| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146298474
Identifier: 146298474
GI number: 146298474
Start: 784870
End: 785613
Strand: Direct
Name: 146298474
Synonym: Fjoh_0711
Alternate gene names: NA
Gene position: 784870-785613 (Clockwise)
Preceding gene: 146298472
Following gene: 146298478
Centisome position: 12.87
GC content: 29.44
Gene sequence:
>744_bases ATGAAAAATTACATATTTACAATCTTATTGTGTTTGATTTTTACAAGTTGCAAAAAAGAGCTTTCATTTGAGAATGAAAC ATTTGAAGAAAAATCTACTATTCCGTGCAAAAATGACTGTCCGGATATCACAATAGAAGTCCCAATTGCTAAAAATAAAA AGGTTGTTGCTGACAGTATAAACAAAAAGGTATTTACTGTCATAAAAGAAATTATATATTTTGGAGAAGATTCTACAAAA GTTAATGATTACAAATCATTATCAAAATCTTTTATTGCTTCTTATGAAGAAATGCACCAGAAATTTCCAAATGATACTTT TGGCTGGGAAGGAAAAATAACCGGAAATGTTGAGTTTGAATCAGAGCAGATTGTAAACATCAAAATAGATCATTACACTT TTACTGGTGGTGCTCACGGTTATCAAGGTTTTAGATCTTTATTATTTAACAGAAAAACAGGAAAATTCATTTTTAACAAA GACCTTTTTAAAAATGAGAAAGAATTTAAGGCTTTCGCCGAAAAAGAATTCAGAGCCAAGTATCACATTCCAGAAAAAGC AAATATAAATGCAACCGGACTGATGTTTGAAAATGATAAATTCCAATTATCTCAGAATATTTTTTACACTTCTGAAGGTT TGCTTTTATATTACAACTCTTATGAAGCAGCATCTTATGCAGATGGCCCAAAAGAAATCGTATTTCCATACGATAAAGTG AGCAAATATTTGAAATTTCAGTAA
Upstream 100 bases:
>100_bases TTATAAATTTTATTTCCTTAATTCTTTTACAAATTTACCTTTTAATTTATTTTATCGGGATACAACTTCTTACCTTTGTA GATAATTAACACTTTTTGAT
Downstream 100 bases:
>100_bases TTCAGACACGATAAAAAACTCAGAACCTTAGCCTCTCAGCAACTCAGAACCTTTATTGAACATCATATTTCATCTTTCTC AAAACCCTCAAAGCTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKNYIFTILLCLIFTSCKKELSFENETFEEKSTIPCKNDCPDITIEVPIAKNKKVVADSINKKVFTVIKEIIYFGEDSTK VNDYKSLSKSFIASYEEMHQKFPNDTFGWEGKITGNVEFESEQIVNIKIDHYTFTGGAHGYQGFRSLLFNRKTGKFIFNK DLFKNEKEFKAFAEKEFRAKYHIPEKANINATGLMFENDKFQLSQNIFYTSEGLLLYYNSYEAASYADGPKEIVFPYDKV SKYLKFQ
Sequences:
>Translated_247_residues MKNYIFTILLCLIFTSCKKELSFENETFEEKSTIPCKNDCPDITIEVPIAKNKKVVADSINKKVFTVIKEIIYFGEDSTK VNDYKSLSKSFIASYEEMHQKFPNDTFGWEGKITGNVEFESEQIVNIKIDHYTFTGGAHGYQGFRSLLFNRKTGKFIFNK DLFKNEKEFKAFAEKEFRAKYHIPEKANINATGLMFENDKFQLSQNIFYTSEGLLLYYNSYEAASYADGPKEIVFPYDKV SKYLKFQ >Mature_247_residues MKNYIFTILLCLIFTSCKKELSFENETFEEKSTIPCKNDCPDITIEVPIAKNKKVVADSINKKVFTVIKEIIYFGEDSTK VNDYKSLSKSFIASYEEMHQKFPNDTFGWEGKITGNVEFESEQIVNIKIDHYTFTGGAHGYQGFRSLLFNRKTGKFIFNK DLFKNEKEFKAFAEKEFRAKYHIPEKANINATGLMFENDKFQLSQNIFYTSEGLLLYYNSYEAASYADGPKEIVFPYDKV SKYLKFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28740; Mature: 28740
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYIFTILLCLIFTSCKKELSFENETFEEKSTIPCKNDCPDITIEVPIAKNKKVVADSI CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH NKKVFTVIKEIIYFGEDSTKVNDYKSLSKSFIASYEEMHQKFPNDTFGWEGKITGNVEFE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC SEQIVNIKIDHYTFTGGAHGYQGFRSLLFNRKTGKFIFNKDLFKNEKEFKAFAEKEFRAK CCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECHHHHCCHHHHHHHHHHHHHHE YHIPEKANINATGLMFENDKFQLSQNIFYTSEGLLLYYNSYEAASYADGPKEIVFPYDKV ECCCCCCCCCEEEEEEECCCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEECHHHH SKYLKFQ HHHHCCC >Mature Secondary Structure MKNYIFTILLCLIFTSCKKELSFENETFEEKSTIPCKNDCPDITIEVPIAKNKKVVADSI CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH NKKVFTVIKEIIYFGEDSTKVNDYKSLSKSFIASYEEMHQKFPNDTFGWEGKITGNVEFE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC SEQIVNIKIDHYTFTGGAHGYQGFRSLLFNRKTGKFIFNKDLFKNEKEFKAFAEKEFRAK CCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECHHHHCCHHHHHHHHHHHHHHE YHIPEKANINATGLMFENDKFQLSQNIFYTSEGLLLYYNSYEAASYADGPKEIVFPYDKV ECCCCCCCCCEEEEEEECCCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEECHHHH SKYLKFQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA