| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298525
Identifier: 146298525
GI number: 146298525
Start: 839086
End: 841761
Strand: Direct
Name: 146298525
Synonym: Fjoh_0763
Alternate gene names: NA
Gene position: 839086-841761 (Clockwise)
Preceding gene: 146298524
Following gene: 146298526
Centisome position: 13.76
GC content: 34.79
Gene sequence:
>2676_bases GTGCGCTACATTATAATTTTCTTACTGTTCACTCAAACAATTTTTTCTCAAAAAACCATTTCCGGTACAATTTTGTCGAA AGAAACATCTACATCTTTATCTGGTGTTTTTGTTCGTGATACCAAAACAGAAAACTGGACGATTTCTGATAAAGATGGAA ATTTCACTATTACACTTCCTTACTTTCAGGACATTGAGTTAAATTTTTCGATACTTGGAAAAAAAGAAATTAATCAATCA CTAAAAGACGGGCAGAACTCTATTACTGTTTATTTAGAAGATAATACGCTTCATCTTAAGGAAGTAATGGTTACGGCCAA TAAAGAGCGTAAATATTCTGAATTAACCTTAGGAACAAATGCCATAAATAACGTTCAGGCTTTTTCTCTAGATGATGTTT TACAACAGCTTCCGGGGCAAAAAACCGCAGATTTTACTTTGAATGAATATAAAAATATTGTTTTTCGTACGGCATCTGAT GGTAATTCTTCAAAAGGCAGCAAAGCGTTTGGAACTTCATTTGTAATAAATGATATTCCAATTTCGAACAATGAAAATAT GCAGGCACTTAGTCCAAATACACCTACTTTGGCCGGCAATGATTATGGCATTCGTAATAAAGTTTTTAATAACCCAAATG TCGGGGTTGATCTTAGGGAAATTCCAACTAATACTATTGAGGAGATAAAAGTCATTCAGGGAATTCCTTCTGCAAAATAT GGAGATTTGACTTCAGGACTTGTTTTGATAACGACTAAAGTTGGAAACAGTCCGTACAGAGTTTCTGCTTCTATTAGAGA TGCTACAAGTGAATTGAATTTAACCAAAGGCATTAAATTGGATTCAAGAAACTCCATGAATTTTGGAATTAACTATTTAG ATTCTAAAGCAGACCCTAGAGACAATTTATTGAATTATCAGCGCATCAGCGGAAGTTTTGCCTGGAAAACTACAGATAAA CTTTCTAAAATAAAAAATACCCTGAATTTATCCGTTAGATCAAACCTAGATGATGCAAAACATGATCCGGATAATATTAC GGCAGATGTTGTAAAAAATGAAAAGCAGGGTTTTTCGATTTCTAACAACTTAATGTGGAAACCTTCAAACATTTGGCTGG ATGGTATAAACATAAACAGCGGTTTCTCTTATGACAGGCAGTTTTCCAGAAAAGAAAGATGGATAAATCGATCTTTAACC GCTGCAACTGATTCTAAAGAAGAAGGAATTCATGAAGCTTTCGTTATTCCGTCTCAATATACCAGTATGAGCACAGTCGA AGGTATTCCAATTTCTACTTTTGTGAATCTTGAAACCACTAAAACCCTTACTACTACAACCAATTGGGTACACAGTATTT CATTTGGACTATCAGGAAGATCAAGTTCAAACAAAGGAGAAGGCAGAAAAAGCAGCGCAACGGGTTTAATAAATTTTTAT GTTCTTGCTGAAGGAGGCGACAGCAAGCTGGGCTATAGAGACTATGATTTTAACAGAACCCGAACTGAAACTCAGTTTTC TGGTTATCTGGAGGACAGAGTATATAAAAAATTTGAAAAAGATAAAATCCTGAATATTGATTACGGAATTAGATATGAAA ATCAGTCTGGTAACGTATCCCTACAACCGCGTATTAATTCCTCTTATTCTCTAAACAAAACTTTTAGAGTCCGCGGCGGG TTTGGATTATCGTCTAAAGCTCCTTCGCTTAATCAATTATATACTGGAGAACGCTACTTAGACCGATTATTGGGCAGCGG AATTTACAGCTATCCCGGTGTTTATCAAAAAGCATGGATTTTAACTGTAGTCAGCCCTGGTGATAACCTCAATTTAAAAC CTTCTAAGTCATTGAAAACGGAAGGCGGAATCGATATTGATCTTCCATTTGCCAATATAAATCTAACGGGATATTATAAC AAACTGACGAATGGTTTTACAGGCCAGCAGGTTCCTGTTTCGAAAGAAATCCCACAAGCAAATGTAATTACAAACGGAAC AGAAATTCCAACGTATGAGATTGTTGGCACAGCAAAACTGTATTACCTAACCAACAGCATTCAAAACAATACAAATTCTG AAGATATGGGTATTGAAACGATAATAAATTTCCGCAAGATCAAAGCATTAAATCTGGATGTCAGCATGAATGCCTCTTAT GTAAAGACTAATGATAATAGTAAGTCTATTAATTATTATGCTTCTACAAATTTGTTATCTGCAGAAAAATACGGCGTATT TCCTTCAATGCCAACAACAAACGAAAACTTTACAGCAAGTTTCAATTTTAGTTATCATATTCCCAAAGCAGGTTTATTGC TGTCCTTGAGAAGCGAGCATACTATATTACGTACTTCCTACATTCCTACGAGTGAGTTTCCAAATGGTTATTTAGATGCG ACATTGACTTACCACGAAATTCCGCAGGAAGAACGTAGTGATTTACAAAAATACGGTCACATTATTCGAACTATAAAAGG TACTCAAACCAAGCTTGAGGATGTGCTGCACAATTTTCATCTGCGCATTTCTAAAGATTTCTTAAACGGATTTAGTGTTT CCTTTTATTCTACCAATTTTTTAAATCTAAAACCTTATTACGACAAAGACAATTTAAGAACCATGTATGACATTGCAAAC TTTTCGTTTGGAACACGACTTAATTATCAATTTTAA
Upstream 100 bases:
>100_bases ACTTATACTCTATTTTACAATTCCTTTATTTTTCATTGCTTCGCAAAGAATTATCAATAGATTTGCATCATTATTTTTAT TTGTTCTAAATTAAATATAG
Downstream 100 bases:
>100_bases ATCTATATACTATGAAAAAAACGCTCTCTATTTTTATAATACTCTTTGGATTAATTATCCAGTCTTGCAGCAATGACAAT AACGAAAGTGAAGCATTAAA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MRYIIIFLLFTQTIFSQKTISGTILSKETSTSLSGVFVRDTKTENWTISDKDGNFTITLPYFQDIELNFSILGKKEINQS LKDGQNSITVYLEDNTLHLKEVMVTANKERKYSELTLGTNAINNVQAFSLDDVLQQLPGQKTADFTLNEYKNIVFRTASD GNSSKGSKAFGTSFVINDIPISNNENMQALSPNTPTLAGNDYGIRNKVFNNPNVGVDLREIPTNTIEEIKVIQGIPSAKY GDLTSGLVLITTKVGNSPYRVSASIRDATSELNLTKGIKLDSRNSMNFGINYLDSKADPRDNLLNYQRISGSFAWKTTDK LSKIKNTLNLSVRSNLDDAKHDPDNITADVVKNEKQGFSISNNLMWKPSNIWLDGININSGFSYDRQFSRKERWINRSLT AATDSKEEGIHEAFVIPSQYTSMSTVEGIPISTFVNLETTKTLTTTTNWVHSISFGLSGRSSSNKGEGRKSSATGLINFY VLAEGGDSKLGYRDYDFNRTRTETQFSGYLEDRVYKKFEKDKILNIDYGIRYENQSGNVSLQPRINSSYSLNKTFRVRGG FGLSSKAPSLNQLYTGERYLDRLLGSGIYSYPGVYQKAWILTVVSPGDNLNLKPSKSLKTEGGIDIDLPFANINLTGYYN KLTNGFTGQQVPVSKEIPQANVITNGTEIPTYEIVGTAKLYYLTNSIQNNTNSEDMGIETIINFRKIKALNLDVSMNASY VKTNDNSKSINYYASTNLLSAEKYGVFPSMPTTNENFTASFNFSYHIPKAGLLLSLRSEHTILRTSYIPTSEFPNGYLDA TLTYHEIPQEERSDLQKYGHIIRTIKGTQTKLEDVLHNFHLRISKDFLNGFSVSFYSTNFLNLKPYYDKDNLRTMYDIAN FSFGTRLNYQF
Sequences:
>Translated_891_residues MRYIIIFLLFTQTIFSQKTISGTILSKETSTSLSGVFVRDTKTENWTISDKDGNFTITLPYFQDIELNFSILGKKEINQS LKDGQNSITVYLEDNTLHLKEVMVTANKERKYSELTLGTNAINNVQAFSLDDVLQQLPGQKTADFTLNEYKNIVFRTASD GNSSKGSKAFGTSFVINDIPISNNENMQALSPNTPTLAGNDYGIRNKVFNNPNVGVDLREIPTNTIEEIKVIQGIPSAKY GDLTSGLVLITTKVGNSPYRVSASIRDATSELNLTKGIKLDSRNSMNFGINYLDSKADPRDNLLNYQRISGSFAWKTTDK LSKIKNTLNLSVRSNLDDAKHDPDNITADVVKNEKQGFSISNNLMWKPSNIWLDGININSGFSYDRQFSRKERWINRSLT AATDSKEEGIHEAFVIPSQYTSMSTVEGIPISTFVNLETTKTLTTTTNWVHSISFGLSGRSSSNKGEGRKSSATGLINFY VLAEGGDSKLGYRDYDFNRTRTETQFSGYLEDRVYKKFEKDKILNIDYGIRYENQSGNVSLQPRINSSYSLNKTFRVRGG FGLSSKAPSLNQLYTGERYLDRLLGSGIYSYPGVYQKAWILTVVSPGDNLNLKPSKSLKTEGGIDIDLPFANINLTGYYN KLTNGFTGQQVPVSKEIPQANVITNGTEIPTYEIVGTAKLYYLTNSIQNNTNSEDMGIETIINFRKIKALNLDVSMNASY VKTNDNSKSINYYASTNLLSAEKYGVFPSMPTTNENFTASFNFSYHIPKAGLLLSLRSEHTILRTSYIPTSEFPNGYLDA TLTYHEIPQEERSDLQKYGHIIRTIKGTQTKLEDVLHNFHLRISKDFLNGFSVSFYSTNFLNLKPYYDKDNLRTMYDIAN FSFGTRLNYQF >Mature_891_residues MRYIIIFLLFTQTIFSQKTISGTILSKETSTSLSGVFVRDTKTENWTISDKDGNFTITLPYFQDIELNFSILGKKEINQS LKDGQNSITVYLEDNTLHLKEVMVTANKERKYSELTLGTNAINNVQAFSLDDVLQQLPGQKTADFTLNEYKNIVFRTASD GNSSKGSKAFGTSFVINDIPISNNENMQALSPNTPTLAGNDYGIRNKVFNNPNVGVDLREIPTNTIEEIKVIQGIPSAKY GDLTSGLVLITTKVGNSPYRVSASIRDATSELNLTKGIKLDSRNSMNFGINYLDSKADPRDNLLNYQRISGSFAWKTTDK LSKIKNTLNLSVRSNLDDAKHDPDNITADVVKNEKQGFSISNNLMWKPSNIWLDGININSGFSYDRQFSRKERWINRSLT AATDSKEEGIHEAFVIPSQYTSMSTVEGIPISTFVNLETTKTLTTTTNWVHSISFGLSGRSSSNKGEGRKSSATGLINFY VLAEGGDSKLGYRDYDFNRTRTETQFSGYLEDRVYKKFEKDKILNIDYGIRYENQSGNVSLQPRINSSYSLNKTFRVRGG FGLSSKAPSLNQLYTGERYLDRLLGSGIYSYPGVYQKAWILTVVSPGDNLNLKPSKSLKTEGGIDIDLPFANINLTGYYN KLTNGFTGQQVPVSKEIPQANVITNGTEIPTYEIVGTAKLYYLTNSIQNNTNSEDMGIETIINFRKIKALNLDVSMNASY VKTNDNSKSINYYASTNLLSAEKYGVFPSMPTTNENFTASFNFSYHIPKAGLLLSLRSEHTILRTSYIPTSEFPNGYLDA TLTYHEIPQEERSDLQKYGHIIRTIKGTQTKLEDVLHNFHLRISKDFLNGFSVSFYSTNFLNLKPYYDKDNLRTMYDIAN FSFGTRLNYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100122; Mature: 100122
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYIIIFLLFTQTIFSQKTISGTILSKETSTSLSGVFVRDTKTENWTISDKDGNFTITLP CEEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEC YFQDIELNFSILGKKEINQSLKDGQNSITVYLEDNTLHLKEVMVTANKERKYSELTLGTN CEEEEEEEEEEECHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCC AINNVQAFSLDDVLQQLPGQKTADFTLNEYKNIVFRTASDGNSSKGSKAFGTSFVINDIP CCCCEEEECHHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC ISNNENMQALSPNTPTLAGNDYGIRNKVFNNPNVGVDLREIPTNTIEEIKVIQGIPSAKY CCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHHHCCCCCCC GDLTSGLVLITTKVGNSPYRVSASIRDATSELNLTKGIKLDSRNSMNFGINYLDSKADPR CCCCCCEEEEEEECCCCCEEEEEEHHHCHHHCCCCCCEEECCCCCCCCCEEEECCCCCCH DNLLNYQRISGSFAWKTTDKLSKIKNTLNLSVRSNLDDAKHDPDNITADVVKNEKQGFSI HHCCCCEECCCEEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEE SNNLMWKPSNIWLDGININSGFSYDRQFSRKERWINRSLTAATDSKEEGIHEAFVIPSQY CCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCHHCCCEEEEEECCCC TSMSTVEGIPISTFVNLETTKTLTTTTNWVHSISFGLSGRSSSNKGEGRKSSATGLINFY CCCCCCCCCCEEEEEEEEECEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE VLAEGGDSKLGYRDYDFNRTRTETQFSGYLEDRVYKKFEKDKILNIDYGIRYENQSGNVS EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEE LQPRINSSYSLNKTFRVRGGFGLSSKAPSLNQLYTGERYLDRLLGSGIYSYPGVYQKAWI EEECCCCCEECCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEE LTVVSPGDNLNLKPSKSLKTEGGIDIDLPFANINLTGYYNKLTNGFTGQQVPVSKEIPQA EEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHCCCCCCCCCCCCCCCCCC NVITNGTEIPTYEIVGTAKLYYLTNSIQNNTNSEDMGIETIINFRKIKALNLDVSMNASY CEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCEEEEEEEEEEEECCCEE VKTNDNSKSINYYASTNLLSAEKYGVFPSMPTTNENFTASFNFSYHIPKAGLLLSLRSEH EEECCCCCEEEEEEECCEECHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCC TILRTSYIPTSEFPNGYLDATLTYHEIPQEERSDLQKYGHIIRTIKGTQTKLEDVLHNFH EEEEEECCCCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE LRISKDFLNGFSVSFYSTNFLNLKPYYDKDNLRTMYDIANFSFGTRLNYQF EEEEHHHCCCEEEEEEEEEEEEECCCCCCCCCEEEEEHHCCCCCCEEEECC >Mature Secondary Structure MRYIIIFLLFTQTIFSQKTISGTILSKETSTSLSGVFVRDTKTENWTISDKDGNFTITLP CEEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEC YFQDIELNFSILGKKEINQSLKDGQNSITVYLEDNTLHLKEVMVTANKERKYSELTLGTN CEEEEEEEEEEECHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEECCCCCCEEEEEECCC AINNVQAFSLDDVLQQLPGQKTADFTLNEYKNIVFRTASDGNSSKGSKAFGTSFVINDIP CCCCEEEECHHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC ISNNENMQALSPNTPTLAGNDYGIRNKVFNNPNVGVDLREIPTNTIEEIKVIQGIPSAKY CCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHHHCCCCCCC GDLTSGLVLITTKVGNSPYRVSASIRDATSELNLTKGIKLDSRNSMNFGINYLDSKADPR CCCCCCEEEEEEECCCCCEEEEEEHHHCHHHCCCCCCEEECCCCCCCCCEEEECCCCCCH DNLLNYQRISGSFAWKTTDKLSKIKNTLNLSVRSNLDDAKHDPDNITADVVKNEKQGFSI HHCCCCEECCCEEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEE SNNLMWKPSNIWLDGININSGFSYDRQFSRKERWINRSLTAATDSKEEGIHEAFVIPSQY CCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCHHCCCEEEEEECCCC TSMSTVEGIPISTFVNLETTKTLTTTTNWVHSISFGLSGRSSSNKGEGRKSSATGLINFY CCCCCCCCCCEEEEEEEEECEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE VLAEGGDSKLGYRDYDFNRTRTETQFSGYLEDRVYKKFEKDKILNIDYGIRYENQSGNVS EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEE LQPRINSSYSLNKTFRVRGGFGLSSKAPSLNQLYTGERYLDRLLGSGIYSYPGVYQKAWI EEECCCCCEECCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEE LTVVSPGDNLNLKPSKSLKTEGGIDIDLPFANINLTGYYNKLTNGFTGQQVPVSKEIPQA EEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHCCCCCCCCCCCCCCCCCC NVITNGTEIPTYEIVGTAKLYYLTNSIQNNTNSEDMGIETIINFRKIKALNLDVSMNASY CEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCEEEEEEEEEEEECCCEE VKTNDNSKSINYYASTNLLSAEKYGVFPSMPTTNENFTASFNFSYHIPKAGLLLSLRSEH EEECCCCCEEEEEEECCEECHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCC TILRTSYIPTSEFPNGYLDATLTYHEIPQEERSDLQKYGHIIRTIKGTQTKLEDVLHNFH EEEEEECCCCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE LRISKDFLNGFSVSFYSTNFLNLKPYYDKDNLRTMYDIANFSFGTRLNYQF EEEEHHHCCCEEEEEEEEEEEEECCCCCCCCCEEEEEHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA