| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298624
Identifier: 146298624
GI number: 146298624
Start: 975014
End: 975721
Strand: Direct
Name: 146298624
Synonym: Fjoh_0862
Alternate gene names: NA
Gene position: 975014-975721 (Clockwise)
Preceding gene: 146298623
Following gene: 146298625
Centisome position: 15.99
GC content: 35.17
Gene sequence:
>708_bases ATGTTACATAAAACCAAAATACCAAACTTAAAAGTAATCGCATTTGATGCCGATGATACTTTATTTGTAAACGAACCTTA TTTTCAGGAAACCGAACATAAGTTTTGCGCTTTGATGGAAGATTATCTTTCGCATCAGGGCATTTCGCAGGAATTATTCA AAATCGAAATTGCTAATCTGCCTTTGTACGGTTACGGAATTAAAGGCTATATTCTTTCGATGATCGAAGCCGCAATGAAT ATTTCAAACAATACGATTCCGGTTGAAGTAATTGAAAAGATTATTCAGTACGGAAAGGAATTACTCGAAAAACCAATCGA ACTTCTTGACGGAATCGAAGAAACCTTACAGGCTTTACACGGAAAATACAAATTGGTCGTAGCAACAAAAGGCGACTTAA AAGACCAGCACAGCAAATTGCACCGCTCTGGTTTAGGTCATTATTTTCACCATATCGAAGTAATGTCAGACAAACAGGAA ATCGATTATCAAAAATTACTGGGACGTTTAGACATTCAGGCCAATGAGTTTTTAATGATAGGCAATTCATTAAAATCAGA TGTACTGCCTGTTTTAGGAATTGGCGGTTATGCTGTTCATATTCCGTTTCACACAACTTGGGAACACGAAAAAATCAATC ACAAAGTTGAACACAAACACTTTAGTTCATTTGAAAAAATTACTGAGGTGGTTCATAATTTATTATAA
Upstream 100 bases:
>100_bases AAAAATTAGTGCAATTCGTGAATTGCTTCGCCTGTTCACTATCGCTCGGGTCGTGGCGAAAAATAAACCTGAAACAAACA AAACTTGAAACAAAAAACTT
Downstream 100 bases:
>100_bases TGAAAACACTTTTAGACTTAGAAAACTGGAACCGTAAAGAGCATTTTGAACATTTCTGCCGAATGGAAGAACCATTTTTT GGCGTAACTGTCGAAATTGA
Product: hydrolase
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Haloacid Dehalogenase Family Protein; Haloacid Dehalogenase Family Hydrolase; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLHKTKIPNLKVIAFDADDTLFVNEPYFQETEHKFCALMEDYLSHQGISQELFKIEIANLPLYGYGIKGYILSMIEAAMN ISNNTIPVEVIEKIIQYGKELLEKPIELLDGIEETLQALHGKYKLVVATKGDLKDQHSKLHRSGLGHYFHHIEVMSDKQE IDYQKLLGRLDIQANEFLMIGNSLKSDVLPVLGIGGYAVHIPFHTTWEHEKINHKVEHKHFSSFEKITEVVHNLL
Sequences:
>Translated_235_residues MLHKTKIPNLKVIAFDADDTLFVNEPYFQETEHKFCALMEDYLSHQGISQELFKIEIANLPLYGYGIKGYILSMIEAAMN ISNNTIPVEVIEKIIQYGKELLEKPIELLDGIEETLQALHGKYKLVVATKGDLKDQHSKLHRSGLGHYFHHIEVMSDKQE IDYQKLLGRLDIQANEFLMIGNSLKSDVLPVLGIGGYAVHIPFHTTWEHEKINHKVEHKHFSSFEKITEVVHNLL >Mature_235_residues MLHKTKIPNLKVIAFDADDTLFVNEPYFQETEHKFCALMEDYLSHQGISQELFKIEIANLPLYGYGIKGYILSMIEAAMN ISNNTIPVEVIEKIIQYGKELLEKPIELLDGIEETLQALHGKYKLVVATKGDLKDQHSKLHRSGLGHYFHHIEVMSDKQE IDYQKLLGRLDIQANEFLMIGNSLKSDVLPVLGIGGYAVHIPFHTTWEHEKINHKVEHKHFSSFEKITEVVHNLL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26972; Mature: 26972
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHKTKIPNLKVIAFDADDTLFVNEPYFQETEHKFCALMEDYLSHQGISQELFKIEIANL CCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCC PLYGYGIKGYILSMIEAAMNISNNTIPVEVIEKIIQYGKELLEKPIELLDGIEETLQALH CEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKYKLVVATKGDLKDQHSKLHRSGLGHYFHHIEVMSDKQEIDYQKLLGRLDIQANEFLMI CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCEEEE GNSLKSDVLPVLGIGGYAVHIPFHTTWEHEKINHKVEHKHFSSFEKITEVVHNLL CCCHHHCCCHHEECCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLHKTKIPNLKVIAFDADDTLFVNEPYFQETEHKFCALMEDYLSHQGISQELFKIEIANL CCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCC PLYGYGIKGYILSMIEAAMNISNNTIPVEVIEKIIQYGKELLEKPIELLDGIEETLQALH CEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKYKLVVATKGDLKDQHSKLHRSGLGHYFHHIEVMSDKQEIDYQKLLGRLDIQANEFLMI CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCEEEE GNSLKSDVLPVLGIGGYAVHIPFHTTWEHEKINHKVEHKHFSSFEKITEVVHNLL CCCHHHCCCHHEECCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA