Definition Metallosphaera sedula DSM 5348 chromosome, complete genome.
Accession NC_009440
Length 2,191,517

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Identifier: 146302826

GI number:

Start: 38432

End: 39739

Strand: Direct

Name: Not Available

Synonym: Msed_0041

Alternate gene names: NA

Gene position: NA

Preceding gene: 146302825

Following gene: 146302827

Centisome position: NA

GC content: NA

Gene sequence:

>1308_bases
ATGTCTCAAAAGCCACACTTGAATTTGATTGTTATAGGACACGTAGACCACGGAAAGAGCACTCTAGTTGGAAGACTTTT
AATGGATAGGGGTTTCTTGGATGAAAAGACCATTAAAGAGGCAGAGGAAGCTGCAAAGAAGCTAGGAAAAGAGTCAGAGA
AATACGCTTTCCTTCTAGATAGGCTCAAGGAGGAGAGGGAAAGAGGTGTTACAATCAACCTAACATTCATGAGATTCGAG
ACAAAGAAGTACTTCTTTACTATAATTGATGCTCCTGGGCACAGGGACTTCGTCAAGAACATGATCACTGGAGCTAGTCA
GGCCGACGCAGCAATATTGGCAGTTTCGGCTAGAAAAGGTGAATTTGAGTCAGGAATGAGCCTAGAGGGTCAGACTAGAG
AGCACATAATACTTGCCAAGACCATGGGTCTTAACCAAGTTATCGTAGCTATCACAAAGATGGACGTAGCAGAACCGCCA
TACGATCAGAAGAGATATAATGAGATAAAGGAGACCATCGAGAAGTTCATGAAGTCCTTCGGATTTGACATGTCTAAGGT
TAAGTTCATCCCAATTGTCTCAATCACTGGTGAGAATGTAACCAAGAGATCAGAAAACATGAAGTGGTATAACGGACCCA
CGCTGGAGGAAGCCCTAGATATGTTGGAGATCCCACCGAAGCCAGTTGACAAGCCTCTAAGGCTACCCATACAGGAAGTC
TATTCAATATCAGGTGTTGGTACCGTACCAGTCGGCAGAGTTGAGAGCGGTGTCATGAAGGTGGGCGATAAGATAGTTTT
CATGCCTGCAGGGAAATCCGCAGAGGTCAGATCTATCGAGACTCACCACACTAAGTTGGAGAAAGCAGAACCAGGAGACA
ACATTGGTTTCAACGTGAGGGGTATAGACAAGAAAGATGTTAAGAGGGGAGATGTAGTAGGTCATACTACTAACCCACCC
ACAGTTGCTGAGGAATTCACGGCGAGGGTAATAGTTGTGTGGCATCCAACAGCTCTGGCAGTTGGTTATACCCCGGTCGT
TCACGTTCACACAGCGAGCATTGCTTGTAGGGTTTCGGAGATAGTAGCAAGATTGGATCCGAAGACCGGTAAGGAGGCTG
AAAAGAACCCACAATTCATTAAGCAAGGAGAGTCGGCTATAGTCAAGTTCAAGCCCATAAAGCCGTTATGTGTTGAGAAG
TTCAGCGACTTCCCGCCATTAGGAAGATTTGCTATGAGGGATATGGGCAAGACTGTAGGTGTGGGAGTAATAAACGACGT
TAAGCCCAGTAAGATAGAGATAAAGTGA

Upstream 100 bases:

>100_bases
TAAGGAAGAAAGAAGAGATGGAAAGGATAGCCCTGAGCTCCAGATAAATAGCTAAACTTTTATTAACTAAGACCTTTATC
TCGGGTAGGAGTTGAGCTAG

Downstream 100 bases:

>100_bases
CAGGATAACGGTGTACATTAATGCCAAATAAAGCTAGAATACGACTGTGGAGCACCAACGTTAACAACCTTAATTATGTT
GTAAATCAGATAAAGGGTAT

Product: elongation factor 1-alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>435_residues
MSQKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFE
TKKYFFTIIDAPGHRDFVKNMITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPP
YDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKRSENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEV
YSISGVGTVPVGRVESGVMKVGDKIVFMPAGKSAEVRSIETHHTKLEKAEPGDNIGFNVRGIDKKDVKRGDVVGHTTNPP
TVAEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEK
FSDFPPLGRFAMRDMGKTVGVGVINDVKPSKIEIK

Sequences:
NA

Specific function: NA

COG id: COG5256

COG function: function code J; Translation elongation factor EF-1alpha (GTPase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA