| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284135
Identifier: 146284135
GI number: 146284135
Start: 4135459
End: 4136829
Strand: Direct
Name: 146284135
Synonym: PST_3823
Alternate gene names: NA
Gene position: 4135459-4136829 (Clockwise)
Preceding gene: 146284134
Following gene: 146284136
Centisome position: 90.54
GC content: 60.03
Gene sequence:
>1371_bases ATGCCGGTAGCAGACATGTATCCGCTCACCCTACAGATTCATACAGACCACGTATGGCACGACGCCATGCAACTGACCTT CGAGCAATCCGCGTTGGGGCTGGAGGGCACCTGCTCGTATGGATACAAGCAGGCATATCTGGTTGATGCCTTGGACGTCA TGGGTAGCACATTGAGCAATGCGGTCAGCGCCACGCTACCCCTGGGCTGGGATCTCTGGCGCCTCCCCCATGCCCCCTCC TTTCTCTTCGACATCCTGCCCGCCGGAGCGGCTCGTCGTTCCCTGCTCAAGCGTCTGGGGGGCGAGCGACCCGGGGATCT GGATCTTGATCTTTTCCTACTGAGCCGCTGCACTCCCGCACCTGTCGGCAATCTGCGCATCAAGGAGGCGGCGGATGCCA TCGCCAATAGTCCGATGCTGGGCTTCTCGCGGGAGGAAGTCATCAGCCGCGACTCGCGTTTCCTGGAATACGCCTACGAA CAGGGAGCAGCCATCGGTGGCGCCACTGGCGCGGGCGGCGAAGCGCCCAAGCTGCTACTGACCGAAGACCGACAGGGAGC GCTGCACCCCGATGCGGCTCTTCCTGACGCGGAAGCCGCTCGGCATTGGGTCGTAAAATTCGCACGCAACCAAGCCAGCA AGACTGACCAGGAAATCCTGCGCAGCGAATTCTGCTTCTACCGAGGCCTTCAGAAACTGGGGCTGGATACCGTCGATGCT GATGGGCTGTCTCTGGAAGAGGGGCGCAAGCCCAGCCTGTGGATGAAGCGTTTCGATCGCGACGTCACCGTCGATGGGGT CGTCCGGACTGCTGTCGAGTCCATGTATTCACTGGCGGGCGTGACCGAGGCCGGTAGCTATATGTCGCACACCAATGTAC TGCAACATCTCGTCGAGCTATGGCAAAGCGTGGGTCAAGGTCAGCAGGTCGGCGATCTGGTATTCGAATACCTGCGACGC GATCTGCTGAACCTGATCCTGGGCAACTCGGACAACCACGGTCGTAATACATCAATTCTACGCATGGACAAAGGTGTGAA GCTGGCCCCTATCTATGACCTTGCCCCCATGGTCATGGATGATGAAGGCGTAACACGCACAACCAAGTGGCCGCAGCCCA TCGAGCTGGCTGGCGAGGTGAACTGGCGCAAAGCCTGTGAAGAGGTAGGTATATGGGCCGATGCCGAAGAGGTGTTCGAG CGGCTCAGAACCGCCGCACGTGACTTCATGGCCTTGCCCGACCTGCTGACCGACGAAGGCCTGCCTCCGGCGACCATGAA TCATCCACGTATCGCGCTACGCGCCTTCCTCAACGACTCGCCAGATGGAGACTCACCTGAATGGATATCACGGAGCGCGA CCGCATCCTGA
Upstream 100 bases:
>100_bases CTGGAAATAAGCACTAAAATACCTATTTAATCACTCAGCAGCGCAAAAAAGGTAATTTATTGCCTTTTAGCGAGATGAAG GCTACTTTTAAGGCAGTAAA
Downstream 100 bases:
>100_bases CGGAGGCACGGACGCAACTGGCGTCCGGCGATATCACCATTGGACAAGCCGTCCGCAGGCTCCGCAAGGAAATCACCGGC CTGCAGCAGGCCAGGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: HipA Domain Protein; Capsule Biosynthesis Protein
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPVADMYPLTLQIHTDHVWHDAMQLTFEQSALGLEGTCSYGYKQAYLVDALDVMGSTLSNAVSATLPLGWDLWRLPHAPS FLFDILPAGAARRSLLKRLGGERPGDLDLDLFLLSRCTPAPVGNLRIKEAADAIANSPMLGFSREEVISRDSRFLEYAYE QGAAIGGATGAGGEAPKLLLTEDRQGALHPDAALPDAEAARHWVVKFARNQASKTDQEILRSEFCFYRGLQKLGLDTVDA DGLSLEEGRKPSLWMKRFDRDVTVDGVVRTAVESMYSLAGVTEAGSYMSHTNVLQHLVELWQSVGQGQQVGDLVFEYLRR DLLNLILGNSDNHGRNTSILRMDKGVKLAPIYDLAPMVMDDEGVTRTTKWPQPIELAGEVNWRKACEEVGIWADAEEVFE RLRTAARDFMALPDLLTDEGLPPATMNHPRIALRAFLNDSPDGDSPEWISRSATAS
Sequences:
>Translated_456_residues MPVADMYPLTLQIHTDHVWHDAMQLTFEQSALGLEGTCSYGYKQAYLVDALDVMGSTLSNAVSATLPLGWDLWRLPHAPS FLFDILPAGAARRSLLKRLGGERPGDLDLDLFLLSRCTPAPVGNLRIKEAADAIANSPMLGFSREEVISRDSRFLEYAYE QGAAIGGATGAGGEAPKLLLTEDRQGALHPDAALPDAEAARHWVVKFARNQASKTDQEILRSEFCFYRGLQKLGLDTVDA DGLSLEEGRKPSLWMKRFDRDVTVDGVVRTAVESMYSLAGVTEAGSYMSHTNVLQHLVELWQSVGQGQQVGDLVFEYLRR DLLNLILGNSDNHGRNTSILRMDKGVKLAPIYDLAPMVMDDEGVTRTTKWPQPIELAGEVNWRKACEEVGIWADAEEVFE RLRTAARDFMALPDLLTDEGLPPATMNHPRIALRAFLNDSPDGDSPEWISRSATAS >Mature_455_residues PVADMYPLTLQIHTDHVWHDAMQLTFEQSALGLEGTCSYGYKQAYLVDALDVMGSTLSNAVSATLPLGWDLWRLPHAPSF LFDILPAGAARRSLLKRLGGERPGDLDLDLFLLSRCTPAPVGNLRIKEAADAIANSPMLGFSREEVISRDSRFLEYAYEQ GAAIGGATGAGGEAPKLLLTEDRQGALHPDAALPDAEAARHWVVKFARNQASKTDQEILRSEFCFYRGLQKLGLDTVDAD GLSLEEGRKPSLWMKRFDRDVTVDGVVRTAVESMYSLAGVTEAGSYMSHTNVLQHLVELWQSVGQGQQVGDLVFEYLRRD LLNLILGNSDNHGRNTSILRMDKGVKLAPIYDLAPMVMDDEGVTRTTKWPQPIELAGEVNWRKACEEVGIWADAEEVFER LRTAARDFMALPDLLTDEGLPPATMNHPRIALRAFLNDSPDGDSPEWISRSATAS
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50296; Mature: 50165
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVADMYPLTLQIHTDHVWHDAMQLTFEQSALGLEGTCSYGYKQAYLVDALDVMGSTLSN CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AVSATLPLGWDLWRLPHAPSFLFDILPAGAARRSLLKRLGGERPGDLDLDLFLLSRCTPA HHHHHCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC PVGNLRIKEAADAIANSPMLGFSREEVISRDSRFLEYAYEQGAAIGGATGAGGEAPKLLL CCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE TEDRQGALHPDAALPDAEAARHWVVKFARNQASKTDQEILRSEFCFYRGLQKLGLDTVDA ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC DGLSLEEGRKPSLWMKRFDRDVTVDGVVRTAVESMYSLAGVTEAGSYMSHTNVLQHLVEL CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQSVGQGQQVGDLVFEYLRRDLLNLILGNSDNHGRNTSILRMDKGVKLAPIYDLAPMVMD HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHCCCCEEC DEGVTRTTKWPQPIELAGEVNWRKACEEVGIWADAEEVFERLRTAARDFMALPDLLTDEG CCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LPPATMNHPRIALRAFLNDSPDGDSPEWISRSATAS CCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure PVADMYPLTLQIHTDHVWHDAMQLTFEQSALGLEGTCSYGYKQAYLVDALDVMGSTLSN CCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AVSATLPLGWDLWRLPHAPSFLFDILPAGAARRSLLKRLGGERPGDLDLDLFLLSRCTPA HHHHHCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC PVGNLRIKEAADAIANSPMLGFSREEVISRDSRFLEYAYEQGAAIGGATGAGGEAPKLLL CCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE TEDRQGALHPDAALPDAEAARHWVVKFARNQASKTDQEILRSEFCFYRGLQKLGLDTVDA ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC DGLSLEEGRKPSLWMKRFDRDVTVDGVVRTAVESMYSLAGVTEAGSYMSHTNVLQHLVEL CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQSVGQGQQVGDLVFEYLRRDLLNLILGNSDNHGRNTSILRMDKGVKLAPIYDLAPMVMD HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHCCCCEEC DEGVTRTTKWPQPIELAGEVNWRKACEEVGIWADAEEVFERLRTAARDFMALPDLLTDEG CCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LPPATMNHPRIALRAFLNDSPDGDSPEWISRSATAS CCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA