Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298431

Identifier: 146298431

GI number: 146298431

Start: 731596

End: 732063

Strand: Direct

Name: 146298431

Synonym: Fjoh_0668

Alternate gene names: NA

Gene position: 731596-732063 (Clockwise)

Preceding gene: 146298430

Following gene: 146298432

Centisome position: 12.0

GC content: 39.53

Gene sequence:

>468_bases
ATGAATTTATTACCTCAAGAAAAATTTGAAACTCTTGGTTTGTCTTTACCGCCGGCGCCTCAGCCTCTGGGCATATACAA
ACCCTATTTAGTTGATGGTAAATATTTATACCTTTCTGGTCACGGGCCGGTTAGAGACGACAAATCCTTAATCATTGGCC
GAATTGGCGATGATATGGATATCGAAGAAGGAAAATTAGCCGCAAGACAAGTGGGTTTAACTATGCTTTCTACAATTGTA
ACCAATTTTGGAAGCCTGAATAAAGTAAAAAGAGTCATAAAAGTTTTAGGAATGGTCAATTGCAGCGGCGATTTTTTAAG
ACATCCCTATGTAATAAACGGCTGCAGTGAATTATTTGCCGAAGTCTGGGGACAAGAAAACGGAATTGGAGTAAGAAGCG
CCGTAGGAATGGGTTCTCTCCCAGACAATATTCCTGTTGAAGTTGAAGCTGTTTTCGAATTATTCTAA

Upstream 100 bases:

>100_bases
CTAAAAGACACTTTTAAATCCTGGACCGTCATGGAATCTTTAGTATCTGTTTTAGGCATCATTTTCGTTTTTATTTTAAA
CTCTATAATACATTAATATC

Downstream 100 bases:

>100_bases
AAAATTAGACCACAGACGATAACGATTAAAGAGTAATCTGTATTGGTTAAGGAAATACTTTGATTCTAAGTCTGTGGTTA
CGTTAAAAATATAGACCGCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor Protein; Endoribonuclease; Transcription Regulator; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-PSP Superfamily; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; Endoribonuclease-L-PSP Family Protein; Creatininase; Translation Initiation Inhibitor YjgF

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV
TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF

Sequences:

>Translated_155_residues
MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV
TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF
>Mature_155_residues
MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV
TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16907; Mature: 16907

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMD
CCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCC
IEEGKLAARQVGLTMLSTIVTNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEECCHHHHHH
EVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF
HHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMD
CCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCC
IEEGKLAARQVGLTMLSTIVTNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEECCHHHHHH
EVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF
HHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA