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The map label for this gene is ureD-2 [H]

Identifier: 146284038

GI number: 146284038

Start: 4029163

End: 4030251

Strand: Direct

Name: ureD-2 [H]

Synonym: PST_3726

Alternate gene names: 146284038

Gene position: 4029163-4030251 (Clockwise)

Preceding gene: 146284037

Following gene: 146284039

Centisome position: 88.22

GC content: 68.6

Gene sequence:

>1089_bases
ATGCGGCCTGTTCGGAATGGACCAAGCAGCGCTTCTTCGCCCGGCTCGGCGCATCCCGTCAGCCCTGAGCAAGAGCGCAG
CAGGCGCACCACGAAAGGGCATGGCGAACCGGGCGGCAGCAGATCGCACCGTAACGGTGCATATCCCACGGGTCTCATCG
TCGACGATGCCTCGCACGCCCCGAAGCTGCGCATACCGTCGGATGGAGGCACGACTATTGCTGTCTGCCCAGTCAACTAC
CACCGGCAGCCGCGCATGACCGTTCTGACTCACCCCTTCACCCCGCACTGGCAGGCCGAGCTCGAGCTCGGCTATACCCG
CATCGGCGACGCGACGCGCCCGGTGCTGCGCCGCCATAGCGGACCATTACGGGTGCAGAAGCATCTGTATCCCGAAGGGT
CGGAAGTCTGCCAGCACATCATCGTCCACCCCCCGGGCGGCATCGCCGGCGGCGATCGGCTGGACATCAGCGTCACGCTC
GGCCCCGGCGCCTGGGCGCAGCTGACCAGCCCTGGTGCAGCCAAGTGGTATCGCGCCGCCAGCCCGGCCTTTCAGGACCT
GCAGCTGCGCGTCGAGGCCGGTGCCACGCTGGAATGGCTGCCGCAGGAGACCATCGTCTATTCCGCGGCTCAGGCCGAGC
TGAACACTCGCATTGAGCTGCACGGCGACGCCCGGCTGTTCTACTGGGACATCGTCGCCCTCGGCCGGCCGGCAGCAGGC
GAGCGCTTCGACGCCGGGCATTTCCAGGCGCGCCTGGATATCCGTCGCGACGACCGGCTGATCTGGCACGAGCGCCAGCG
CATCGCCGGCGCCGATGCGTTGCTCGACTCACCGATAGGCCTCGACGGGCGTTCGGTGTTCGCCACCCTCATCGCCAGCG
GCGAGCTCGACGCGGACCTGCTGGAACGCTGCCGTGGATTGCCCAGCCGCGTGCGCGGTGACCTGACGCAACTGCCGGGG
CTCATCGTGGCGCGCTGTCTGGCCGACGAGGCGCTGCACACCCGTGCCTGGCTGATCGACCTGTGGCGGCTGTTGCGCCC
CGCACTGCTGGGCCGCGAAGCGGTACCGCCGCGAATCTGGAGTACCTGA

Upstream 100 bases:

>100_bases
TTGACCGTGCTGCTGCCCTATACGCCGGTGGGCGGCTGGTTCGCCCTGCAGCCGCTGCCGGCCACGGTGCTCGGGGCGGT
TCTGCTGATCACGCTGCTCT

Downstream 100 bases:

>100_bases
ATGATCGGTGGGCACGGCTGCGCCGCTGCCCTCCCTACGCCGGCGCGCCTGCGTGCACGTCGCCCTGAACAACGCTGCGT
GGTCTCGACCACCGGCCGGT

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRPVRNGPSSASSPGSAHPVSPEQERSRRTTKGHGEPGGSRSHRNGAYPTGLIVDDASHAPKLRIPSDGGTTIAVCPVNY
HRQPRMTVLTHPFTPHWQAELELGYTRIGDATRPVLRRHSGPLRVQKHLYPEGSEVCQHIIVHPPGGIAGGDRLDISVTL
GPGAWAQLTSPGAAKWYRAASPAFQDLQLRVEAGATLEWLPQETIVYSAAQAELNTRIELHGDARLFYWDIVALGRPAAG
ERFDAGHFQARLDIRRDDRLIWHERQRIAGADALLDSPIGLDGRSVFATLIASGELDADLLERCRGLPSRVRGDLTQLPG
LIVARCLADEALHTRAWLIDLWRLLRPALLGREAVPPRIWST

Sequences:

>Translated_362_residues
MRPVRNGPSSASSPGSAHPVSPEQERSRRTTKGHGEPGGSRSHRNGAYPTGLIVDDASHAPKLRIPSDGGTTIAVCPVNY
HRQPRMTVLTHPFTPHWQAELELGYTRIGDATRPVLRRHSGPLRVQKHLYPEGSEVCQHIIVHPPGGIAGGDRLDISVTL
GPGAWAQLTSPGAAKWYRAASPAFQDLQLRVEAGATLEWLPQETIVYSAAQAELNTRIELHGDARLFYWDIVALGRPAAG
ERFDAGHFQARLDIRRDDRLIWHERQRIAGADALLDSPIGLDGRSVFATLIASGELDADLLERCRGLPSRVRGDLTQLPG
LIVARCLADEALHTRAWLIDLWRLLRPALLGREAVPPRIWST
>Mature_362_residues
MRPVRNGPSSASSPGSAHPVSPEQERSRRTTKGHGEPGGSRSHRNGAYPTGLIVDDASHAPKLRIPSDGGTTIAVCPVNY
HRQPRMTVLTHPFTPHWQAELELGYTRIGDATRPVLRRHSGPLRVQKHLYPEGSEVCQHIIVHPPGGIAGGDRLDISVTL
GPGAWAQLTSPGAAKWYRAASPAFQDLQLRVEAGATLEWLPQETIVYSAAQAELNTRIELHGDARLFYWDIVALGRPAAG
ERFDAGHFQARLDIRRDDRLIWHERQRIAGADALLDSPIGLDGRSVFATLIASGELDADLLERCRGLPSRVRGDLTQLPG
LIVARCLADEALHTRAWLIDLWRLLRPALLGREAVPPRIWST

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 39745; Mature: 39745

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVRNGPSSASSPGSAHPVSPEQERSRRTTKGHGEPGGSRSHRNGAYPTGLIVDDASHA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PKLRIPSDGGTTIAVCPVNYHRQPRMTVLTHPFTPHWQAELELGYTRIGDATRPVLRRHS
CEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECEECCCCHHHHHHHHCC
GPLRVQKHLYPEGSEVCQHIIVHPPGGIAGGDRLDISVTLGPGAWAQLTSPGAAKWYRAA
CCCEEHHHCCCCHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHC
SPAFQDLQLRVEAGATLEWLPQETIVYSAAQAELNTRIELHGDARLFYWDIVALGRPAAG
CCCCCCEEEEEECCCEEEECCCHHHEEHHHHHCCCCEEEEECCCEEEEEEEEECCCCCCC
ERFDAGHFQARLDIRRDDRLIWHERQRIAGADALLDSPIGLDGRSVFATLIASGELDADL
CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHH
LERCRGLPSRVRGDLTQLPGLIVARCLADEALHTRAWLIDLWRLLRPALLGREAVPPRIW
HHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ST
CC
>Mature Secondary Structure
MRPVRNGPSSASSPGSAHPVSPEQERSRRTTKGHGEPGGSRSHRNGAYPTGLIVDDASHA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PKLRIPSDGGTTIAVCPVNYHRQPRMTVLTHPFTPHWQAELELGYTRIGDATRPVLRRHS
CEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECEECCCCHHHHHHHHCC
GPLRVQKHLYPEGSEVCQHIIVHPPGGIAGGDRLDISVTLGPGAWAQLTSPGAAKWYRAA
CCCEEHHHCCCCHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHC
SPAFQDLQLRVEAGATLEWLPQETIVYSAAQAELNTRIELHGDARLFYWDIVALGRPAAG
CCCCCCEEEEEECCCEEEECCCHHHEEHHHHHCCCCEEEEECCCEEEEEEEEECCCCCCC
ERFDAGHFQARLDIRRDDRLIWHERQRIAGADALLDSPIGLDGRSVFATLIASGELDADL
CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHH
LERCRGLPSRVRGDLTQLPGLIVARCLADEALHTRAWLIDLWRLLRPALLGREAVPPRIW
HHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ST
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA