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The map label for this gene is rdoA [H]

Identifier: 146284180

GI number: 146284180

Start: 4189176

End: 4190150

Strand: Direct

Name: rdoA [H]

Synonym: PST_3868

Alternate gene names: 146284180

Gene position: 4189176-4190150 (Clockwise)

Preceding gene: 146284179

Following gene: 146284182

Centisome position: 91.72

GC content: 66.46

Gene sequence:

>975_bases
ATGTCCCATCCCTTCGACACACTCACGCCGGACCTGGTCCTCGACGCCGTGGAAAGCATCGGCTACCTCAGCGATGCCCG
CGTGCTGGCGCTCAACAGCTACGAGAACCGCGTCTATCAGGTGGGCATCGAAGACGAAACGCCGCTGATCGCCAAGTTCT
ATCGTCCGGGTCGCTGGAGCGACGCGGCGATCCTCGAGGAGCACCAGTTCAGTCTGGAGCTGGCCGAGCACGAGGTGCCG
GTGGTGGCACCGCTCGAGCGCGACGGCAGCACGCTGTTCGAGCACGCCGGCTTTCGCTTCGCCCTCTTCCCGCGCCGCGG
CGGCCGCGCACCGGAGCCCGGCAATCTCGACCAGCTCTATCGCCTCGGCCAGCTGCTGGGCCGCATGCATGCGGTAGGCG
CCAACCGCCCGTTCGAGCATCGCGAAACGCTGGGCGTGCAGAACTTCGGCCATGATTCGCTGAGCACGTTGCTGGAAGGC
GACTTCGTGCCGCGGAGCCTGCTGCCGGCGTACGAGTCGGTGGCGCGGGACCTGCTCAAGCGGGTCGAGGATGTCTTCGC
CAGCACAGACTTCACCCCGATCCGCCTGCATGGCGATTGTCACCCGGGCAATATCCTCGCCCGCGACGACGCCTTCTATC
TGGTCGACCTGGATGACTGCCGCATGGGCCCAGCAGTACAGGATCTGTGGATGATGCTCGCCGGCGAGCGACACGAGCGG
CTCGGCCAGCTGGCCGAACTGGTGGACGGCTACAACGAATTCCACGATTTCGCCCCGCGCGAGCTGCCGCTGATCGAGGC
CCTGCGCGCGCTGCGGCTGATGCACTACAGCGCCTGGCTGGCACGACGCTGGGACGACCCGGCCTTCCCCATGAGCTTTC
CCTGGTTCGGCAGCGAACGCTACTGGGGCGACCAGGTGCTGATCCTGCGCGAGCAGATGTCGGCGCTGCAGGAAGAGCCA
CTCAGGCTGTTCTAG

Upstream 100 bases:

>100_bases
GGTCGATGTCTATTGCCTGGCGCGCACCCCGAAACCAGGCGAATGAAGCCGCCGACCGATGGAGGGCGTACACTGGACGA
CCTAGTCAGCGGAGCCGGTC

Downstream 100 bases:

>100_bases
TGGCGAGCCGGTTTTGGCCGGCTGAAGCCCACCGAGCCGGCCAATGCCTACACGGGCGAAGGCCCTCTTCAGGCCTCTTC
GATCAGCCAGTCCAGCCGCC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSHPFDTLTPDLVLDAVESIGYLSDARVLALNSYENRVYQVGIEDETPLIAKFYRPGRWSDAAILEEHQFSLELAEHEVP
VVAPLERDGSTLFEHAGFRFALFPRRGGRAPEPGNLDQLYRLGQLLGRMHAVGANRPFEHRETLGVQNFGHDSLSTLLEG
DFVPRSLLPAYESVARDLLKRVEDVFASTDFTPIRLHGDCHPGNILARDDAFYLVDLDDCRMGPAVQDLWMMLAGERHER
LGQLAELVDGYNEFHDFAPRELPLIEALRALRLMHYSAWLARRWDDPAFPMSFPWFGSERYWGDQVLILREQMSALQEEP
LRLF

Sequences:

>Translated_324_residues
MSHPFDTLTPDLVLDAVESIGYLSDARVLALNSYENRVYQVGIEDETPLIAKFYRPGRWSDAAILEEHQFSLELAEHEVP
VVAPLERDGSTLFEHAGFRFALFPRRGGRAPEPGNLDQLYRLGQLLGRMHAVGANRPFEHRETLGVQNFGHDSLSTLLEG
DFVPRSLLPAYESVARDLLKRVEDVFASTDFTPIRLHGDCHPGNILARDDAFYLVDLDDCRMGPAVQDLWMMLAGERHER
LGQLAELVDGYNEFHDFAPRELPLIEALRALRLMHYSAWLARRWDDPAFPMSFPWFGSERYWGDQVLILREQMSALQEEP
LRLF
>Mature_323_residues
SHPFDTLTPDLVLDAVESIGYLSDARVLALNSYENRVYQVGIEDETPLIAKFYRPGRWSDAAILEEHQFSLELAEHEVPV
VAPLERDGSTLFEHAGFRFALFPRRGGRAPEPGNLDQLYRLGQLLGRMHAVGANRPFEHRETLGVQNFGHDSLSTLLEGD
FVPRSLLPAYESVARDLLKRVEDVFASTDFTPIRLHGDCHPGNILARDDAFYLVDLDDCRMGPAVQDLWMMLAGERHERL
GQLAELVDGYNEFHDFAPRELPLIEALRALRLMHYSAWLARRWDDPAFPMSFPWFGSERYWGDQVLILREQMSALQEEPL
RLF

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=319, Percent_Identity=47.9623824451411, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 37076; Mature: 36945

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPFDTLTPDLVLDAVESIGYLSDARVLALNSYENRVYQVGIEDETPLIAKFYRPGRWS
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCC
DAAILEEHQFSLELAEHEVPVVAPLERDGSTLFEHAGFRFALFPRRGGRAPEPGNLDQLY
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCCHHHHH
RLGQLLGRMHAVGANRPFEHRETLGVQNFGHDSLSTLLEGDFVPRSLLPAYESVARDLLK
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RVEDVFASTDFTPIRLHGDCHPGNILARDDAFYLVDLDDCRMGPAVQDLWMMLAGERHER
HHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCHHHHH
LGQLAELVDGYNEFHDFAPRELPLIEALRALRLMHYSAWLARRWDDPAFPMSFPWFGSER
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YWGDQVLILREQMSALQEEPLRLF
CCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SHPFDTLTPDLVLDAVESIGYLSDARVLALNSYENRVYQVGIEDETPLIAKFYRPGRWS
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCC
DAAILEEHQFSLELAEHEVPVVAPLERDGSTLFEHAGFRFALFPRRGGRAPEPGNLDQLY
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCCHHHHH
RLGQLLGRMHAVGANRPFEHRETLGVQNFGHDSLSTLLEGDFVPRSLLPAYESVARDLLK
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RVEDVFASTDFTPIRLHGDCHPGNILARDDAFYLVDLDDCRMGPAVQDLWMMLAGERHER
HHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCHHHHH
LGQLAELVDGYNEFHDFAPRELPLIEALRALRLMHYSAWLARRWDDPAFPMSFPWFGSER
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YWGDQVLILREQMSALQEEPLRLF
CCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]