| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284110
Identifier: 146284110
GI number: 146284110
Start: 4104484
End: 4106007
Strand: Direct
Name: 146284110
Synonym: PST_3798
Alternate gene names: NA
Gene position: 4104484-4106007 (Clockwise)
Preceding gene: 146284107
Following gene: 146284111
Centisome position: 89.86
GC content: 67.98
Gene sequence:
>1524_bases ATGACCACCACACCCCCGCTGCCCCGTACGCTACCTGCCTGGATCAAGGCACTCGATGACGCTCCCCTGCCCGCCTTCGC CGCCGTTCATGGCAAGGTGCGCCTGGCGCTGCGCGACGCCAGCAAGTCGATGCGGCAGATTGCCGAGCTGATTCAGGACA GCCCGGTGCTGGCGCTGCGCTTCATTCAGGAAGCCAATCGCGGCATCGGCGATGGCCAGCCAGCGGAAAGCCTCGAGGTC GCGCTCAGCCGCATCGGCCTGCAACGCGCCGAGGCGCTGCTGGCTCGCATACCGGCGATGGAGGCCCAGGACATGCCGCG GCCGCTGCGTCAGGTGGTGCTGATCAGCCGGCATGCCAGCCAGCAGGCCAACGGACTGTTCGCCGCCCGCCTCGCACGGC TGTGGCAGGACATCCACTGGGGCAGCCTGCTGTTTCTCGCCCCGGCCTGGGCGCTGGTCGGCGCCTATCCGCATCTGCTG GACGCCTGGGAGCAGCGAGTGCTGGTCAAGGGCGAGCCGGCCAGCCGCGTCGAGCGCGAACTGCTCGGCGTTTCCCTGCT GGAGCTGTGCCTCGCGCTCGCCGAGCACTGGCGCCTGCCGGACTGGATCATTCAGGGCTACCGCCTGCTGGGCGCCGACC GGCGCAGGCTGATCAAGGCGCTGCACATTGCCCACGACAACGAGCACCCGCTGCACCAGCAGCAGATGCTCGACGCCGAT CCGGAATTGCGGCGCTGGCTGACGCTGCCGAGCAACACCATCGTACTGGCCAACGGCCTGGCGCTGTCGGCGCACCACAG CTGGAGCGGCATCCACAGCCTGCGCTGGCAACGCCTGGCCGGGCTGTATCTGCAGGTACCGCTGGGGGAATTGCAGCAGA TGGTGCACCAGCAGGCAGTCATCAGCGCCCGCGATTTCGGCGCGACCGATCTCTGGCACCCCGCCCAAGGGTTGCTGTGG CCGAGTGGCAGCCGCTTCCAGGTGTTGCGCGAAGTATCCGCGGCCACATCTGCTCCGACGGCCGATCTGACCGAATGGCG CGAACACTGCCGCCGGCTGCTTGCCGAGCCCAGCCCGTTCAGCAACGTGCTGCAGCTGACCGCCACCGCCAGCCAGGCCC TGACCAGCGCCGGCATGCAACGCTCGCTGGTATTGCTGGTGGATCGCAAGCAGAACCGCCTCGTCGCCCAGCAATGCGTC GGCCTGCCCGGCGATGCCGCACGGTTGACGCTTGCACCGGAGCAGAGCCAGGTCGTGCGTCGCCTGCTGGAAAAACCGGC CCAGCTGCGTCTGCAGCCGGCCAACATGGCACAGTTTTCCGCTCTGCTGCCCGGCGGCCTCAAGGCACTGTTCGCCGGCG AACACCTGCTACTGCGCTCCCTGGGCGTCGACGGTCGGGTATTGATGCTGGTCGTGGCCGATCAGAACGGCGCGCCGCTG TCCGACGCCAGCGTGCAAACATTCGCTAAAACATCACAATGCATCGAGCGCGCTTTGAGTCTGTTCGGCAGGCGCGGGGG CTGA
Upstream 100 bases:
>100_bases CGCCGTACGGCCTTGCAGAAGGAATGTTGGAAGAATTGTTCTGGTTATCGGAACTTTTGCGCCAGACTAAAGGCCATCCC GATGAAAAGCTAGTTCGGCC
Downstream 100 bases:
>100_bases GCTTTTTCGCTAGACTTCGCCCCTTCAACGACTAGTCGAGGCCTGCCGTGTCCGCCTTTTCCAATCTGCCACTGGTGATC GAGCCCGCCGATCTGGCCAC
Product: signal transduction protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTTTPPLPRTLPAWIKALDDAPLPAFAAVHGKVRLALRDASKSMRQIAELIQDSPVLALRFIQEANRGIGDGQPAESLEV ALSRIGLQRAEALLARIPAMEAQDMPRPLRQVVLISRHASQQANGLFAARLARLWQDIHWGSLLFLAPAWALVGAYPHLL DAWEQRVLVKGEPASRVERELLGVSLLELCLALAEHWRLPDWIIQGYRLLGADRRRLIKALHIAHDNEHPLHQQQMLDAD PELRRWLTLPSNTIVLANGLALSAHHSWSGIHSLRWQRLAGLYLQVPLGELQQMVHQQAVISARDFGATDLWHPAQGLLW PSGSRFQVLREVSAATSAPTADLTEWREHCRRLLAEPSPFSNVLQLTATASQALTSAGMQRSLVLLVDRKQNRLVAQQCV GLPGDAARLTLAPEQSQVVRRLLEKPAQLRLQPANMAQFSALLPGGLKALFAGEHLLLRSLGVDGRVLMLVVADQNGAPL SDASVQTFAKTSQCIERALSLFGRRGG
Sequences:
>Translated_507_residues MTTTPPLPRTLPAWIKALDDAPLPAFAAVHGKVRLALRDASKSMRQIAELIQDSPVLALRFIQEANRGIGDGQPAESLEV ALSRIGLQRAEALLARIPAMEAQDMPRPLRQVVLISRHASQQANGLFAARLARLWQDIHWGSLLFLAPAWALVGAYPHLL DAWEQRVLVKGEPASRVERELLGVSLLELCLALAEHWRLPDWIIQGYRLLGADRRRLIKALHIAHDNEHPLHQQQMLDAD PELRRWLTLPSNTIVLANGLALSAHHSWSGIHSLRWQRLAGLYLQVPLGELQQMVHQQAVISARDFGATDLWHPAQGLLW PSGSRFQVLREVSAATSAPTADLTEWREHCRRLLAEPSPFSNVLQLTATASQALTSAGMQRSLVLLVDRKQNRLVAQQCV GLPGDAARLTLAPEQSQVVRRLLEKPAQLRLQPANMAQFSALLPGGLKALFAGEHLLLRSLGVDGRVLMLVVADQNGAPL SDASVQTFAKTSQCIERALSLFGRRGG >Mature_506_residues TTTPPLPRTLPAWIKALDDAPLPAFAAVHGKVRLALRDASKSMRQIAELIQDSPVLALRFIQEANRGIGDGQPAESLEVA LSRIGLQRAEALLARIPAMEAQDMPRPLRQVVLISRHASQQANGLFAARLARLWQDIHWGSLLFLAPAWALVGAYPHLLD AWEQRVLVKGEPASRVERELLGVSLLELCLALAEHWRLPDWIIQGYRLLGADRRRLIKALHIAHDNEHPLHQQQMLDADP ELRRWLTLPSNTIVLANGLALSAHHSWSGIHSLRWQRLAGLYLQVPLGELQQMVHQQAVISARDFGATDLWHPAQGLLWP SGSRFQVLREVSAATSAPTADLTEWREHCRRLLAEPSPFSNVLQLTATASQALTSAGMQRSLVLLVDRKQNRLVAQQCVG LPGDAARLTLAPEQSQVVRRLLEKPAQLRLQPANMAQFSALLPGGLKALFAGEHLLLRSLGVDGRVLMLVVADQNGAPLS DASVQTFAKTSQCIERALSLFGRRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55895; Mature: 55763
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPPLPRTLPAWIKALDDAPLPAFAAVHGKVRLALRDASKSMRQIAELIQDSPVLALR CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHH FIQEANRGIGDGQPAESLEVALSRIGLQRAEALLARIPAMEAQDMPRPLRQVVLISRHAS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH QQANGLFAARLARLWQDIHWGSLLFLAPAWALVGAYPHLLDAWEQRVLVKGEPASRVERE HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCHHHHHHH LLGVSLLELCLALAEHWRLPDWIIQGYRLLGADRRRLIKALHIAHDNEHPLHQQQMLDAD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PELRRWLTLPSNTIVLANGLALSAHHSWSGIHSLRWQRLAGLYLQVPLGELQQMVHQQAV HHHHHHEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH ISARDFGATDLWHPAQGLLWPSGSRFQVLREVSAATSAPTADLTEWREHCRRLLAEPSPF HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH SNVLQLTATASQALTSAGMQRSLVLLVDRKQNRLVAQQCVGLPGDAARLTLAPEQSQVVR HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH RLLEKPAQLRLQPANMAQFSALLPGGLKALFAGEHLLLRSLGVDGRVLMLVVADQNGAPL HHHCCCHHEEECCCCHHHHHHHCCCHHHHHHHCHHHHHHHCCCCCEEEEEEEECCCCCCC SDASVQTFAKTSQCIERALSLFGRRGG CCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTTPPLPRTLPAWIKALDDAPLPAFAAVHGKVRLALRDASKSMRQIAELIQDSPVLALR CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHH FIQEANRGIGDGQPAESLEVALSRIGLQRAEALLARIPAMEAQDMPRPLRQVVLISRHAS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH QQANGLFAARLARLWQDIHWGSLLFLAPAWALVGAYPHLLDAWEQRVLVKGEPASRVERE HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCHHHHHHH LLGVSLLELCLALAEHWRLPDWIIQGYRLLGADRRRLIKALHIAHDNEHPLHQQQMLDAD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PELRRWLTLPSNTIVLANGLALSAHHSWSGIHSLRWQRLAGLYLQVPLGELQQMVHQQAV HHHHHHEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH ISARDFGATDLWHPAQGLLWPSGSRFQVLREVSAATSAPTADLTEWREHCRRLLAEPSPF HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH SNVLQLTATASQALTSAGMQRSLVLLVDRKQNRLVAQQCVGLPGDAARLTLAPEQSQVVR HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH RLLEKPAQLRLQPANMAQFSALLPGGLKALFAGEHLLLRSLGVDGRVLMLVVADQNGAPL HHHCCCHHEEECCCCHHHHHHHCCCHHHHHHHCHHHHHHHCCCCCEEEEEEEECCCCCCC SDASVQTFAKTSQCIERALSLFGRRGG CCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA