| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283729
Identifier: 146283729
GI number: 146283729
Start: 3686311
End: 3687555
Strand: Direct
Name: 146283729
Synonym: PST_3412
Alternate gene names: NA
Gene position: 3686311-3687555 (Clockwise)
Preceding gene: 146283728
Following gene: 146283731
Centisome position: 80.71
GC content: 55.82
Gene sequence:
>1245_bases TTGAATGGTATCGGATGGATCTCATCCAATCCAGAGCTCTGGGGTGCTTTGCTGTACGTACTGGCTGGCCAGTTTGAGCA CGCTGGGGTTGTTGGGGACATCGTTGTAAGGTCTGACCAGGCGTCGGTCGCCCATGAGCTTGGCGGCAATCCAGACAGAG CTGTGGCAGCACCGCGTAACACTCTTCAGCGTCAGCTCCTCGATGGGCTGCGCTACCTGGTGAAGAACGAGCTCAAGTTG AATCAGCCAGACGCTTCCGATGGCTGGATCACGGCCGATGCGATCTGGCTGGTCAGCAAGACCGTTTCGGATCGGCTGCG TGCTCACCTCCTCAGCCAAGGGATTGAGGGTGTTCCGGACCGCAACTCCACTCTCTTCAATGTCTTTCAGGATGCCGGCC TGATTGTTGCGAATCCTGCTGGCAAAGCTATTTGGGATGCCGAAATCCTGAGCCCTACGGGATGGAAGAACGCATTCACG TTCTTGAGAGTTTCACCTTCACTCATATGGGCAGCTGGCGAAGACCGCCCGGAGCCTTTTGGCGGCTCGGTGCAAGTCCT CAACGAAGAAGCAGCCCCTGCCGCAGCTTCCGAAGCGCAGGAGGAAAAGCCCAGCCTTACTGCCGGGGGCGGCGATGCCG TTGCGGCAGAGCCTCAAGGGGACGAACCCGCAAGTGACCATGGACCGCAACCCGATGAGGTAGATGATACGGACTACCTT CTGGATCTGATGGATATGCGTGACGCGCCGACCAATTCGGTACCCGCCCCGGCGATGCCGGCGGCGTCCGAGGTCGAAGC TCAGTCAGACACTGCCGCGACCGCTACCATCGCTGGCCCGATCGGCGACACGCTAGGTCACCTTTTCATGCACTGGCTAA AAGTGGGTGTAGGAACCCACAAGATCATTATCAATGATGCAAAAGCCAAGGTTCACACCGTCAACGGCACGGCTTTTCTG GTGACTCCTGAAATATTCAGAAGGTATGCCCAAGAGCATCCGACCCTCTTCTCAGCGAGGGCTGGCGAAGGACAGCCATG GCTGCAGGTCCAAAAGTCGTTCGAAAAGCTGAAGCTTCACGTTAAGAAGAGCAACGGACATAACATCTGGACGTGCGAAG TCTTTGGACCTCGTAAAACGAAAACACTGAAGGGTTATATGCTCAAAAAACCCGGCGACGTATTCACAACTGAGATGCTG GATAATCCCAATCTCAAACTTTGTGAGAGTCAGGATGATCACTAG
Upstream 100 bases:
>100_bases TAAACCCCGCAGCGCTGCTTCACCAATGAATGCCCTCTCTCTGCCGCTCACGAATCAACGCACACACGAATTCCGCGTAT GCGTTCTATGGGTACATTGA
Downstream 100 bases:
>100_bases CTATCATTGGATAGTTGCGCTGAGGTCTGGACTACCCTAATTATGGCGGATTGACTTTGTTGATGACCGCTTGTGACTGG GCAGCTAGGCCAGCCAAGTA
Product: HD-superfamily hydrolase
Products: NA
Alternate protein names: Helicase; Relaxase-Related Protein; HD-Superfamily Hydrolase
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MNGIGWISSNPELWGALLYVLAGQFEHAGVVGDIVVRSDQASVAHELGGNPDRAVAAPRNTLQRQLLDGLRYLVKNELKL NQPDASDGWITADAIWLVSKTVSDRLRAHLLSQGIEGVPDRNSTLFNVFQDAGLIVANPAGKAIWDAEILSPTGWKNAFT FLRVSPSLIWAAGEDRPEPFGGSVQVLNEEAAPAAASEAQEEKPSLTAGGGDAVAAEPQGDEPASDHGPQPDEVDDTDYL LDLMDMRDAPTNSVPAPAMPAASEVEAQSDTAATATIAGPIGDTLGHLFMHWLKVGVGTHKIIINDAKAKVHTVNGTAFL VTPEIFRRYAQEHPTLFSARAGEGQPWLQVQKSFEKLKLHVKKSNGHNIWTCEVFGPRKTKTLKGYMLKKPGDVFTTEML DNPNLKLCESQDDH
Sequences:
>Translated_414_residues MNGIGWISSNPELWGALLYVLAGQFEHAGVVGDIVVRSDQASVAHELGGNPDRAVAAPRNTLQRQLLDGLRYLVKNELKL NQPDASDGWITADAIWLVSKTVSDRLRAHLLSQGIEGVPDRNSTLFNVFQDAGLIVANPAGKAIWDAEILSPTGWKNAFT FLRVSPSLIWAAGEDRPEPFGGSVQVLNEEAAPAAASEAQEEKPSLTAGGGDAVAAEPQGDEPASDHGPQPDEVDDTDYL LDLMDMRDAPTNSVPAPAMPAASEVEAQSDTAATATIAGPIGDTLGHLFMHWLKVGVGTHKIIINDAKAKVHTVNGTAFL VTPEIFRRYAQEHPTLFSARAGEGQPWLQVQKSFEKLKLHVKKSNGHNIWTCEVFGPRKTKTLKGYMLKKPGDVFTTEML DNPNLKLCESQDDH >Mature_414_residues MNGIGWISSNPELWGALLYVLAGQFEHAGVVGDIVVRSDQASVAHELGGNPDRAVAAPRNTLQRQLLDGLRYLVKNELKL NQPDASDGWITADAIWLVSKTVSDRLRAHLLSQGIEGVPDRNSTLFNVFQDAGLIVANPAGKAIWDAEILSPTGWKNAFT FLRVSPSLIWAAGEDRPEPFGGSVQVLNEEAAPAAASEAQEEKPSLTAGGGDAVAAEPQGDEPASDHGPQPDEVDDTDYL LDLMDMRDAPTNSVPAPAMPAASEVEAQSDTAATATIAGPIGDTLGHLFMHWLKVGVGTHKIIINDAKAKVHTVNGTAFL VTPEIFRRYAQEHPTLFSARAGEGQPWLQVQKSFEKLKLHVKKSNGHNIWTCEVFGPRKTKTLKGYMLKKPGDVFTTEML DNPNLKLCESQDDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44712; Mature: 44712
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIGWISSNPELWGALLYVLAGQFEHAGVVGDIVVRSDQASVAHELGGNPDRAVAAPRN CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCHH TLQRQLLDGLRYLVKNELKLNQPDASDGWITADAIWLVSKTVSDRLRAHLLSQGIEGVPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RNSTLFNVFQDAGLIVANPAGKAIWDAEILSPTGWKNAFTFLRVSPSLIWAAGEDRPEPF CCCHHHHHHHCCCEEEECCCCCCEECHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCC GGSVQVLNEEAAPAAASEAQEEKPSLTAGGGDAVAAEPQGDEPASDHGPQPDEVDDTDYL CCCEEEECCCCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH LDLMDMRDAPTNSVPAPAMPAASEVEAQSDTAATATIAGPIGDTLGHLFMHWLKVGVGTH HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCE KIIINDAKAKVHTVNGTAFLVTPEIFRRYAQEHPTLFSARAGEGQPWLQVQKSFEKLKLH EEEEECCCEEEEEECCEEEEECHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHEEEE VKKSNGHNIWTCEVFGPRKTKTLKGYMLKKPGDVFTTEMLDNPNLKLCESQDDH EEECCCCEEEEEEEECCCCCCEECCEEECCCCCEEEHHHCCCCCCEECCCCCCC >Mature Secondary Structure MNGIGWISSNPELWGALLYVLAGQFEHAGVVGDIVVRSDQASVAHELGGNPDRAVAAPRN CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCHH TLQRQLLDGLRYLVKNELKLNQPDASDGWITADAIWLVSKTVSDRLRAHLLSQGIEGVPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RNSTLFNVFQDAGLIVANPAGKAIWDAEILSPTGWKNAFTFLRVSPSLIWAAGEDRPEPF CCCHHHHHHHCCCEEEECCCCCCEECHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCC GGSVQVLNEEAAPAAASEAQEEKPSLTAGGGDAVAAEPQGDEPASDHGPQPDEVDDTDYL CCCEEEECCCCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH LDLMDMRDAPTNSVPAPAMPAASEVEAQSDTAATATIAGPIGDTLGHLFMHWLKVGVGTH HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCE KIIINDAKAKVHTVNGTAFLVTPEIFRRYAQEHPTLFSARAGEGQPWLQVQKSFEKLKLH EEEEECCCEEEEEECCEEEEECHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHEEEE VKKSNGHNIWTCEVFGPRKTKTLKGYMLKKPGDVFTTEMLDNPNLKLCESQDDH EEECCCCEEEEEEEECCCCCCEECCEEECCCCCEEEHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA