| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yhcX [H]
Identifier: 146298631
GI number: 146298631
Start: 981386
End: 982954
Strand: Direct
Name: yhcX [H]
Synonym: Fjoh_0869
Alternate gene names: 146298631
Gene position: 981386-982954 (Clockwise)
Preceding gene: 146298629
Following gene: 146298632
Centisome position: 16.1
GC content: 35.37
Gene sequence:
>1569_bases ATGGAATTTATTTTTGCTATATTTGAGATAAATCGTACATATATGCAGACAGAAATTAAAAAAGTTGAGTTACGAAACCT TGCGTTTGAAGATTACAAACAATTGAAAAATTCAATGGTTGAATCGTATCCAGAAATGGCAAACTCCTACTGGAGATCTA ATGACATCAAAAAACTACTCTCAATATTTCCCGAAGGACAATTGGTAATATTAGTCGACGGCGTAGTCGTAGGTTCAGCA TTATCGCTTATTGTCGATGAAAAACTGGTTGACAAAAGACACAATTACAGACAAATCATTGGCGATTATACTTTTTCGAC CCATAACCCTGACGGTGAAATTTTGTACGGAATTGATGTTTTCATTCATCCAAATTACCGCGGACTTCGTTTGGGCCGAC GTCTTTATGATGCCCGAAAAGAACTTTGCGAACAACTGAACTTAAAAGCGATTGTTTTTGCAGGAAGGATTCCCAATTAC AATCAATATTCGAAAAAGCTTTCACCAAGAAATTATATCGAGAAAGTAAAAGACAAGGAACTTCATGATCCGGTTCTTTC ATTTCAATTGAGCAATGATTTCCATGTATTACGCATCATTAAAAATTATTTGGAAGGCGACGAAGAATCTAAAGAATTTG CAGTTCTTCTGGAATGGAACAATGTGTATTATGATGAAAGTCCAAAGTTGATTAATTCTGAAAAAAGCATTATTCGTTTA GGATTAATTCAATGGCAGATGCGTCAGCTTAATAATGTTGAAGCTCTTTTTGAACAGGCTGAATTTTTTATTGATGTTGT TTCCGGCTATGGAAGTGACTTTGCTCTTTTCCCAGAACTTTTCACAGCACCTTTAATGGCCGATTTTAATCACTTATCTG AAGCCGAAGCGATTCGGGAATTAGCAAGACACTCTGACCCCATTAGAAAACGCTTTCAGGAATTTGCCATTTCATACAAT ATCAATATCATAACCGGAAGTATGCCTCATCTTGAAAACGGTATCTTGTATAATGTTGGTTTTTTATGCAAAAGAGACGG AACTTCTGAGATGTATTATAAAATTCACATCACACCAAATGAAGTGCATCATTGGGGAATGAAAGGCGGATCTGAATTTA AAACTTACGATACAGATTGTGGTAAAATTGGAATTTTAATTTGTTATGATGTCGAATTCCCTGAGCTTTCAAGATTATTG GCCGATGAAGGAATGAATATCTTATTTGTTCCGTTCTTGACCGATACTCAAAATGCTTACACTCGTGTAAAACACTGCTC TCAGGCGCGTGCAATCGAAAACGAATGTTATGTAGCGATTGCGGGCTGTGTTGGAAATCTTCCGAAAGTAAACAATATGG ATATTCAATATGCACAGGCTTCGGTTTTTACACCTTCTGATTTTGCTTTTCCAAGTAATGGAATTAAAGCAGAAGCTACT CCAAATACAGAAATGACTTTGATTGTTGATGTTGATCTAAATTTATTGAAAAATCTTCATGAACATGGAAGCGTGCGAAT TCTAAAAGACAGAAGAACAGATTTGTATCAAATTAACAAAACAAAATAA
Upstream 100 bases:
>100_bases CGTTGATCAAATTCAACGATGCAAAATTGCGCTGTCTCGGCTAAAATATTCGGTTGCAAACTATTTACTTTCGGTTGTAA ATATTTGTAAGCGTTTGTAA
Downstream 100 bases:
>100_bases TGAGAACGTGTCTTGAATGCTCTGAAAAACTTGTAGGCAGAGAAGATAAAAAGTTTTGTTCAGACAGCTGCCGAAATGCT TATAATAACAAAATAAACAA
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MEFIFAIFEINRTYMQTEIKKVELRNLAFEDYKQLKNSMVESYPEMANSYWRSNDIKKLLSIFPEGQLVILVDGVVVGSA LSLIVDEKLVDKRHNYRQIIGDYTFSTHNPDGEILYGIDVFIHPNYRGLRLGRRLYDARKELCEQLNLKAIVFAGRIPNY NQYSKKLSPRNYIEKVKDKELHDPVLSFQLSNDFHVLRIIKNYLEGDEESKEFAVLLEWNNVYYDESPKLINSEKSIIRL GLIQWQMRQLNNVEALFEQAEFFIDVVSGYGSDFALFPELFTAPLMADFNHLSEAEAIRELARHSDPIRKRFQEFAISYN INIITGSMPHLENGILYNVGFLCKRDGTSEMYYKIHITPNEVHHWGMKGGSEFKTYDTDCGKIGILICYDVEFPELSRLL ADEGMNILFVPFLTDTQNAYTRVKHCSQARAIENECYVAIAGCVGNLPKVNNMDIQYAQASVFTPSDFAFPSNGIKAEAT PNTEMTLIVDVDLNLLKNLHEHGSVRILKDRRTDLYQINKTK
Sequences:
>Translated_522_residues MEFIFAIFEINRTYMQTEIKKVELRNLAFEDYKQLKNSMVESYPEMANSYWRSNDIKKLLSIFPEGQLVILVDGVVVGSA LSLIVDEKLVDKRHNYRQIIGDYTFSTHNPDGEILYGIDVFIHPNYRGLRLGRRLYDARKELCEQLNLKAIVFAGRIPNY NQYSKKLSPRNYIEKVKDKELHDPVLSFQLSNDFHVLRIIKNYLEGDEESKEFAVLLEWNNVYYDESPKLINSEKSIIRL GLIQWQMRQLNNVEALFEQAEFFIDVVSGYGSDFALFPELFTAPLMADFNHLSEAEAIRELARHSDPIRKRFQEFAISYN INIITGSMPHLENGILYNVGFLCKRDGTSEMYYKIHITPNEVHHWGMKGGSEFKTYDTDCGKIGILICYDVEFPELSRLL ADEGMNILFVPFLTDTQNAYTRVKHCSQARAIENECYVAIAGCVGNLPKVNNMDIQYAQASVFTPSDFAFPSNGIKAEAT PNTEMTLIVDVDLNLLKNLHEHGSVRILKDRRTDLYQINKTK >Mature_522_residues MEFIFAIFEINRTYMQTEIKKVELRNLAFEDYKQLKNSMVESYPEMANSYWRSNDIKKLLSIFPEGQLVILVDGVVVGSA LSLIVDEKLVDKRHNYRQIIGDYTFSTHNPDGEILYGIDVFIHPNYRGLRLGRRLYDARKELCEQLNLKAIVFAGRIPNY NQYSKKLSPRNYIEKVKDKELHDPVLSFQLSNDFHVLRIIKNYLEGDEESKEFAVLLEWNNVYYDESPKLINSEKSIIRL GLIQWQMRQLNNVEALFEQAEFFIDVVSGYGSDFALFPELFTAPLMADFNHLSEAEAIRELARHSDPIRKRFQEFAISYN INIITGSMPHLENGILYNVGFLCKRDGTSEMYYKIHITPNEVHHWGMKGGSEFKTYDTDCGKIGILICYDVEFPELSRLL ADEGMNILFVPFLTDTQNAYTRVKHCSQARAIENECYVAIAGCVGNLPKVNNMDIQYAQASVFTPSDFAFPSNGIKAEAT PNTEMTLIVDVDLNLLKNLHEHGSVRILKDRRTDLYQINKTK
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=296, Percent_Identity=25.6756756756757, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI5031947, Length=192, Percent_Identity=31.7708333333333, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI297632348, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI297632350, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17556280, Length=288, Percent_Identity=27.4305555555556, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323383, Length=292, Percent_Identity=25, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 60271; Mature: 60271
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIFAIFEINRTYMQTEIKKVELRNLAFEDYKQLKNSMVESYPEMANSYWRSNDIKKLL CCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SIFPEGQLVILVDGVVVGSALSLIVDEKLVDKRHNYRQIIGDYTFSTHNPDGEILYGIDV HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE FIHPNYRGLRLGRRLYDARKELCEQLNLKAIVFAGRIPNYNQYSKKLSPRNYIEKVKDKE EECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHCCCH LHDPVLSFQLSNDFHVLRIIKNYLEGDEESKEFAVLLEWNNVYYDESPKLINSEKSIIRL HCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHH GLIQWQMRQLNNVEALFEQAEFFIDVVSGYGSDFALFPELFTAPLMADFNHLSEAEAIRE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH LARHSDPIRKRFQEFAISYNINIITGSMPHLENGILYNVGFLCKRDGTSEMYYKIHITPN HHHCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEECEEEECCCCCEEEEEEEEEHH EVHHWGMKGGSEFKTYDTDCGKIGILICYDVEFPELSRLLADEGMNILFVPFLTDTQNAY HHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHH TRVKHCSQARAIENECYVAIAGCVGNLPKVNNMDIQYAQASVFTPSDFAFPSNGIKAEAT HHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCC PNTEMTLIVDVDLNLLKNLHEHGSVRILKDRRTDLYQINKTK CCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCEEEECCCC >Mature Secondary Structure MEFIFAIFEINRTYMQTEIKKVELRNLAFEDYKQLKNSMVESYPEMANSYWRSNDIKKLL CCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SIFPEGQLVILVDGVVVGSALSLIVDEKLVDKRHNYRQIIGDYTFSTHNPDGEILYGIDV HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE FIHPNYRGLRLGRRLYDARKELCEQLNLKAIVFAGRIPNYNQYSKKLSPRNYIEKVKDKE EECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHCCCH LHDPVLSFQLSNDFHVLRIIKNYLEGDEESKEFAVLLEWNNVYYDESPKLINSEKSIIRL HCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHH GLIQWQMRQLNNVEALFEQAEFFIDVVSGYGSDFALFPELFTAPLMADFNHLSEAEAIRE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH LARHSDPIRKRFQEFAISYNINIITGSMPHLENGILYNVGFLCKRDGTSEMYYKIHITPN HHHCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEECEEEECCCCCEEEEEEEEEHH EVHHWGMKGGSEFKTYDTDCGKIGILICYDVEFPELSRLLADEGMNILFVPFLTDTQNAY HHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHH TRVKHCSQARAIENECYVAIAGCVGNLPKVNNMDIQYAQASVFTPSDFAFPSNGIKAEAT HHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCC PNTEMTLIVDVDLNLLKNLHEHGSVRILKDRRTDLYQINKTK CCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]