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The map label for this gene is 146284267

Identifier: 146284267

GI number: 146284267

Start: 4293132

End: 4294085

Strand: Direct

Name: 146284267

Synonym: PST_3955

Alternate gene names: NA

Gene position: 4293132-4294085 (Clockwise)

Preceding gene: 146284266

Following gene: 146284268

Centisome position: 93.99

GC content: 66.35

Gene sequence:

>954_bases
TTGCGACGGCGAGCTCAAAGCCGGCAGACTGCGCGGCACTTCGAGCCGACCCGACACGCGATGAACGCCGCTATCCGCCA
TCCTGCGCCTGAAACGACCCGAGTCCGCCCCGCGGACCGGCTCGGCTTCACGCTTTTCCTGGCTGCTGCACTGCACCTGG
CCCTGATCCTCGGCCTGGGCTTCACGCTGTCCGAACCGAAGCAGATCAGCAAGACGCTGGAAATCACCCTCTCGACGTTC
AAGAGCGAGGAAAAGCCCAAGGACGCGGATTTCCTCGCCCAGGACAACCAGCAGGGCAGCGGCACGCTGGAGCACAAGGC
GTCGCCGAAGACCACCGAGCAGGCGCCCTTTCAGGACACCGAAGTCCGCAAAGTCACTCCGCCCGCCGCACCGCCGCCCA
GCACCCGGCCTGAGCCGGCCAAGACGGTCGTCACCACGCGCAGCCCGCAGCAGCAGAAGGCAGAGGTCAAGCAGCAGACG
CAACCACAGCCCGAGCCGCAGTCCGCCCCGGCATTCGACAGTTCGCAGCTGAGCGCCGAGATCGCCAGCCTGGAGGCAGA
ACTGGCGAAGGACGTCGAGCGCTACGCCAAACGACCGCGGGTCAGCCGACAGAACAGCGCGGCCACGATGCGTGACATCA
GCGCCTGGTATCGCGACGAATGGCGCAAGAAAGTCGAGCGCATCGGCAACCTCAACTACCCCGACGAAGCCCGCCGCCAG
CAGATCTACGGCAGCCTGCGCATGCTCGTCACCATCAACCGCGACGGCACCGTACAGGAACTGCGTGTGATCGAGTCGTC
CGGCCAGCCGGTGCTCGATGATGCCGCACTGCGCATCGTTCGCCTGGCCGCGCCGTTCGCCCCCTTCACCGGCGAACTGG
CGCAGAAGTACGATCAGGTCGAAATCATCCGCACCTGGCGCTTCGAACGCGGCGACCGGCTGTCGAGCCGCTGA

Upstream 100 bases:

>100_bases
AATCGACAATGCCTTCGATACCCGTATCGGCGAACGCCTCATGGACGCGATCGCGGCCAAGCTACAAGCTTGAACCAGCT
AACAGCTTTGAGTTCGGAGC

Downstream 100 bases:

>100_bases
AACGCACGCGGGACCAACGGTCGCAGCTGTAGCCGGAATGCGGTGCAACGCTTAAGCTAACGCGCATGAAAAGCACCGCG
CCCAGCTACCTCAAGCATCA

Product: TonB domain-containing protein

Products: NA

Alternate protein names: NB Protein; NB-Like Protein; NB Family C-Terminal Domain Protein; NB-Like; NB C-Terminal; NB Domain-Containing Protein; NB Protein C-Terminal Domain; NB-Related Transmembrane Protein; GETHR Pentapeptide; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; Periplasmic Protein/ Biopolymer Transport; NB-Dependent Receptor; Periplasmic Protein nB Links Inner And Outer Membranes; NB Family C-Terminal Domain-Containing; Nb Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRRRAQSRQTARHFEPTRHAMNAAIRHPAPETTRVRPADRLGFTLFLAAALHLALILGLGFTLSEPKQISKTLEITLSTF
KSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQDTEVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQT
QPQPEPQSAPAFDSSQLSAEIASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARRQ
QIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKYDQVEIIRTWRFERGDRLSSR

Sequences:

>Translated_317_residues
MRRRAQSRQTARHFEPTRHAMNAAIRHPAPETTRVRPADRLGFTLFLAAALHLALILGLGFTLSEPKQISKTLEITLSTF
KSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQDTEVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQT
QPQPEPQSAPAFDSSQLSAEIASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARRQ
QIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKYDQVEIIRTWRFERGDRLSSR
>Mature_317_residues
MRRRAQSRQTARHFEPTRHAMNAAIRHPAPETTRVRPADRLGFTLFLAAALHLALILGLGFTLSEPKQISKTLEITLSTF
KSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQDTEVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQT
QPQPEPQSAPAFDSSQLSAEIASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARRQ
QIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKYDQVEIIRTWRFERGDRLSSR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35756; Mature: 35756

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRAQSRQTARHFEPTRHAMNAAIRHPAPETTRVRPADRLGFTLFLAAALHLALILGLG
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
FTLSEPKQISKTLEITLSTFKSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQDT
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQTQPQPEPQSAPAFDSSQLSAE
CCEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARRQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKYDQV
HHHHCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EIIRTWRFERGDRLSSR
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRRRAQSRQTARHFEPTRHAMNAAIRHPAPETTRVRPADRLGFTLFLAAALHLALILGLG
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
FTLSEPKQISKTLEITLSTFKSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQDT
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQTQPQPEPQSAPAFDSSQLSAE
CCEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARRQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKYDQV
HHHHCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EIIRTWRFERGDRLSSR
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA