| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298633
Identifier: 146298633
GI number: 146298633
Start: 983313
End: 985712
Strand: Direct
Name: 146298633
Synonym: Fjoh_0871
Alternate gene names: NA
Gene position: 983313-985712 (Clockwise)
Preceding gene: 146298632
Following gene: 146298635
Centisome position: 16.13
GC content: 35.67
Gene sequence:
>2400_bases ATGAGAAAAAACCCCACCTCGATTCTCGCAATAATCTGCATTCTGGCATTGTTAGCTGCTATATATGCCACGATGATGCC TCAATACATTTCAAAAAATGATGAAGCTCTCGCCGATTTTTCTACCGAAAGAGCTTTAAATCAGGTTGAAATTATAGCTC AAAAACCTCATTATGTAGGTTCAACTAATCATGAATTGGTTGCTAATTATCTTAAACTTGAGCTTAACAGAATTGGATTA GAAACAAGTGTTCAGGAAGGTTTTACTCTTAATGATAAAGGGCTTTTGGTAAAATCTAAAAATATCCTTGCCCGAATAAA GGGAACAAACAATACAAAAGCACTATTATTACTTTCTCATTATGATAGTGCACCGCATTCTTTTTCAAAAGGTGCAAGTG ATGATGCCTCTGGGGTTGCCACAATATTAGAAGGAATCAGGGCTTTTTTATATGCCAAAGAACCTCAGAAAAACGACATC ATTATTCTTTTTTCAGATGCTGAAGAATTAGGTTTAAACGGCGCGGCACTTTTTGTAAACAAACATCCGTGGGCAAAAGA TGTTGGTTTGGTTTTAAACTTTGAAGCAAGGGGAACTTCAGGACCAAGTTATATGCTGATGGAAACCAATCAGGGAAATC AGGCACTTGTAAAAGAATTTACCAAAGCAAAACCTTCTTATCCGGTTTCAAATTCATTGATGTACAGCATCTACAAAATG CTTCCAAATGATACTGATTTGACTGTTTTTAGAGAGCAGGGAAATATTCAGGGGTTTAATTTTGCTTTTATCGACGGACA TTACAATTATCACACACAGCAGGACGATGTTCAGCATTTAAACAAAATGACATTGGCGCATCAGGGTTCTTATTTGATGC CTTTATTAAAATACTTCGCAAATACTGACTTAAACCAAATTACTTCACCAAATTCAGAAGATTACGTTTATTTCAACGCA CCTTTTTCTTTCATAAGTTATCCTTTTTCATGGGTAATGCCAATGACACTTATCGCTTTTGGTCTTTTAATCCTTTTTAT GTTCATTGGAAAAGCCAAAAGAATGATTTCATTAAGAGAAATATTCAAAGGCTTTGTACCGCTTTTAGGATCTGTAATTA TTGCTGGTTTAGTAACCTTTTTAGGATGGAAAATTATTCTAGAGATTTATCCGCAGTATTCGGATCTTTTAAACGGATTT ACCTACAACGGACATGCTTACATTGGCGCGTTTGTAACTTTAAGCATTGCCATCTGCTTTGCTTTTTACCATCATTTTTC TGATGCAAAAATAACAATGACCCATTTCGTAGCGCCTTTGCTGCTTTGGATTATTATTAATGCTTTTTTAGCAAACAGTT TAACTGGAGCAGGATTCTTAATTATTCCGGTATATTTTGGAATTCTTTTATTCGGAATCTTCGTTTTTACGCAGCATTAC AGTTTAGGCATGAATTTACTTTTCAGTATTCCGGCTTTGGCTATTATCGCTCCGTTTATTGTAATGTTTCCAATTGGTTT AGGTCTAAAAATACTATTTGGAAGTGCAATTCTAACTGTCCTTCTTTTCGGATTGTTACTGCCAATATTTAATACTTTCG CTAAAAAAGGTGCTTGGATTATGGTTTTCTTTGCAATTTCCATCGGATTTTTTATTTATGCAGGAATTCATTCCAGCTAT GAACCCGGAAAGGCAAAATCTAACAGTTTGTTATATATCTATAATGCCAACACCAACTCGGCAGTTTGGGCAACTTATGA TGTAAACCTTGATGAATGGACTAAAACGTATTTAGGGCAGAAAAATCAAAAAGTTGTTGGTCTCAACAGTCTGCCAATCG CAAGTAAATACAATACAAGATTTACATACAGCTCCATAGCACCAATTGTTGATGTTCCAAAACCAACTATTGCTTTCCTG AAAGACAGTGTTGTGGGTAATAATCGCTATTTAAAAATCAAGATTACGCCAAATAGAAAAGTGAACCGTTACGATATTTA TGCTAATCCAAAAATGACATTTTATAATTTCAAAGCAAATGGTGTATCTACTTCGGGCAAAAAGACAAATCGTTTAGAAC GAGACGGAATGCGCCTGTTATGCTATTATGTTGTAGGCAACGAACCGCTTGTTATGGATTTCTATATTAACAAATCGTCT ATTTTTGATATGGATTTAATTGAAAGTTCTTTCGATTTAATGACAAACCCTCTGCTTAAAGTAAATCCGAGAAGCGACTG GATGATGCCGACTCCATTTGTATTGAATGATGCCGTAATAATTCAGCAGAAAATTAAACGATATACCGCTCCGGTTAATC CGCCAGTACAGCCGGCACCAGTTAAGGACAGCGCCGTAATTGCAAAAGACAGTTTAATACAGCCTGTTACGCAGCCGTAA
Upstream 100 bases:
>100_bases AAACAGGCAATACCTACTATTTCCTGTACGACCAGGGATACAGGTCTTTGGACAATGATTATTATATGCTTGTTAAAAAA GAAATTTAGATGTATTTACT
Downstream 100 bases:
>100_bases TAAAGTATTTTTAAAATAATAAAAAAGCAGACTTTGTAATCAAAGTCTGCTTTTTTTTTAACAGGCACATTCAATTTTTA AACCTGTTTTAATTCCTTTG
Product: peptidase M28
Products: NA
Alternate protein names: Peptidase; Aminopeptidase; M28 Family Peptidase; Peptidase Family M; Peptidase Family
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MRKNPTSILAIICILALLAAIYATMMPQYISKNDEALADFSTERALNQVEIIAQKPHYVGSTNHELVANYLKLELNRIGL ETSVQEGFTLNDKGLLVKSKNILARIKGTNNTKALLLLSHYDSAPHSFSKGASDDASGVATILEGIRAFLYAKEPQKNDI IILFSDAEELGLNGAALFVNKHPWAKDVGLVLNFEARGTSGPSYMLMETNQGNQALVKEFTKAKPSYPVSNSLMYSIYKM LPNDTDLTVFREQGNIQGFNFAFIDGHYNYHTQQDDVQHLNKMTLAHQGSYLMPLLKYFANTDLNQITSPNSEDYVYFNA PFSFISYPFSWVMPMTLIAFGLLILFMFIGKAKRMISLREIFKGFVPLLGSVIIAGLVTFLGWKIILEIYPQYSDLLNGF TYNGHAYIGAFVTLSIAICFAFYHHFSDAKITMTHFVAPLLLWIIINAFLANSLTGAGFLIIPVYFGILLFGIFVFTQHY SLGMNLLFSIPALAIIAPFIVMFPIGLGLKILFGSAILTVLLFGLLLPIFNTFAKKGAWIMVFFAISIGFFIYAGIHSSY EPGKAKSNSLLYIYNANTNSAVWATYDVNLDEWTKTYLGQKNQKVVGLNSLPIASKYNTRFTYSSIAPIVDVPKPTIAFL KDSVVGNNRYLKIKITPNRKVNRYDIYANPKMTFYNFKANGVSTSGKKTNRLERDGMRLLCYYVVGNEPLVMDFYINKSS IFDMDLIESSFDLMTNPLLKVNPRSDWMMPTPFVLNDAVIIQQKIKRYTAPVNPPVQPAPVKDSAVIAKDSLIQPVTQP
Sequences:
>Translated_799_residues MRKNPTSILAIICILALLAAIYATMMPQYISKNDEALADFSTERALNQVEIIAQKPHYVGSTNHELVANYLKLELNRIGL ETSVQEGFTLNDKGLLVKSKNILARIKGTNNTKALLLLSHYDSAPHSFSKGASDDASGVATILEGIRAFLYAKEPQKNDI IILFSDAEELGLNGAALFVNKHPWAKDVGLVLNFEARGTSGPSYMLMETNQGNQALVKEFTKAKPSYPVSNSLMYSIYKM LPNDTDLTVFREQGNIQGFNFAFIDGHYNYHTQQDDVQHLNKMTLAHQGSYLMPLLKYFANTDLNQITSPNSEDYVYFNA PFSFISYPFSWVMPMTLIAFGLLILFMFIGKAKRMISLREIFKGFVPLLGSVIIAGLVTFLGWKIILEIYPQYSDLLNGF TYNGHAYIGAFVTLSIAICFAFYHHFSDAKITMTHFVAPLLLWIIINAFLANSLTGAGFLIIPVYFGILLFGIFVFTQHY SLGMNLLFSIPALAIIAPFIVMFPIGLGLKILFGSAILTVLLFGLLLPIFNTFAKKGAWIMVFFAISIGFFIYAGIHSSY EPGKAKSNSLLYIYNANTNSAVWATYDVNLDEWTKTYLGQKNQKVVGLNSLPIASKYNTRFTYSSIAPIVDVPKPTIAFL KDSVVGNNRYLKIKITPNRKVNRYDIYANPKMTFYNFKANGVSTSGKKTNRLERDGMRLLCYYVVGNEPLVMDFYINKSS IFDMDLIESSFDLMTNPLLKVNPRSDWMMPTPFVLNDAVIIQQKIKRYTAPVNPPVQPAPVKDSAVIAKDSLIQPVTQP >Mature_799_residues MRKNPTSILAIICILALLAAIYATMMPQYISKNDEALADFSTERALNQVEIIAQKPHYVGSTNHELVANYLKLELNRIGL ETSVQEGFTLNDKGLLVKSKNILARIKGTNNTKALLLLSHYDSAPHSFSKGASDDASGVATILEGIRAFLYAKEPQKNDI IILFSDAEELGLNGAALFVNKHPWAKDVGLVLNFEARGTSGPSYMLMETNQGNQALVKEFTKAKPSYPVSNSLMYSIYKM LPNDTDLTVFREQGNIQGFNFAFIDGHYNYHTQQDDVQHLNKMTLAHQGSYLMPLLKYFANTDLNQITSPNSEDYVYFNA PFSFISYPFSWVMPMTLIAFGLLILFMFIGKAKRMISLREIFKGFVPLLGSVIIAGLVTFLGWKIILEIYPQYSDLLNGF TYNGHAYIGAFVTLSIAICFAFYHHFSDAKITMTHFVAPLLLWIIINAFLANSLTGAGFLIIPVYFGILLFGIFVFTQHY SLGMNLLFSIPALAIIAPFIVMFPIGLGLKILFGSAILTVLLFGLLLPIFNTFAKKGAWIMVFFAISIGFFIYAGIHSSY EPGKAKSNSLLYIYNANTNSAVWATYDVNLDEWTKTYLGQKNQKVVGLNSLPIASKYNTRFTYSSIAPIVDVPKPTIAFL KDSVVGNNRYLKIKITPNRKVNRYDIYANPKMTFYNFKANGVSTSGKKTNRLERDGMRLLCYYVVGNEPLVMDFYINKSS IFDMDLIESSFDLMTNPLLKVNPRSDWMMPTPFVLNDAVIIQQKIKRYTAPVNPPVQPAPVKDSAVIAKDSLIQPVTQP
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI55749804, Length=287, Percent_Identity=26.8292682926829, Blast_Score=111, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17531383, Length=317, Percent_Identity=26.813880126183, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193204254, Length=304, Percent_Identity=30.2631578947368, Blast_Score=111, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319548, Length=252, Percent_Identity=26.984126984127, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24655610, Length=301, Percent_Identity=28.2392026578073, Blast_Score=129, Evalue=8e-30, Organism=Drosophila melanogaster, GI45550463, Length=295, Percent_Identity=28.8135593220339, Blast_Score=129, Evalue=9e-30, Organism=Drosophila melanogaster, GI281363746, Length=313, Percent_Identity=27.7955271565495, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI45550464, Length=313, Percent_Identity=27.7955271565495, Blast_Score=125, Evalue=2e-28, Organism=Drosophila melanogaster, GI28573565, Length=388, Percent_Identity=27.5773195876289, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI28573701, Length=588, Percent_Identity=24.4897959183673, Blast_Score=114, Evalue=4e-25, Organism=Drosophila melanogaster, GI221330185, Length=498, Percent_Identity=26.1044176706827, Blast_Score=112, Evalue=9e-25, Organism=Drosophila melanogaster, GI28573381, Length=340, Percent_Identity=27.0588235294118, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI24652993, Length=399, Percent_Identity=25.5639097744361, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI24655613, Length=316, Percent_Identity=26.2658227848101, Blast_Score=110, Evalue=5e-24, Organism=Drosophila melanogaster, GI24652989, Length=438, Percent_Identity=23.972602739726, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI221330187, Length=316, Percent_Identity=27.2151898734177, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI24655630, Length=316, Percent_Identity=27.5316455696203, Blast_Score=100, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89418; Mature: 89418
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNPTSILAIICILALLAAIYATMMPQYISKNDEALADFSTERALNQVEIIAQKPHYVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCC STNHELVANYLKLELNRIGLETSVQEGFTLNDKGLLVKSKNILARIKGTNNTKALLLLSH CCCHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCEEEECCCEEEEEECCCCCEEEEEEEC YDSAPHSFSKGASDDASGVATILEGIRAFLYAKEPQKNDIIILFSDAEELGLNGAALFVN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCHHHHCCCCEEEEEE KHPWAKDVGLVLNFEARGTSGPSYMLMETNQGNQALVKEFTKAKPSYPVSNSLMYSIYKM CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LPNDTDLTVFREQGNIQGFNFAFIDGHYNYHTQQDDVQHLNKMTLAHQGSYLMPLLKYFA CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH NTDLNQITSPNSEDYVYFNAPFSFISYPFSWVMPMTLIAFGLLILFMFIGKAKRMISLRE CCCHHHCCCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKGFVPLLGSVIIAGLVTFLGWKIILEIYPQYSDLLNGFTYNGHAYIGAFVTLSIAICF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCHHHHHHHHHHHHHHH AFYHHFSDAKITMTHFVAPLLLWIIINAFLANSLTGAGFLIIPVYFGILLFGIFVFTQHY HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLGMNLLFSIPALAIIAPFIVMFPIGLGLKILFGSAILTVLLFGLLLPIFNTFAKKGAWI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE MVFFAISIGFFIYAGIHSSYEPGKAKSNSLLYIYNANTNSAVWATYDVNLDEWTKTYLGQ EHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHCCC KNQKVVGLNSLPIASKYNTRFTYSSIAPIVDVPKPTIAFLKDSVVGNNRYLKIKITPNRK CCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC VNRYDIYANPKMTFYNFKANGVSTSGKKTNRLERDGMRLLCYYVVGNEPLVMDFYINKSS CEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEEEEECCCC IFDMDLIESSFDLMTNPLLKVNPRSDWMMPTPFVLNDAVIIQQKIKRYTAPVNPPVQPAP CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC VKDSAVIAKDSLIQPVTQP CCCCEEEEHHHHCCCCCCC >Mature Secondary Structure MRKNPTSILAIICILALLAAIYATMMPQYISKNDEALADFSTERALNQVEIIAQKPHYVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCC STNHELVANYLKLELNRIGLETSVQEGFTLNDKGLLVKSKNILARIKGTNNTKALLLLSH CCCHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCEEEECCCEEEEEECCCCCEEEEEEEC YDSAPHSFSKGASDDASGVATILEGIRAFLYAKEPQKNDIIILFSDAEELGLNGAALFVN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCHHHHCCCCEEEEEE KHPWAKDVGLVLNFEARGTSGPSYMLMETNQGNQALVKEFTKAKPSYPVSNSLMYSIYKM CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LPNDTDLTVFREQGNIQGFNFAFIDGHYNYHTQQDDVQHLNKMTLAHQGSYLMPLLKYFA CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH NTDLNQITSPNSEDYVYFNAPFSFISYPFSWVMPMTLIAFGLLILFMFIGKAKRMISLRE CCCHHHCCCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKGFVPLLGSVIIAGLVTFLGWKIILEIYPQYSDLLNGFTYNGHAYIGAFVTLSIAICF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCHHHHHHHHHHHHHHH AFYHHFSDAKITMTHFVAPLLLWIIINAFLANSLTGAGFLIIPVYFGILLFGIFVFTQHY HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLGMNLLFSIPALAIIAPFIVMFPIGLGLKILFGSAILTVLLFGLLLPIFNTFAKKGAWI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE MVFFAISIGFFIYAGIHSSYEPGKAKSNSLLYIYNANTNSAVWATYDVNLDEWTKTYLGQ EHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHCCC KNQKVVGLNSLPIASKYNTRFTYSSIAPIVDVPKPTIAFLKDSVVGNNRYLKIKITPNRK CCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC VNRYDIYANPKMTFYNFKANGVSTSGKKTNRLERDGMRLLCYYVVGNEPLVMDFYINKSS CEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEEEEECCCC IFDMDLIESSFDLMTNPLLKVNPRSDWMMPTPFVLNDAVIIQQKIKRYTAPVNPPVQPAP CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC VKDSAVIAKDSLIQPVTQP CCCCEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA