| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298506
Identifier: 146298506
GI number: 146298506
Start: 820082
End: 820447
Strand: Direct
Name: 146298506
Synonym: Fjoh_0743
Alternate gene names: NA
Gene position: 820082-820447 (Clockwise)
Preceding gene: 146298505
Following gene: 146298507
Centisome position: 13.45
GC content: 28.42
Gene sequence:
>366_bases ATGAGCGGTATTAAATCTTACAAAGAGTTATTCATTTGGCAAAAAGGAATTAAACTAGTTGTTCTTGTTTATAAACTTAC TAAGAACTTTCCTAAAGAAGAAATATATGCCTTGACAAGTCAATTAAAAAGAGCCAGTGTATCTATTCCGTCGAATATTG CAGAAGGTTTTGGACGCCAAACTGACAAATCATTTAATCATTTTTTGAATATTTCCAGAGGTTCTTTAAATGAAATAGAA ACACAATTAATTATTGCAAAAGAGTTAGAATTTATTTCTGACGAAAGCCTATTTAATGAAATTATGTTTTTAATTGAAGA AGAGAGCAAAATGATAAGTGCTTTCGCTAAAAATCTAAAAGACTAA
Upstream 100 bases:
>100_bases GAAGAAGCACATCAACTGGTAAAGGATTTTGTATCTAAGTAGTTATTTAGTCATTAGTTGTTAGTCCTTAGTCTGAAACA CATCAAGCTAAAAATTTTAC
Downstream 100 bases:
>100_bases GGACTAAGAACTAAGTACTATAATAAATGAAAATAGGTCTTTACTTCGGAACATACAATCCTATTCATGTTGGTCATTTG ATCATTGCCAATCACATGGC
Product: S23 ribosomal protein
Products: NA
Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; Small Subunit Ribosomal E; Intervening Sequence
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSGIKSYKELFIWQKGIKLVVLVYKLTKNFPKEEIYALTSQLKRASVSIPSNIAEGFGRQTDKSFNHFLNISRGSLNEIE TQLIIAKELEFISDESLFNEIMFLIEEESKMISAFAKNLKD
Sequences:
>Translated_121_residues MSGIKSYKELFIWQKGIKLVVLVYKLTKNFPKEEIYALTSQLKRASVSIPSNIAEGFGRQTDKSFNHFLNISRGSLNEIE TQLIIAKELEFISDESLFNEIMFLIEEESKMISAFAKNLKD >Mature_120_residues SGIKSYKELFIWQKGIKLVVLVYKLTKNFPKEEIYALTSQLKRASVSIPSNIAEGFGRQTDKSFNHFLNISRGSLNEIET QLIIAKELEFISDESLFNEIMFLIEEESKMISAFAKNLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13913; Mature: 13782
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIKSYKELFIWQKGIKLVVLVYKLTKNFPKEEIYALTSQLKRASVSIPSNIAEGFGRQ CCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCC TDKSFNHFLNISRGSLNEIETQLIIAKELEFISDESLFNEIMFLIEEESKMISAFAKNLK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC D C >Mature Secondary Structure SGIKSYKELFIWQKGIKLVVLVYKLTKNFPKEEIYALTSQLKRASVSIPSNIAEGFGRQ CHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCC TDKSFNHFLNISRGSLNEIETQLIIAKELEFISDESLFNEIMFLIEEESKMISAFAKNLK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA