEEEEEEECCCCCCCCHHHHCHHHHH
ENIPYTAPVNGVLYLEANLISTVPDIFLTKSPTVVKTEMAVMVDGTPIGYGSSLITTAPV
CCCCCCCCCCEEEEEECCHHHHCCHHEEECCCCEEEEEEEEEECCCCCCCCCCEEEECCH
STFANKTDLFPATTTIYCQIPVTEGTTYSISVQARTPDQTNGGSYVGLYKGKDSDGGPTA
HHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCHHH
ILSSLMGTLVTD
HHHHHHHHHCCC
>Mature Secondary Structure
MKKIAFLLVLSSAFMSAQIKTVLSPYGEKVNINLSPPGDNLGNHTATTTLNLNNNDISNI
CCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCE
ADIYIKKEAQFLDQSGTNTNYFSLKKDNGTFGIYNSLVGSNALSIDETTSKTTVVSAQIP
EEEEEECHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCEEECCCCCCEEEEEEECC
KGTDASLPQKDDIAVSTDANGNVIWKPLVRIKGATMFQFFVRADQNSKFNSAVFNPVSRM
CCCCCCCCCCCCEEEEECCCCCEEEEEHEEECCCEEEEEEEECCCCCCCCHHHHCHHHHH
ENIPYTAPVNGVLYLEANLISTVPDIFLTKSPTVVKTEMAVMVDGTPIGYGSSLITTAPV
CCCCCCCCCCEEEEEECCHHHHCCHHEEECCCCEEEEEEEEEECCCCCCCCCCEEEECCH
STFANKTDLFPATTTIYCQIPVTEGTTYSISVQARTPDQTNGGSYVGLYKGKDSDGGPTA
HHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCHHH
ILSSLMGTLVTD
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA