Click here to switch to the map view.

The map label for this gene is yloC [H]

Identifier: 146298504

GI number: 146298504

Start: 818521

End: 819381

Strand: Direct

Name: yloC [H]

Synonym: Fjoh_0741

Alternate gene names: 146298504

Gene position: 818521-819381 (Clockwise)

Preceding gene: 146298503

Following gene: 146298505

Centisome position: 13.43

GC content: 33.8

Gene sequence:

>861_bases
ATGATACAATCTATGACAGGGTTTGGCAAAGCTTCTTTGCAATTGCCTACAAAAAAAATTACCGTTGAAGTAAAATCTTT
AAACAGCAAAGGTTTAGATTTAAACGTAAGAATGCCGTCTGTTTACCGTGAAATGGAATTAGGTTTAAGAACTCAAATCT
CAACTAAACTTGAAAGAGGCAAAATTGATTTTGCAATTTACATAGAGAGTACTGCCGAACAAACTTCAACAAAAGTAAAT
GTTCCTGTTGTGAAGAATTATATCGCACAATTGAGAGAGGTTTATGCCGATGCCGATGAAACTGAATTAATGAAAATGGC
TGTTCGTATGCCGGATACATTAAAAACAGAACGCGAAGAAATCGATGAAAATGACTGGGAACAAATTCAGGTTATTATTG
ATGAAGCTTTACAAAACATTTTAAGTTTTAGAAAAGACGAAGGCGAATCTCTTGAAAAAGAATTTAATCTCAGAATTGGA
AATATCCGCCAGTATATGAATGATGCTTTGGCCCTTGATCCAGAACGTGTTCAGGCAATTAAAGATCGTTTACAAACTGC
AATTTCAGAACTACAGGTAAATGTTGATGAAAATCGTTTCGAGCAGGAATTAATTTATTATCTGGAAAAACTGGATATTA
CCGAAGAAAAAGTACGCTTAACCAATCATTTAGATTATTTCTTAGAAACTTTAAACGGAAATGAAGCAAATGGTCGTAAA
CTAGGTTTTATTACTCAGGAAATGGGCCGCGAAATCAATACTATGGGTTCAAAATCAAATCATGCCCAAATGCAGAAATT
GGTCGTGATGATGAAAGATGAATTAGAGAAGATTAAAGAACAAGTATTGAATGTGCTTTAA

Upstream 100 bases:

>100_bases
TCAATATTTTTTGTGTCAAACTGAAAACTATGACTGAACACTAATTTCCAATCAAATAGAGCAAACTTTTATTTATCTTT
GCGCCTTTATACTCAATTAT

Downstream 100 bases:

>100_bases
AGCTTAAAGCATAAATACCACACAAATATCAAGCTTAGAGCATATTGCTTAAAGCCTAAAGCATACACAATGAACAAAGG
AAAACTAATTGTTTTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIQSMTGFGKASLQLPTKKITVEVKSLNSKGLDLNVRMPSVYREMELGLRTQISTKLERGKIDFAIYIESTAEQTSTKVN
VPVVKNYIAQLREVYADADETELMKMAVRMPDTLKTEREEIDENDWEQIQVIIDEALQNILSFRKDEGESLEKEFNLRIG
NIRQYMNDALALDPERVQAIKDRLQTAISELQVNVDENRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLNGNEANGRK
LGFITQEMGREINTMGSKSNHAQMQKLVVMMKDELEKIKEQVLNVL

Sequences:

>Translated_286_residues
MIQSMTGFGKASLQLPTKKITVEVKSLNSKGLDLNVRMPSVYREMELGLRTQISTKLERGKIDFAIYIESTAEQTSTKVN
VPVVKNYIAQLREVYADADETELMKMAVRMPDTLKTEREEIDENDWEQIQVIIDEALQNILSFRKDEGESLEKEFNLRIG
NIRQYMNDALALDPERVQAIKDRLQTAISELQVNVDENRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLNGNEANGRK
LGFITQEMGREINTMGSKSNHAQMQKLVVMMKDELEKIKEQVLNVL
>Mature_286_residues
MIQSMTGFGKASLQLPTKKITVEVKSLNSKGLDLNVRMPSVYREMELGLRTQISTKLERGKIDFAIYIESTAEQTSTKVN
VPVVKNYIAQLREVYADADETELMKMAVRMPDTLKTEREEIDENDWEQIQVIIDEALQNILSFRKDEGESLEKEFNLRIG
NIRQYMNDALALDPERVQAIKDRLQTAISELQVNVDENRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLNGNEANGRK
LGFITQEMGREINTMGSKSNHAQMQKLVVMMKDELEKIKEQVLNVL

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=27.8745644599303, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33086; Mature: 33086

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSMTGFGKASLQLPTKKITVEVKSLNSKGLDLNVRMPSVYREMELGLRTQISTKLERG
CCCCCCCCCCCEEECCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCC
KIDFAIYIESTAEQTSTKVNVPVVKNYIAQLREVYADADETELMKMAVRMPDTLKTEREE
CEEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
IDENDWEQIQVIIDEALQNILSFRKDEGESLEKEFNLRIGNIRQYMNDALALDPERVQAI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
KDRLQTAISELQVNVDENRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLNGNEANGRK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
LGFITQEMGREINTMGSKSNHAQMQKLVVMMKDELEKIKEQVLNVL
EEHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQSMTGFGKASLQLPTKKITVEVKSLNSKGLDLNVRMPSVYREMELGLRTQISTKLERG
CCCCCCCCCCCEEECCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCC
KIDFAIYIESTAEQTSTKVNVPVVKNYIAQLREVYADADETELMKMAVRMPDTLKTEREE
CEEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
IDENDWEQIQVIIDEALQNILSFRKDEGESLEKEFNLRIGNIRQYMNDALALDPERVQAI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
KDRLQTAISELQVNVDENRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLNGNEANGRK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
LGFITQEMGREINTMGSKSNHAQMQKLVVMMKDELEKIKEQVLNVL
EEHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]