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The map label for this gene is yoeC [H]

Identifier: 146283724

GI number: 146283724

Start: 3681629

End: 3682249

Strand: Direct

Name: yoeC [H]

Synonym: PST_3407

Alternate gene names: 146283724

Gene position: 3681629-3682249 (Clockwise)

Preceding gene: 146283723

Following gene: 146283725

Centisome position: 80.61

GC content: 54.59

Gene sequence:

>621_bases
ATGAACATCACTGCTACCTGCACCCGCCGGCCCTGGAACAAAGGAAAGTTGGTCGGACAGAAAACCCCGCTCCGGCTGAG
AGATATCTGGGCCATCCGAGTAAGGCTTCAGCTTGCAGAACGAACCCGGGATCTGGCTTTGTTCGATCTGGCCATCGACA
GCAAGCTTCGAGCCTGCGACTTAACCAAGCTCCGTGTATGCGACGTTGCTCATGGCGAGCATGTGTCATCACGAGCAATG
GTTATGCAGCAGAAAACGAAGCGACCAGTGCAGTTCGAAATTACTGAGCAAACACGGTCTGCTCTCGCGGCCTGGATACA
CCAAGCCCAGCTCCGTAGCCAGGACTGCCTTTTCCCGAGCAGGCTGCACACCTCAGACCATCTATCCACTCGTCAATACG
CTCGTATCGTCAAAGGCTGGGTGCAAGCCATTGGCCTTGATCCGGCCATGTATGGCACTCACACAATGAGACGTACAAAG
GCATCACTGATCTATCGCAGGACAAAGAACTTGCGGGCCGTTCAACTTCTGCTTGGCCATACGAAGCTGGAGAGCACCGT
TCGATATCTTGGGATTGAGGTCGACGACGCCTTGGAAATGGCAGAGCAGACCGAGGTTTGA

Upstream 100 bases:

>100_bases
AAATCTCAAAGTAAAACCTTGTTGAATGTCCGGTTCTGGCCGGTTAGCGACCACTTCTCAGGCTAGCCATGCTTGTCCTC
CCACATGTGGAGGACTTGCC

Downstream 100 bases:

>100_bases
CCATGTATAGCGACGGTCGAAGTCAGGCCGCCGCTAACCGGCCAGAAGCGGAAGCTGGCGACAGTGCATCGGGTGCCATG
TTGTAGCCATCTGTCGATGG

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNITATCTRRPWNKGKLVGQKTPLRLRDIWAIRVRLQLAERTRDLALFDLAIDSKLRACDLTKLRVCDVAHGEHVSSRAM
VMQQKTKRPVQFEITEQTRSALAAWIHQAQLRSQDCLFPSRLHTSDHLSTRQYARIVKGWVQAIGLDPAMYGTHTMRRTK
ASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV

Sequences:

>Translated_206_residues
MNITATCTRRPWNKGKLVGQKTPLRLRDIWAIRVRLQLAERTRDLALFDLAIDSKLRACDLTKLRVCDVAHGEHVSSRAM
VMQQKTKRPVQFEITEQTRSALAAWIHQAQLRSQDCLFPSRLHTSDHLSTRQYARIVKGWVQAIGLDPAMYGTHTMRRTK
ASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV
>Mature_206_residues
MNITATCTRRPWNKGKLVGQKTPLRLRDIWAIRVRLQLAERTRDLALFDLAIDSKLRACDLTKLRVCDVAHGEHVSSRAM
VMQQKTKRPVQFEITEQTRSALAAWIHQAQLRSQDCLFPSRLHTSDHLSTRQYARIVKGWVQAIGLDPAMYGTHTMRRTK
ASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 23688; Mature: 23688

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITATCTRRPWNKGKLVGQKTPLRLRDIWAIRVRLQLAERTRDLALFDLAIDSKLRACD
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCC
LTKLRVCDVAHGEHVSSRAMVMQQKTKRPVQFEITEQTRSALAAWIHQAQLRSQDCLFPS
CCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH
RLHTSDHLSTRQYARIVKGWVQAIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLLGH
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TKLESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNITATCTRRPWNKGKLVGQKTPLRLRDIWAIRVRLQLAERTRDLALFDLAIDSKLRACD
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCC
LTKLRVCDVAHGEHVSSRAMVMQQKTKRPVQFEITEQTRSALAAWIHQAQLRSQDCLFPS
CCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH
RLHTSDHLSTRQYARIVKGWVQAIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLLGH
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TKLESTVRYLGIEVDDALEMAEQTEV
HHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]