| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298429
Identifier: 146298429
GI number: 146298429
Start: 728488
End: 730065
Strand: Direct
Name: 146298429
Synonym: Fjoh_0666
Alternate gene names: NA
Gene position: 728488-730065 (Clockwise)
Preceding gene: 146298428
Following gene: 146298430
Centisome position: 11.95
GC content: 36.95
Gene sequence:
>1578_bases ATGTCAAATTTTAAACTCGTTTTATCTCTAATTTTTAAATTAAAAGACATGAAAAAGTTAACCATATTATATATCACAGG AATACTTTTAGGAAGTATGACATCCTGTACCAAGGATTTTGAGGAAATTAATAAGAACCCAAATTCAGTAGATAAACCAA ATCCGAATTTTGTTTTCAGTAAAGCACAACTTGACGGATTAAACAATAATTATTTCTTTACCAATATTCTGGAATGCGGC GGCTTATTGCAGCATTATGCTACTTATAAAGAAGCTTCTGGGGTTGGAGATAAATATTTAAGCAACGAAGTATATTTCTC GGCTTATTTCAATCAGGCGTACCCAACTGGTATAAATGAAACACAAATTGTAATCGATGCTTTAAAAAACAGTCCAAACG ACAGTAACCGACTTAATATTGCCAGAATCTGGAAAGTATATTTGTATCATAAATTAACTGATTTATACGGAGACATCCCG TATTCTGAAGCAGCGAAAGCTAACAGCACACAAGTTTTTCTTCCAAAATATGATTCTCAGGAATTTATCTATAAAGACTT ATTAAAAGAATTAGATGAAGCTGCTGCAGGATTAGATCCGGCAAAACCAAGTTTCGGAAAATCTGATTTTATTTATGACG GAGATGTAACGAAGTGGAAAAAATTCTCGTACTCTTTAATGCTTCGTCTGGGTTTAAGATTATCTAAAGTAGATCCTGCC CTATCTCAATCATGGGTTACCAAAGCGATTGCCGGCGGCGTAATTTTAAACGGAACAGATAATGCAATCATGAAATATAC TGACGGGCCAAATGATTTTAATCGAAATCCGGTTGGTTTTGATGCCCGAAGACAAGATTTTACAGCGGGGTCTTTTGGAC AAAAAAATGTTGAAGGCGGTAAACTGGCTAAAACATTTATCGATTTGCTGCAATCAACTGCCGATCCTCGAATCAGCGTT TATGCAGGAGTTTGGCAGGGAGGCTCACAAAACACAAGTCTTGCCATTCAAAAAGGTTTTCCTAACGGAACTAAAACAGC TCCAAGTGCGGCAGAACAAGGAACGTATTCTGAACCCAACCAAAGTACCGTTTTTAAATATGATGCACCGCTTGTACTTA TCAGCAATGCCGAAACCAATTTATATTTAGCGGAAGCTGCAGCAAGAGGCTGGTACACCAATGAAACGGATAAAGATTTA TATGAAAAAGGTGTAAAAGCTTCTTTCTTAAACATGGGAATTTATGGTGCTGCTTATGCTATTCCGGACGCAGCAGTATA TTTAACCGCAAATCCGTATAATGCCGCAGGAAGTTTTGAAGCCAAAATGAACCAGATTCATACGCAGATTTACATCGCAT TATTTGTAGACGAACAAGAAATTTATGCCAATTGGAGAAGAACCGGATACCCAGTTTTAACTCCTGTAAATTTCCCTGGA AACGTTACAAATGGCACAATACCAAGACGTTTAAAATATCCAACCAGCGAATATTCAGTGAATTCAGCTAACTTAGCAGA AGCAGTTAAGCGTCAGGGCGAAGATGCTTTTACAACAAGAATCTGGTGGGATAAATAA
Upstream 100 bases:
>100_bases ACACCAAACGTAGATCCAGAATCTGTATTCAGCGCAGGAAATGCTCAGGGTGTAGAACAATTTGGAGTGCCAAAAACCAG AAGTTTCGGTTTAAGTTTAA
Downstream 100 bases:
>100_bases AAATAATAACCGTTGCCGTAATTAAACACATAGAGACATAGTTTTTGAAAGTGTTGAAAGGCGTTTCACTTGCATTAACA TACATAGCATCTATGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECG GLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIP YSEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISV YAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDL YEKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK
Sequences:
>Translated_525_residues MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECG GLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIP YSEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISV YAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDL YEKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK >Mature_524_residues SNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECGG LLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPY SEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPAL SQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISVY AGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLY EKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPGN VTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58444; Mature: 58313
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE KAQLDGLNNNYFFTNILECGGLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINE EHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCC TQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPYSEAAKANSTQVFLPKYDSQ HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCH EFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHCCHH LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGG HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KLAKTFIDLLQSTADPRISVYAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPN HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCC QSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLYEKGVKASFLNMGIYGAAYA CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHEE IPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG CCCEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCCC NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure SNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE KAQLDGLNNNYFFTNILECGGLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINE EHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCC TQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPYSEAAKANSTQVFLPKYDSQ HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCH EFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHCCHH LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGG HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KLAKTFIDLLQSTADPRISVYAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPN HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCC QSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLYEKGVKASFLNMGIYGAAYA CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHEE IPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG CCCEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCCC NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA