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The map label for this gene is yvdB [H]

Identifier: 146284472

GI number: 146284472

Start: 4515524

End: 4517062

Strand: Direct

Name: yvdB [H]

Synonym: PST_4161

Alternate gene names: 146284472

Gene position: 4515524-4517062 (Clockwise)

Preceding gene: 146284471

Following gene: 146284473

Centisome position: 98.86

GC content: 70.18

Gene sequence:

>1539_bases
ATGAATGCAGAAACGATCAAAGCAACATTGCCACGCGACCTGATGGCGTCCGTGGTGGTCTTCCTGGTGGCACTGCCGCT
GTGCATGGGCATTGCCATCGCTTCGGGCCTGCCGCCCGCCAAGGGCGTCATCACCGGTATCGTCGGCGGGCTGGTGGTGG
GCTGGCTGGCCGGCGCGCCGCTGCAGGTCAGTGGCCCGGCCGCGGGCCTCACGGTGCTGGTCTTCGAATTGGTGCAGCAA
TATGGCGCCGCGATGCTCGGCCCGATCCTGCTGCTGGCCGGCGCTCTGCAGCTGCTGGCCGGGCGGCTGAAGCTGGGTTG
CTGGTTCCGCGTTACCGCGCCGGCCGTGGTCTACGGCATGTTGGCAGGCATCGGCATTCTCATCGTGCTGTCGCAGTTGC
ACGTGATGATGGATGCGCAGCCGGAAGCCTCCGGACTGGACAATCTCGGCGCCTTTCCCGCCGCGCTGTGGGCGGCCCTG
CCGTTCTCCGGCGGCAACGGCATGGCCGCCGCCTCCCTCGGCCTGCTGACCATCGCCTGCATGTGGACATGGGATCGGCT
CAGGCCGCAGAGTCTGCGTCTGCTGCCCGGCGCGCTGCTCGGTGTCGCGGCGGCGACGCTGGTGGGGCTGTGGCTGGGGC
TCGACGTGCGCCGTGTCGAGGTGCCCGACAACCTTGCCGACGCCGTCAGCTGGCTGCAGCCGGCCGATCTGCTGGCGTTC
GCCGATCCCGGCCTGCTGGTCGCGGCGCTGGCCGTGGCCTTTATCGCCAGCGCCGAAACCCTGCTGTCCGCCGCCGCGGT
CGATCGCATGCACCAGGGCCCGCGTGCCGATTTCGACCGCGAGCTCACCGCGCAGGGCGTCGGCAACATGCTCTGCGGCG
TGCTCGGCGCGCTGCCGATGACCGGCGTGATCGTGCGCAGCTCGGCCAATGTGCAGGCCGGCGCGCGTACACGGCTGTCG
GCCATGCTGCATGCGCTCTGGCTGCTGGCCGCGGTGGTGCTGCTGGCCGCGCTGCTGGAGCAGGTTCCGGTGGCGAGCCT
GGCCGGTGTGCTGGTCTACACCGGGCTCAAGCTGATCGACCTGGACGCGCTGCGCCAGCTCGGCCGTTACGGCCGCATGG
CCATGCTGATTCATGTCGCCACCGCGCTGACCATCGTCGCCACCGACCTGCTGACCGGCGTGCTGCTGGGCTTTGCGCTG
ACACTGGCGCAGCTGGCCTGGCAGGCGTCGCGACTGAAGATCGGCGTGGTGCGCGACGGCCGCCGGGTCGAGCTGCGCAT
GCAGGGTGCGGCGACCTTTCTTCGCGTGCCGCAGCTCGCCCGCGCACTGCAGGGCGTGCCGCAGGATGCCTGGCTGCATG
TACCGATGGCGCACCTGCGCTACATCGATCACGCCTGCATGGAGCTGCTGGAGGAATGGCAGCGCGCCAACCAGGCCAGC
GGCGCGCGGCTGATCATCGAAGCGCGAGCGCTGACCCGGCGGGTCGAAGGCCGGCGTCGACAGGCCGCACATCTCGCCGC
AGCCGCCGCCGGGAACTAA

Upstream 100 bases:

>100_bases
CGCACCGCGCTACCTGCAAGCCTGAACCAGCGGCCGCAAAGGCATTGGCTGTCACTCCCGGCGGCGCCGCTGGGCGTCGC
CGCGTTGTCGAGGATTTCGG

Downstream 100 bases:

>100_bases
TCGGGGCGGCCAAGCCCTCATCTTTCAGGCATCAACATGTGCACCTTGCAGGCAGCGCATCGGGCGAACCGGTGCGCTGC
CTGCGCTTGCGGAGGATGAA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MNAETIKATLPRDLMASVVVFLVALPLCMGIAIASGLPPAKGVITGIVGGLVVGWLAGAPLQVSGPAAGLTVLVFELVQQ
YGAAMLGPILLLAGALQLLAGRLKLGCWFRVTAPAVVYGMLAGIGILIVLSQLHVMMDAQPEASGLDNLGAFPAALWAAL
PFSGGNGMAAASLGLLTIACMWTWDRLRPQSLRLLPGALLGVAAATLVGLWLGLDVRRVEVPDNLADAVSWLQPADLLAF
ADPGLLVAALAVAFIASAETLLSAAAVDRMHQGPRADFDRELTAQGVGNMLCGVLGALPMTGVIVRSSANVQAGARTRLS
AMLHALWLLAAVVLLAALLEQVPVASLAGVLVYTGLKLIDLDALRQLGRYGRMAMLIHVATALTIVATDLLTGVLLGFAL
TLAQLAWQASRLKIGVVRDGRRVELRMQGAATFLRVPQLARALQGVPQDAWLHVPMAHLRYIDHACMELLEEWQRANQAS
GARLIIEARALTRRVEGRRRQAAHLAAAAAGN

Sequences:

>Translated_512_residues
MNAETIKATLPRDLMASVVVFLVALPLCMGIAIASGLPPAKGVITGIVGGLVVGWLAGAPLQVSGPAAGLTVLVFELVQQ
YGAAMLGPILLLAGALQLLAGRLKLGCWFRVTAPAVVYGMLAGIGILIVLSQLHVMMDAQPEASGLDNLGAFPAALWAAL
PFSGGNGMAAASLGLLTIACMWTWDRLRPQSLRLLPGALLGVAAATLVGLWLGLDVRRVEVPDNLADAVSWLQPADLLAF
ADPGLLVAALAVAFIASAETLLSAAAVDRMHQGPRADFDRELTAQGVGNMLCGVLGALPMTGVIVRSSANVQAGARTRLS
AMLHALWLLAAVVLLAALLEQVPVASLAGVLVYTGLKLIDLDALRQLGRYGRMAMLIHVATALTIVATDLLTGVLLGFAL
TLAQLAWQASRLKIGVVRDGRRVELRMQGAATFLRVPQLARALQGVPQDAWLHVPMAHLRYIDHACMELLEEWQRANQAS
GARLIIEARALTRRVEGRRRQAAHLAAAAAGN
>Mature_512_residues
MNAETIKATLPRDLMASVVVFLVALPLCMGIAIASGLPPAKGVITGIVGGLVVGWLAGAPLQVSGPAAGLTVLVFELVQQ
YGAAMLGPILLLAGALQLLAGRLKLGCWFRVTAPAVVYGMLAGIGILIVLSQLHVMMDAQPEASGLDNLGAFPAALWAAL
PFSGGNGMAAASLGLLTIACMWTWDRLRPQSLRLLPGALLGVAAATLVGLWLGLDVRRVEVPDNLADAVSWLQPADLLAF
ADPGLLVAALAVAFIASAETLLSAAAVDRMHQGPRADFDRELTAQGVGNMLCGVLGALPMTGVIVRSSANVQAGARTRLS
AMLHALWLLAAVVLLAALLEQVPVASLAGVLVYTGLKLIDLDALRQLGRYGRMAMLIHVATALTIVATDLLTGVLLGFAL
TLAQLAWQASRLKIGVVRDGRRVELRMQGAATFLRVPQLARALQGVPQDAWLHVPMAHLRYIDHACMELLEEWQRANQAS
GARLIIEARALTRRVEGRRRQAAHLAAAAAGN

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=419, Percent_Identity=29.8329355608592, Blast_Score=115, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 53658; Mature: 53658

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAETIKATLPRDLMASVVVFLVALPLCMGIAIASGLPPAKGVITGIVGGLVVGWLAGAP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
LQVSGPAAGLTVLVFELVQQYGAAMLGPILLLAGALQLLAGRLKLGCWFRVTAPAVVYGM
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHH
LAGIGILIVLSQLHVMMDAQPEASGLDNLGAFPAALWAALPFSGGNGMAAASLGLLTIAC
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
MWTWDRLRPQSLRLLPGALLGVAAATLVGLWLGLDVRRVEVPDNLADAVSWLQPADLLAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCHHHHHHC
ADPGLLVAALAVAFIASAETLLSAAAVDRMHQGPRADFDRELTAQGVGNMLCGVLGALPM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGVIVRSSANVQAGARTRLSAMLHALWLLAAVVLLAALLEQVPVASLAGVLVYTGLKLID
HCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCC
LDALRQLGRYGRMAMLIHVATALTIVATDLLTGVLLGFALTLAQLAWQASRLKIGVVRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
RRVELRMQGAATFLRVPQLARALQGVPQDAWLHVPMAHLRYIDHACMELLEEWQRANQAS
CEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
GARLIIEARALTRRVEGRRRQAAHLAAAAAGN
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAETIKATLPRDLMASVVVFLVALPLCMGIAIASGLPPAKGVITGIVGGLVVGWLAGAP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
LQVSGPAAGLTVLVFELVQQYGAAMLGPILLLAGALQLLAGRLKLGCWFRVTAPAVVYGM
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHH
LAGIGILIVLSQLHVMMDAQPEASGLDNLGAFPAALWAALPFSGGNGMAAASLGLLTIAC
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
MWTWDRLRPQSLRLLPGALLGVAAATLVGLWLGLDVRRVEVPDNLADAVSWLQPADLLAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCHHHHHHC
ADPGLLVAALAVAFIASAETLLSAAAVDRMHQGPRADFDRELTAQGVGNMLCGVLGALPM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGVIVRSSANVQAGARTRLSAMLHALWLLAAVVLLAALLEQVPVASLAGVLVYTGLKLID
HCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCC
LDALRQLGRYGRMAMLIHVATALTIVATDLLTGVLLGFALTLAQLAWQASRLKIGVVRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
RRVELRMQGAATFLRVPQLARALQGVPQDAWLHVPMAHLRYIDHACMELLEEWQRANQAS
CEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
GARLIIEARALTRRVEGRRRQAAHLAAAAAGN
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]