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The map label for this gene is algH [C]

Identifier: 146284268

GI number: 146284268

Start: 4294151

End: 4294720

Strand: Direct

Name: algH [C]

Synonym: PST_3956

Alternate gene names: 146284268

Gene position: 4294151-4294720 (Clockwise)

Preceding gene: 146284267

Following gene: 146284269

Centisome position: 94.02

GC content: 65.61

Gene sequence:

>570_bases
ATGAAAAGCACCGCGCCCAGCTACCTCAAGCATCACTTTCTGATCGCCATGCCGCAGATGGCCGATCCGAACTTTGCCCA
GACGCTGATCTACCTGATCGAGCACGGCCCGGAAGGCGCCATGGGGCTTATCGTCAACCGTCCAAGTGGCCTGAGCCTGG
CCGATGTGCTCGAGCAGCTGCGCCCGGACGAACCGATTCCGGCACTTTGTCAGAGCCTGCCTATCTTCGCAGGCGGCCCG
GTGCAGACCGACCGCGGCTTCGTCCTGCATTCGGCCGAGCAGCAGTTTCAGGCGACCTTGATGCTCGGCCCGCTCGGCAT
GAGCACGTCCCAGGATGTGCTGTTCGCCATTGCCGACGGTCAAGGCCCGCAGCGGCATTTCGTGGCGCTGGGCTACGCCG
GCTGGGAAGCCGGCCAGCTGGAAGCGGAGCTGGCCGACAATACCTGGCTGAGCTGTCCGGCCGACCCACAGATCCTGTTT
GACCTCCCCCACGATCAGCGCCTGCAGGCAGCCGCCGCCTCGCTGGGCGTCGACCTGCGCCTGCTCAGCACCCAGGTCGG
CCACGCATGA

Upstream 100 bases:

>100_bases
GCTTCGAACGCGGCGACCGGCTGTCGAGCCGCTGAAACGCACGCGGGACCAACGGTCGCAGCTGTAGCCGGAATGCGGTG
CAACGCTTAAGCTAACGCGC

Downstream 100 bases:

>100_bases
GCACGCCGCGGCTGCTGCTCGGCTTCGACTATGGCACCAAGCAGATCGGCGTCGCCGTCGGCCAGGTCGTGACCGGCCAG
GCCCGCGAGCTGTGCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKSTAPSYLKHHFLIAMPQMADPNFAQTLIYLIEHGPEGAMGLIVNRPSGLSLADVLEQLRPDEPIPALCQSLPIFAGGP
VQTDRGFVLHSAEQQFQATLMLGPLGMSTSQDVLFAIADGQGPQRHFVALGYAGWEAGQLEAELADNTWLSCPADPQILF
DLPHDQRLQAAAASLGVDLRLLSTQVGHA

Sequences:

>Translated_189_residues
MKSTAPSYLKHHFLIAMPQMADPNFAQTLIYLIEHGPEGAMGLIVNRPSGLSLADVLEQLRPDEPIPALCQSLPIFAGGP
VQTDRGFVLHSAEQQFQATLMLGPLGMSTSQDVLFAIADGQGPQRHFVALGYAGWEAGQLEAELADNTWLSCPADPQILF
DLPHDQRLQAAAASLGVDLRLLSTQVGHA
>Mature_189_residues
MKSTAPSYLKHHFLIAMPQMADPNFAQTLIYLIEHGPEGAMGLIVNRPSGLSLADVLEQLRPDEPIPALCQSLPIFAGGP
VQTDRGFVLHSAEQQFQATLMLGPLGMSTSQDVLFAIADGQGPQRHFVALGYAGWEAGQLEAELADNTWLSCPADPQILF
DLPHDQRLQAAAASLGVDLRLLSTQVGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=185, Percent_Identity=42.7027027027027, Blast_Score=154, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3956_PSEU5 (A4VRH8)

Other databases:

- EMBL:   CP000304
- RefSeq:   YP_001174421.1
- ProteinModelPortal:   A4VRH8
- SMR:   A4VRH8
- STRING:   A4VRH8
- GeneID:   5096917
- GenomeReviews:   CP000304_GR
- KEGG:   psa:PST_3956
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- PhylomeDB:   A4VRH8
- ProtClustDB:   PRK00228
- BioCyc:   PSTU379731:PST_3956-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20319; Mature: 20319

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTAPSYLKHHFLIAMPQMADPNFAQTLIYLIEHGPEGAMGLIVNRPSGLSLADVLEQL
CCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
RPDEPIPALCQSLPIFAGGPVQTDRGFVLHSAEQQFQATLMLGPLGMSTSQDVLFAIADG
CCCCCHHHHHHCCCCEECCCCCCCCCEEEECCHHHHEEEEEECCCCCCCCCCEEEEEECC
QGPQRHFVALGYAGWEAGQLEAELADNTWLSCPADPQILFDLPHDQRLQAAAASLGVDLR
CCCCEEEEEEEECCCCCCCEEEEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHCCEEE
LLSTQVGHA
EECHHCCCC
>Mature Secondary Structure
MKSTAPSYLKHHFLIAMPQMADPNFAQTLIYLIEHGPEGAMGLIVNRPSGLSLADVLEQL
CCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
RPDEPIPALCQSLPIFAGGPVQTDRGFVLHSAEQQFQATLMLGPLGMSTSQDVLFAIADG
CCCCCHHHHHHCCCCEECCCCCCCCCEEEECCHHHHEEEEEECCCCCCCCCCEEEEEECC
QGPQRHFVALGYAGWEAGQLEAELADNTWLSCPADPQILFDLPHDQRLQAAAASLGVDLR
CCCCEEEEEEEECCCCCCCEEEEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHCCEEE
LLSTQVGHA
EECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA