| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ctaA [H]
Identifier: 146284481
GI number: 146284481
Start: 4523603
End: 4524658
Strand: Direct
Name: ctaA [H]
Synonym: PST_4170
Alternate gene names: 146284481
Gene position: 4523603-4524658 (Clockwise)
Preceding gene: 146284480
Following gene: 146284482
Centisome position: 99.04
GC content: 68.28
Gene sequence:
>1056_bases ATGGCCAGACCCGGATACCGCCTCGCCCTGATCGCCACCGCGCTGGCCGTGGTGGTCGTGCTGCTCGGTGCCTACACGCG GCTGACCCACGCCGGCCTCGGCTGCCCGGACTGGCCCGGCTGCTACGGTTTCCTTGCCGTGCCCATGAGCGAACACAAGC AGAACCTTGCCGCGCTGCGCTTTCCCGATGCACCGCTGGAGGTGCGCAAGGGCTGGAACGAGATGGTTCATCGCTATTTC GCCGGCGCCCTCGGGCTGGTGATCCTCGCCCTTGCGGTACAGGCGATACGCCGTCGCGGCCAACCCGGGCAGCCGCTGAA GTTGCCGCTGCTGCTGCTCGCGGTGGTCATCGCCCAGGCAATCTTCGGCATGTGGACGGTGACCCTGCAGCTCTGGCCGC AGGTAGTCACCGCGCACCTGCTCGGGGGTTTCACTACGCTCAGCCTGCTGTTTCTGCTGTGCCTGCGACTGTCCGGCGCG CTTGCTCCCTTGCCGGCCGTGGACGGTCGTCTGCGCAGATTCGCCGGCATCGCCCTGCTCGCGGTGGTGGCGCAGATCAC CCTGGGCGGTTGGGTCAGCAGCAACTATGCGGCGGTGGCCTGCACCGATTTCCCCACCTGCCACGGCGAATGGTGGCCGC GGATGGACTTCGCCAACGCCTTCAACCTGACCCACCACGACATCGGCCCCAACTACCTCGGCGGCCTGCTCTACGGCGAG GCGCGCACGGCGATCCATGTCAGCCACCGCATCGGTGCGCTGCTGGTGACGCTGGTGTTGCTGCTGCTCGCCGCCATGCT CATGCGCCGCGGCCTCAGCCGGCTGGCCGGGCTGCTCATCGCCGCGCTGGCGCTGCAGGTCGGCCTGGGTATCAGCAACG TGGTGTTCAACCTGCCGCTGGCGGTGGCCGTCGCGCACAACGGCGGCGGTGCCGCGCTGCTGCTGGTGCTGGTACTGGTC AATTACCGGCTGCGCCAGCCTGCACATGCCACCCGGCAAACCGAGCCTGCATCGATTTCGAACACGACTGGGCAGCTCGA TCTGCCCCGCGCATGA
Upstream 100 bases:
>100_bases ATTCTCGACGACCTGAAATACCTGCTGAAGATCTCGCAGATCGGCTGAGGCACTGCGCCGCTGCGCTGCGGTCCCAAACA GGCCGCCCAAGGAGAACCCG
Downstream 100 bases:
>100_bases CCACAAGGAGAACCCCCATGGCGACTCTACTCAGCGAACGCGGCGCTCAGGCCAGCTGGCGCGACTACCTGGAGCTGACC AAGCCGAAGGTGGTGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MARPGYRLALIATALAVVVVLLGAYTRLTHAGLGCPDWPGCYGFLAVPMSEHKQNLAALRFPDAPLEVRKGWNEMVHRYF AGALGLVILALAVQAIRRRGQPGQPLKLPLLLLAVVIAQAIFGMWTVTLQLWPQVVTAHLLGGFTTLSLLFLLCLRLSGA LAPLPAVDGRLRRFAGIALLAVVAQITLGGWVSSNYAAVACTDFPTCHGEWWPRMDFANAFNLTHHDIGPNYLGGLLYGE ARTAIHVSHRIGALLVTLVLLLLAAMLMRRGLSRLAGLLIAALALQVGLGISNVVFNLPLAVAVAHNGGGAALLLVLVLV NYRLRQPAHATRQTEPASISNTTGQLDLPRA
Sequences:
>Translated_351_residues MARPGYRLALIATALAVVVVLLGAYTRLTHAGLGCPDWPGCYGFLAVPMSEHKQNLAALRFPDAPLEVRKGWNEMVHRYF AGALGLVILALAVQAIRRRGQPGQPLKLPLLLLAVVIAQAIFGMWTVTLQLWPQVVTAHLLGGFTTLSLLFLLCLRLSGA LAPLPAVDGRLRRFAGIALLAVVAQITLGGWVSSNYAAVACTDFPTCHGEWWPRMDFANAFNLTHHDIGPNYLGGLLYGE ARTAIHVSHRIGALLVTLVLLLLAAMLMRRGLSRLAGLLIAALALQVGLGISNVVFNLPLAVAVAHNGGGAALLLVLVLV NYRLRQPAHATRQTEPASISNTTGQLDLPRA >Mature_350_residues ARPGYRLALIATALAVVVVLLGAYTRLTHAGLGCPDWPGCYGFLAVPMSEHKQNLAALRFPDAPLEVRKGWNEMVHRYFA GALGLVILALAVQAIRRRGQPGQPLKLPLLLLAVVIAQAIFGMWTVTLQLWPQVVTAHLLGGFTTLSLLFLLCLRLSGAL APLPAVDGRLRRFAGIALLAVVAQITLGGWVSSNYAAVACTDFPTCHGEWWPRMDFANAFNLTHHDIGPNYLGGLLYGEA RTAIHVSHRIGALLVTLVLLLLAAMLMRRGLSRLAGLLIAALALQVGLGISNVVFNLPLAVAVAHNGGGAALLLVLVLVN YRLRQPAHATRQTEPASISNTTGQLDLPRA
Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]
COG id: COG1612
COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003780 [H]
Pfam domain/function: PF02628 COX15-CtaA [H]
EC number: NA
Molecular weight: Translated: 37538; Mature: 37407
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS00699 NITROGENASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPGYRLALIATALAVVVVLLGAYTRLTHAGLGCPDWPGCYGFLAVPMSEHKQNLAALR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHEEE FPDAPLEVRKGWNEMVHRYFAGALGLVILALAVQAIRRRGQPGQPLKLPLLLLAVVIAQA CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IFGMWTVTLQLWPQVVTAHLLGGFTTLSLLFLLCLRLSGALAPLPAVDGRLRRFAGIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AVVAQITLGGWVSSNYAAVACTDFPTCHGEWWPRMDFANAFNLTHHDIGPNYLGGLLYGE HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC ARTAIHVSHRIGALLVTLVLLLLAAMLMRRGLSRLAGLLIAALALQVGLGISNVVFNLPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCE AVAVAHNGGGAALLLVLVLVNYRLRQPAHATRQTEPASISNTTGQLDLPRA EEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARPGYRLALIATALAVVVVLLGAYTRLTHAGLGCPDWPGCYGFLAVPMSEHKQNLAALR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHEEE FPDAPLEVRKGWNEMVHRYFAGALGLVILALAVQAIRRRGQPGQPLKLPLLLLAVVIAQA CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IFGMWTVTLQLWPQVVTAHLLGGFTTLSLLFLLCLRLSGALAPLPAVDGRLRRFAGIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AVVAQITLGGWVSSNYAAVACTDFPTCHGEWWPRMDFANAFNLTHHDIGPNYLGGLLYGE HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC ARTAIHVSHRIGALLVTLVLLLLAAMLMRRGLSRLAGLLIAALALQVGLGISNVVFNLPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCE AVAVAHNGGGAALLLVLVLVNYRLRQPAHATRQTEPASISNTTGQLDLPRA EEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA