Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is nahA [H]

Identifier: 146298437

GI number: 146298437

Start: 737391

End: 739691

Strand: Direct

Name: nahA [H]

Synonym: Fjoh_0674

Alternate gene names: 146298437

Gene position: 737391-739691 (Clockwise)

Preceding gene: 146298435

Following gene: 146298441

Centisome position: 12.09

GC content: 35.46

Gene sequence:

>2301_bases
ATGCAAAAAAGTATATTTCTTCTTTTGATTTTCTGTTTCTCTTTCGGAAATGCGCAAAGTACTTGTGATAACACTTTGAT
AATTCCCGCTCCCAATTTTTATAAAACAAACGGAGACAGTATTCGTATAAACGGAAAAATCAAAATTGCATTCGACAAAA
ATACATACAGCGCAAAAGAATTAAAAACTGCACAAATTTTTGAGTCGGCAGTAAATGCTAATACACCAAATAAAAAAAGC
AATATTGAAGTTTTGTTTATTGCCGAAAAACCATCGCCAGCTTCAAAAAAAGAAGGCTATAAAATCAATATTTCTTCCAA
AAAAATAACCGTTACCGGAAGTGAAGAAGGATTATTTTATGCAGTTCAGAGTTTATTGCAGCTTTTGCCGAACCAGCCCA
AAAATCAGGAAATAAAATTACCCTTTGCAACTATCGAAGACGAGCCCAGATACGACTACCGCGGGCTTCACCTCGATGTG
TGCCGTCATTTTTTCTCGGTTAATGTTATAAAAGATTTTATCGCACAAATGTCTTATTATAAATTAAATAATTTCCATTG
GCATTTAACCGATGATCAGGGCTGGAGAATTGAAATAAAAAAATACCCAAAACTTACCGAAGTCGGATCTAAAAGAGCAC
AGACTTTAGTAGGCAATAAATTTGAACGATTCCCGTATTTTTTTGACGGAAATCCATATGGCGGATTTTATACTCAGGAA
GAAATTAAAGACGTTGTAAAATTTGCCGAAGACCATTATGTAAATATTATTCCCGAAATCGAAATGCCGGGTCATGCCAC
TGCAGCGGTAACGGCTTATCCAAATCTATCTTGTTTTCCGGATCGAAATTATAAAGTTGTAGAATCATGGGGCGTTTTTG
AAGATATTTTTTGTGCCGGAAAAGAAGAAACTTTTACTTTTTTAGAAGATGTTTTAACAGAAGTTATGGCTTTATTTCCG
AGTAAATACATTCATATTGGCGGAGATGAATGCCCAAAAGCAAGATGGAAAGAATGTCCGAACTGTCAAAAGAGAATTGC
AGCTTTAGGTTTAAAAGACGAACATGAACTGCAAAGCTATTTAACAACACGAATTGAAAAATTCCTAAACGCAAATGGAA
GGCAAATCCTGGGCTGGGACGAAATGCTGGAAGGCGGACTTGCGCCAAATGCAGCTGTAATGTCATGGCGAGGCGAATCT
GGCGGCATCAGCGCTGCAAAACAAAAGCATTTTGTGATTATGAATCCTGAGCAAGTGCTGTATCTGGATTACAACCAAGG
TTATTCTCCTCAGGAACCTTTAACAATTGGAAGATTAACAACGGTTGAAAAAATATACAATTACAATCCAACTCCTGTAG
ACAGCTTAACGGTTGAGGAGCAAAAATACATTATGGGCGTACAGTCTAATCTTTGGTCTGAATATTTGACAACTCCTGCG
AAATTAAATTATATGATTTATCCAAGAGTTTTTGCTTTAGCAGAAATTGCGTGGACTGAACCCAAAAACAAGAATTACAA
CCGTTTTATTCTAAATCAAATTCCGCATCATTTAGAGAAACTCGAAGCACAAAAAAGAATGTATAAAGTTCCAATTCCTT
TTGGATCTGAAGAAACCGCTTTAATTGCATCAAGTTATATTTTAGACTTAAAACCCACAATTAAAAACGGGCAGATATTC
TACACAATTGACGGTTACAATCCAGATGAAACGGCAGAACTTTATACAAAACCTGTAACGATACATATTCCAAAAGGAGA
ATTCCGAATTATAAAAACAGTCCAAATCAGTCCGGGCGGCAGAAAAAGTTCGATCAGTAAAATACTAGTTCGAAATCCAG
ATTTGAAACCGACCTTAGCACTAAAACCAACAAAAAAGGGTTTAAAATTCGATTATTATACCGGAACTTTTCAGCAGGTT
CAGGATTTAGAATTGACAAAACCTGTTAATTCGGGCATTTTTGAAGGCAAAATAAGTGCTGAAAAATGGAAAACGAAATT
AGAACGTTATATCGGCTTAAAATTTGACGGCTATATCTTTATTCCAGAAACAGCAAATTATACAATTTCAACGCTTTCAG
ATGACGGATCGAAGCTTTTTATAGACAATGAACTAGTTGTAAACAACGACGGCATACATTGGCTTAATGAAGCTTACGGA
GTTATTAAACTCGAAAAAGGATTTCATAAAATCAACATCAGCTATTTTGATCAGGTTGGAGGTACTACTTTAACTTGTTT
TATACAACAGGAAGGAAAAGAAAAACAGGAAATCAGTGAATCGCAGTTGTATTATGAATAA

Upstream 100 bases:

>100_bases
TACACTATTTTAAAGACATTTACACACAAATACCTTTTGCAAAAAAAATGCAAACTAACTAACAAACCTTAAATTTGTTT
AACAAAACAAAAAAGTAACC

Downstream 100 bases:

>100_bases
GAAAAAAGATTGCATGAGAAGAACAACTCTTTCCATTCGACGTAATAACCTATAGATATTGTATCCCCAAAACCCCAGCG
GGGTAAAATATGTATAGATT

Product: beta-N-acetylhexosaminidase

Products: NA

Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 766; Mature: 766

Protein sequence:

>766_residues
MQKSIFLLLIFCFSFGNAQSTCDNTLIIPAPNFYKTNGDSIRINGKIKIAFDKNTYSAKELKTAQIFESAVNANTPNKKS
NIEVLFIAEKPSPASKKEGYKINISSKKITVTGSEEGLFYAVQSLLQLLPNQPKNQEIKLPFATIEDEPRYDYRGLHLDV
CRHFFSVNVIKDFIAQMSYYKLNNFHWHLTDDQGWRIEIKKYPKLTEVGSKRAQTLVGNKFERFPYFFDGNPYGGFYTQE
EIKDVVKFAEDHYVNIIPEIEMPGHATAAVTAYPNLSCFPDRNYKVVESWGVFEDIFCAGKEETFTFLEDVLTEVMALFP
SKYIHIGGDECPKARWKECPNCQKRIAALGLKDEHELQSYLTTRIEKFLNANGRQILGWDEMLEGGLAPNAAVMSWRGES
GGISAAKQKHFVIMNPEQVLYLDYNQGYSPQEPLTIGRLTTVEKIYNYNPTPVDSLTVEEQKYIMGVQSNLWSEYLTTPA
KLNYMIYPRVFALAEIAWTEPKNKNYNRFILNQIPHHLEKLEAQKRMYKVPIPFGSEETALIASSYILDLKPTIKNGQIF
YTIDGYNPDETAELYTKPVTIHIPKGEFRIIKTVQISPGGRKSSISKILVRNPDLKPTLALKPTKKGLKFDYYTGTFQQV
QDLELTKPVNSGIFEGKISAEKWKTKLERYIGLKFDGYIFIPETANYTISTLSDDGSKLFIDNELVVNNDGIHWLNEAYG
VIKLEKGFHKINISYFDQVGGTTLTCFIQQEGKEKQEISESQLYYE

Sequences:

>Translated_766_residues
MQKSIFLLLIFCFSFGNAQSTCDNTLIIPAPNFYKTNGDSIRINGKIKIAFDKNTYSAKELKTAQIFESAVNANTPNKKS
NIEVLFIAEKPSPASKKEGYKINISSKKITVTGSEEGLFYAVQSLLQLLPNQPKNQEIKLPFATIEDEPRYDYRGLHLDV
CRHFFSVNVIKDFIAQMSYYKLNNFHWHLTDDQGWRIEIKKYPKLTEVGSKRAQTLVGNKFERFPYFFDGNPYGGFYTQE
EIKDVVKFAEDHYVNIIPEIEMPGHATAAVTAYPNLSCFPDRNYKVVESWGVFEDIFCAGKEETFTFLEDVLTEVMALFP
SKYIHIGGDECPKARWKECPNCQKRIAALGLKDEHELQSYLTTRIEKFLNANGRQILGWDEMLEGGLAPNAAVMSWRGES
GGISAAKQKHFVIMNPEQVLYLDYNQGYSPQEPLTIGRLTTVEKIYNYNPTPVDSLTVEEQKYIMGVQSNLWSEYLTTPA
KLNYMIYPRVFALAEIAWTEPKNKNYNRFILNQIPHHLEKLEAQKRMYKVPIPFGSEETALIASSYILDLKPTIKNGQIF
YTIDGYNPDETAELYTKPVTIHIPKGEFRIIKTVQISPGGRKSSISKILVRNPDLKPTLALKPTKKGLKFDYYTGTFQQV
QDLELTKPVNSGIFEGKISAEKWKTKLERYIGLKFDGYIFIPETANYTISTLSDDGSKLFIDNELVVNNDGIHWLNEAYG
VIKLEKGFHKINISYFDQVGGTTLTCFIQQEGKEKQEISESQLYYE
>Mature_766_residues
MQKSIFLLLIFCFSFGNAQSTCDNTLIIPAPNFYKTNGDSIRINGKIKIAFDKNTYSAKELKTAQIFESAVNANTPNKKS
NIEVLFIAEKPSPASKKEGYKINISSKKITVTGSEEGLFYAVQSLLQLLPNQPKNQEIKLPFATIEDEPRYDYRGLHLDV
CRHFFSVNVIKDFIAQMSYYKLNNFHWHLTDDQGWRIEIKKYPKLTEVGSKRAQTLVGNKFERFPYFFDGNPYGGFYTQE
EIKDVVKFAEDHYVNIIPEIEMPGHATAAVTAYPNLSCFPDRNYKVVESWGVFEDIFCAGKEETFTFLEDVLTEVMALFP
SKYIHIGGDECPKARWKECPNCQKRIAALGLKDEHELQSYLTTRIEKFLNANGRQILGWDEMLEGGLAPNAAVMSWRGES
GGISAAKQKHFVIMNPEQVLYLDYNQGYSPQEPLTIGRLTTVEKIYNYNPTPVDSLTVEEQKYIMGVQSNLWSEYLTTPA
KLNYMIYPRVFALAEIAWTEPKNKNYNRFILNQIPHHLEKLEAQKRMYKVPIPFGSEETALIASSYILDLKPTIKNGQIF
YTIDGYNPDETAELYTKPVTIHIPKGEFRIIKTVQISPGGRKSSISKILVRNPDLKPTLALKPTKKGLKFDYYTGTFQQV
QDLELTKPVNSGIFEGKISAEKWKTKLERYIGLKFDGYIFIPETANYTISTLSDDGSKLFIDNELVVNNDGIHWLNEAYG
VIKLEKGFHKINISYFDQVGGTTLTCFIQQEGKEKQEISESQLYYE

Specific function: Unknown

COG id: COG3525

COG function: function code G; N-acetyl-beta-hexosaminidase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 20 family [H]

Homologues:

Organism=Homo sapiens, GI189181666, Length=363, Percent_Identity=26.4462809917355, Blast_Score=129, Evalue=1e-29,
Organism=Homo sapiens, GI4504373, Length=366, Percent_Identity=23.4972677595628, Blast_Score=115, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17569815, Length=422, Percent_Identity=26.0663507109005, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281365639, Length=470, Percent_Identity=23.4042553191489, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24657474, Length=470, Percent_Identity=23.4042553191489, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24657468, Length=470, Percent_Identity=23.4042553191489, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI17647501, Length=470, Percent_Identity=23.4042553191489, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24653074, Length=430, Percent_Identity=24.6511627906977, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI45551090, Length=430, Percent_Identity=24.6511627906977, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17933586, Length=460, Percent_Identity=23.0434782608696, Blast_Score=86, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015882
- InterPro:   IPR001540
- InterPro:   IPR015883
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR011658 [H]

Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 87557; Mature: 87557

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSIFLLLIFCFSFGNAQSTCDNTLIIPAPNFYKTNGDSIRINGKIKIAFDKNTYSAKE
CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCCEEEEEEEEEEEECCCCCCHHH
LKTAQIFESAVNANTPNKKSNIEVLFIAEKPSPASKKEGYKINISSKKITVTGSEEGLFY
HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHH
AVQSLLQLLPNQPKNQEIKLPFATIEDEPRYDYRGLHLDVCRHFFSVNVIKDFIAQMSYY
HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHE
KLNNFHWHLTDDQGWRIEIKKYPKLTEVGSKRAQTLVGNKFERFPYFFDGNPYGGFYTQE
EECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCHH
EIKDVVKFAEDHYVNIIPEIEMPGHATAAVTAYPNLSCFPDRNYKVVESWGVFEDIFCAG
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCEECCCCCEEEEECCCCHHHHHHCC
KEETFTFLEDVLTEVMALFPSKYIHIGGDECPKARWKECPNCQKRIAALGLKDEHELQSY
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHH
LTTRIEKFLNANGRQILGWDEMLEGGLAPNAAVMSWRGESGGISAAKQKHFVIMNPEQVL
HHHHHHHHHCCCCCEEECHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEE
YLDYNQGYSPQEPLTIGRLTTVEKIYNYNPTPVDSLTVEEQKYIMGVQSNLWSEYLTTPA
EEECCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCEEECCHHHEEEHHHHHHHHHCCCCH
KLNYMIYPRVFALAEIAWTEPKNKNYNRFILNQIPHHLEKLEAQKRMYKVPIPFGSEETA
HEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCE
LIASSYILDLKPTIKNGQIFYTIDGYNPDETAELYTKPVTIHIPKGEFRIIKTVQISPGG
EEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHEECCEEEEECCCCEEEEEEEEECCCC
RKSSISKILVRNPDLKPTLALKPTKKGLKFDYYTGTFQQVQDLELTKPVNSGIFEGKISA
CHHHHHHHEEECCCCCCEEEECCCCCCCEEEEECCCHHHHHCCEECCCCCCCCCCCCCCH
EKWKTKLERYIGLKFDGYIFIPETANYTISTLSDDGSKLFIDNELVVNNDGIHWLNEAYG
HHHHHHHHHHHCCEECCEEEEECCCCEEEEEECCCCCEEEEECEEEEECCCCEECCCCCC
VIKLEKGFHKINISYFDQVGGTTLTCFIQQEGKEKQEISESQLYYE
EEEEECCCEEEEEEEHHCCCCCEEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MQKSIFLLLIFCFSFGNAQSTCDNTLIIPAPNFYKTNGDSIRINGKIKIAFDKNTYSAKE
CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCCEEEEEEEEEEEECCCCCCHHH
LKTAQIFESAVNANTPNKKSNIEVLFIAEKPSPASKKEGYKINISSKKITVTGSEEGLFY
HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHH
AVQSLLQLLPNQPKNQEIKLPFATIEDEPRYDYRGLHLDVCRHFFSVNVIKDFIAQMSYY
HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHE
KLNNFHWHLTDDQGWRIEIKKYPKLTEVGSKRAQTLVGNKFERFPYFFDGNPYGGFYTQE
EECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCHH
EIKDVVKFAEDHYVNIIPEIEMPGHATAAVTAYPNLSCFPDRNYKVVESWGVFEDIFCAG
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCEECCCCCEEEEECCCCHHHHHHCC
KEETFTFLEDVLTEVMALFPSKYIHIGGDECPKARWKECPNCQKRIAALGLKDEHELQSY
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHH
LTTRIEKFLNANGRQILGWDEMLEGGLAPNAAVMSWRGESGGISAAKQKHFVIMNPEQVL
HHHHHHHHHCCCCCEEECHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEE
YLDYNQGYSPQEPLTIGRLTTVEKIYNYNPTPVDSLTVEEQKYIMGVQSNLWSEYLTTPA
EEECCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCEEECCHHHEEEHHHHHHHHHCCCCH
KLNYMIYPRVFALAEIAWTEPKNKNYNRFILNQIPHHLEKLEAQKRMYKVPIPFGSEETA
HEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCE
LIASSYILDLKPTIKNGQIFYTIDGYNPDETAELYTKPVTIHIPKGEFRIIKTVQISPGG
EEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHEECCEEEEECCCCEEEEEEEEECCCC
RKSSISKILVRNPDLKPTLALKPTKKGLKFDYYTGTFQQVQDLELTKPVNSGIFEGKISA
CHHHHHHHEEECCCCCCEEEECCCCCCCEEEEECCCHHHHHCCEECCCCCCCCCCCCCCH
EKWKTKLERYIGLKFDGYIFIPETANYTISTLSDDGSKLFIDNELVVNNDGIHWLNEAYG
HHHHHHHHHHHCCEECCEEEEECCCCEEEEEECCCCCEEEEECEEEEECCCCEECCCCCC
VIKLEKGFHKINISYFDQVGGTTLTCFIQQEGKEKQEISESQLYYE
EEEEECCCEEEEEEEHHCCCCCEEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7881557; 12949112 [H]