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The map label for this gene is pal [C]

Identifier: 146298626

GI number: 146298626

Start: 976463

End: 977593

Strand: Direct

Name: pal [C]

Synonym: Fjoh_0864

Alternate gene names: 146298626

Gene position: 976463-977593 (Clockwise)

Preceding gene: 146298625

Following gene: 146298627

Centisome position: 16.02

GC content: 34.66

Gene sequence:

>1131_bases
ATGAAAAAAATTGTTATTACTCTGGCGTTTGCTTTAGGGTTAATTCATGTAAATGCACAAACAGAAAGCTCTGCAAATAG
CTATAACAAGTGGTCTGTAGAACTTGCGGGAGGATTAACTAAACCTCAAAGACCATTCTCTGCAGGTTACACTACCGCTA
CTCCAAGCCCATGGGTTGGTGATTTAGGTGTTCGTTACATGTTTAACAACAAATTTGGTTTGAAGGCTGATTTTGGATAC
AACAGTTTTACTGCAAAAAGCAGTTCTATAGATTTTGATTCAAGATACTATAGAGTAGATTTACAAGCTGTTGCCAACTT
AGGCCGTATCATGAACTTTGAAACCTGGACTAACACTTTTGGTTTATTAGGACATGCAGGTTTTGGTTATGCTCAATTAA
GAAGTGACAACTTCAGAGGAGCAGATGAAATGGGTAACTTTATTGCTGGTGTAACAGGACAAATAAAATTATCTAACCGA
GTAGCTTTAACTGGAGATTTCTCTACAATCTTAAATGCATCTCAGGATCATACTTTTGATGGAGCTTATCTTGCTGGGAA
CAGAGGTTATTCTGGGTTAATATTCAATGGTACAGTTGGTTTAAACGTTTACTTAGGTAAAAACACTAAACATGCTGACT
GGACTGTAGTTTCTGAAAATGTAGACCTTAGTGCTTACGATAACAGAATTGCTGATCTTGAAAACCAAATCAAGAATATA
CCATCAAAACAAGTTGTTGTAGAAAAACCAGTTAACAACACTACTGTTGTAAACGATAAAGATGTTGTAAAAGAATTAAT
AAACGATAAATATTACAGCGTTTATTTTGATTTCAACAAAGCAACTCCTATCGAAAACTCAACTGCTGCAATCGATGTGG
TTTTAACTTACTTAAGAAAAAACCCTTCTGCATCTCTTGACATTATTGGTTATGCTGATCAGGTTGGAAAAGCAGAATAC
AATGAAAAACTTTCAAACCAAAGAGCAGAAAATGTAAAAACTATCTTTGAAAAAGCTGGAATTGCATCTTCAAGATTAAA
CGTTATTCCTGCTGGTGCAGATACTTCAATCCAAAAAGATTCAGAAGAAGCTAGAAGATTAGCTAGAAGAGTTACTTTTA
AAGTAAAATAA

Upstream 100 bases:

>100_bases
TACAAATTTACCTTATTTTGATACTCTAATACCTTTTAGGGGACGTCTTAAGCAGTAATAAATTCGTTGGTTTGGGGAAA
ATTTTAAAACTCATATTACA

Downstream 100 bases:

>100_bases
TTCTTTTTGATAATTAAAAATCAAGTCCTTAAGAGATTTCTTAAGGACTTTTTTTATCTCTTTAAAGTTCAAATCAAACC
CTATTATCGCGATATGATTC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Family Protein; OmpA/MotB

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKKIVITLAFALGLIHVNAQTESSANSYNKWSVELAGGLTKPQRPFSAGYTTATPSPWVGDLGVRYMFNNKFGLKADFGY
NSFTAKSSSIDFDSRYYRVDLQAVANLGRIMNFETWTNTFGLLGHAGFGYAQLRSDNFRGADEMGNFIAGVTGQIKLSNR
VALTGDFSTILNASQDHTFDGAYLAGNRGYSGLIFNGTVGLNVYLGKNTKHADWTVVSENVDLSAYDNRIADLENQIKNI
PSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRKNPSASLDIIGYADQVGKAEY
NEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQKDSEEARRLARRVTFKVK

Sequences:

>Translated_376_residues
MKKIVITLAFALGLIHVNAQTESSANSYNKWSVELAGGLTKPQRPFSAGYTTATPSPWVGDLGVRYMFNNKFGLKADFGY
NSFTAKSSSIDFDSRYYRVDLQAVANLGRIMNFETWTNTFGLLGHAGFGYAQLRSDNFRGADEMGNFIAGVTGQIKLSNR
VALTGDFSTILNASQDHTFDGAYLAGNRGYSGLIFNGTVGLNVYLGKNTKHADWTVVSENVDLSAYDNRIADLENQIKNI
PSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRKNPSASLDIIGYADQVGKAEY
NEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQKDSEEARRLARRVTFKVK
>Mature_376_residues
MKKIVITLAFALGLIHVNAQTESSANSYNKWSVELAGGLTKPQRPFSAGYTTATPSPWVGDLGVRYMFNNKFGLKADFGY
NSFTAKSSSIDFDSRYYRVDLQAVANLGRIMNFETWTNTFGLLGHAGFGYAQLRSDNFRGADEMGNFIAGVTGQIKLSNR
VALTGDFSTILNASQDHTFDGAYLAGNRGYSGLIFNGTVGLNVYLGKNTKHADWTVVSENVDLSAYDNRIADLENQIKNI
PSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRKNPSASLDIIGYADQVGKAEY
NEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQKDSEEARRLARRVTFKVK

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41412; Mature: 41412

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVITLAFALGLIHVNAQTESSANSYNKWSVELAGGLTKPQRPFSAGYTTATPSPWVG
CCEEEEEEEEHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DLGVRYMFNNKFGLKADFGYNSFTAKSSSIDFDSRYYRVDLQAVANLGRIMNFETWTNTF
CCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHEECHHHHHHH
GLLGHAGFGYAQLRSDNFRGADEMGNFIAGVTGQIKLSNRVALTGDFSTILNASQDHTFD
HHHCCCCCCEEEECCCCCCCHHHHCHHHCCCEEEEEECCEEEEEECHHHHHCCCCCCCCC
GAYLAGNRGYSGLIFNGTVGLNVYLGKNTKHADWTVVSENVDLSAYDNRIADLENQIKNI
CEEEECCCCCCEEEEECEEEEEEEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHCC
PSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRK
CCCCEEEECCCCCCEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC
NPSASLDIIGYADQVGKAEYNEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQKD
CCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
SEEARRLARRVTFKVK
HHHHHHHHHHCEEEEC
>Mature Secondary Structure
MKKIVITLAFALGLIHVNAQTESSANSYNKWSVELAGGLTKPQRPFSAGYTTATPSPWVG
CCEEEEEEEEHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DLGVRYMFNNKFGLKADFGYNSFTAKSSSIDFDSRYYRVDLQAVANLGRIMNFETWTNTF
CCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHEECHHHHHHH
GLLGHAGFGYAQLRSDNFRGADEMGNFIAGVTGQIKLSNRVALTGDFSTILNASQDHTFD
HHHCCCCCCEEEECCCCCCCHHHHCHHHCCCEEEEEECCEEEEEECHHHHHCCCCCCCCC
GAYLAGNRGYSGLIFNGTVGLNVYLGKNTKHADWTVVSENVDLSAYDNRIADLENQIKNI
CEEEECCCCCCEEEEECEEEEEEEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHCC
PSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRK
CCCCEEEECCCCCCEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC
NPSASLDIIGYADQVGKAEYNEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQKD
CCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
SEEARRLARRVTFKVK
HHHHHHHHHHCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA