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The map label for this gene is zntR [H]

Identifier: 146283734

GI number: 146283734

Start: 3691117

End: 3691755

Strand: Direct

Name: zntR [H]

Synonym: PST_3417

Alternate gene names: 146283734

Gene position: 3691117-3691755 (Clockwise)

Preceding gene: 146283732

Following gene: 146283736

Centisome position: 80.81

GC content: 51.17

Gene sequence:

>639_bases
ATGCGCATTGGTCAATTAGCAAGGCTAATAGGGATTGATACACAGACGATCCGCTTCTATGAGCAGCAGGGCTTGCTGCC
ACCGCCTGATCGCCAGGCGAACGGCTATCGTGTCTACACCGAGAAGCATGGCGAGCGGCTAGCCTTCATCCGGAGCTGCC
GAATCCTGAATCTGTCACTTCCAGAGATTCACGCACTCCAACGCTACCAGGATGACCCTCGCCAGCCTTGTACGGCCGTT
AATGCCTTGCTCGATGAACACATTTCTCAAGTCAAGTCGCAGATAACCGCTCTGCAGTCACTCGAACGACAACTCGTATC
ACTGCGGGCTAATTGCAGTGATGGGCGGGAAGTTGAGGCTTGTGGAATTCTCGCTGGCATTAGCGAGGACGCGTGCATTA
AATTAATGGCGTTGGGGCTTACTGGCCTGTTAGCCGTTGTTTATACCAACCGGGGCGCTCAAAAACTCAACCGTATGGAT
CTTCCCATCAGGGGTCTTAACCTTCATCTCGTACGTTTGAACTTTGCCGTTAGTTCTATAACTCTGAATCATTCCGGTCG
TACCGGTCGTCCCTGCAGGTGCTATGCTCAGCACTTTACCTTCTTTAACAAGTATTTTAAGGGTGGGATTTGTTACTGA

Upstream 100 bases:

>100_bases
TTGCTCATGATACGGCTCCACTTGAAATCGAAGATGGGGTCATTAAAAGCCCTATAGCTACTACAAGGTCAATAATGCAG
AGCCGATAAGGATTCACACG

Downstream 100 bases:

>100_bases
CGCACTCTCAAGGCGCTGCATTGTTAGTTCCCCTCCGTCTTCAGCCATAGCGAGCGAAGAAGCAGCGGCCAGAAAGAACG
GCAGGATTACTTTAGCAGGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRIGQLARLIGIDTQTIRFYEQQGLLPPPDRQANGYRVYTEKHGERLAFIRSCRILNLSLPEIHALQRYQDDPRQPCTAV
NALLDEHISQVKSQITALQSLERQLVSLRANCSDGREVEACGILAGISEDACIKLMALGLTGLLAVVYTNRGAQKLNRMD
LPIRGLNLHLVRLNFAVSSITLNHSGRTGRPCRCYAQHFTFFNKYFKGGICY

Sequences:

>Translated_212_residues
MRIGQLARLIGIDTQTIRFYEQQGLLPPPDRQANGYRVYTEKHGERLAFIRSCRILNLSLPEIHALQRYQDDPRQPCTAV
NALLDEHISQVKSQITALQSLERQLVSLRANCSDGREVEACGILAGISEDACIKLMALGLTGLLAVVYTNRGAQKLNRMD
LPIRGLNLHLVRLNFAVSSITLNHSGRTGRPCRCYAQHFTFFNKYFKGGICY
>Mature_212_residues
MRIGQLARLIGIDTQTIRFYEQQGLLPPPDRQANGYRVYTEKHGERLAFIRSCRILNLSLPEIHALQRYQDDPRQPCTAV
NALLDEHISQVKSQITALQSLERQLVSLRANCSDGREVEACGILAGISEDACIKLMALGLTGLLAVVYTNRGAQKLNRMD
LPIRGLNLHLVRLNFAVSSITLNHSGRTGRPCRCYAQHFTFFNKYFKGGICY

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786695, Length=128, Percent_Identity=34.375, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1789687, Length=132, Percent_Identity=34.8484848484849, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 23860; Mature: 23860

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGQLARLIGIDTQTIRFYEQQGLLPPPDRQANGYRVYTEKHGERLAFIRSCRILNLSL
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCEEEECCC
PEIHALQRYQDDPRQPCTAVNALLDEHISQVKSQITALQSLERQLVSLRANCSDGREVEA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
CGILAGISEDACIKLMALGLTGLLAVVYTNRGAQKLNRMDLPIRGLNLHLVRLNFAVSSI
HHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCEEEEEEEEEEEEEE
TLNHSGRTGRPCRCYAQHFTFFNKYFKGGICY
EEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIGQLARLIGIDTQTIRFYEQQGLLPPPDRQANGYRVYTEKHGERLAFIRSCRILNLSL
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCEEEECCC
PEIHALQRYQDDPRQPCTAVNALLDEHISQVKSQITALQSLERQLVSLRANCSDGREVEA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
CGILAGISEDACIKLMALGLTGLLAVVYTNRGAQKLNRMDLPIRGLNLHLVRLNFAVSSI
HHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCEEEEEEEEEEEEEE
TLNHSGRTGRPCRCYAQHFTFFNKYFKGGICY
EEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]