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The map label for this gene is ydaV [C]

Identifier: 146283713

GI number: 146283713

Start: 3670080

End: 3670730

Strand: Direct

Name: ydaV [C]

Synonym: PST_3396

Alternate gene names: 146283713

Gene position: 3670080-3670730 (Clockwise)

Preceding gene: 146283712

Following gene: 146283714

Centisome position: 80.35

GC content: 66.51

Gene sequence:

>651_bases
TTGAGCTTCGATGAACGCCTCGGCCTGCTGCTCGATCGCGAACTGGCCTGGCGCGACGACAAGCGTCTGGAGCGGCTGCG
CAAACAGGCCAAGCTCAAGTACGCCGGCGCCTGCCTGGAAGACCTCGATCGCCGCCGTGGCCGCACTCTGGACGAGCGCC
TGATCGCGACCCTGGCCAGCGGCGACTGGCTCCGCCAACGGCACAACCTGTTGCTGACCGGCCCAACCGGCGTCGGCAAG
ACCTGGCTCGCCTGCGCCCTGGGCCACCAGGCCTGCCGCCAGGGCTACAGCGCGCTGTACCTGCGCACCCCGCGCCTGCT
AGAGCAACTGCGCATCGCCCACGGCGACGGTAGCTTCGGGCGCACCCTGCAACAGCTGGCTAAGGTCGACGTTCTGATTT
TGGACGACTGGGCCCTGGCCCCGCTGGAGGAAAACGCCCGGCATGACCTGCTGGAAGTGATCGACGACCGCGCCGGTAGC
CGCTCCACCATCCTGACCAGCCAATTGCCGGTCGAGCACTGGCACGGCTGGATCAACGACCCCACGCTGGCCGACGCATT
GCTCGACCGCCTGGTGCACAACGCCTACCGAATCATGATGAAAGGTGAGTCACTGCGGCGGAAAAACACGGAGGAAGAAG
CCGCATCGTGA

Upstream 100 bases:

>100_bases
GATGATGACCCAACACACCCTGAGCCAGCTGCACCAACTGCGGCTGAGCGGCATGGCCCGAGCGCTGGAAGAGCAGTGGA
CGCTGCCGGCCAGCCACAGC

Downstream 100 bases:

>100_bases
CCGATGCGGTTAGAATTTAAACCCCGCGCAATCGGGTGGAGGCACCGGTCACGTTGTTAGCGAAATGAGCGGTCACGTTC
ACCGAAATCCGCAGCTATGC

Product: ISPsy14, transposition helper protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSFDERLGLLLDRELAWRDDKRLERLRKQAKLKYAGACLEDLDRRRGRTLDERLIATLASGDWLRQRHNLLLTGPTGVGK
TWLACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFGRTLQQLAKVDVLILDDWALAPLEENARHDLLEVIDDRAGS
RSTILTSQLPVEHWHGWINDPTLADALLDRLVHNAYRIMMKGESLRRKNTEEEAAS

Sequences:

>Translated_216_residues
MSFDERLGLLLDRELAWRDDKRLERLRKQAKLKYAGACLEDLDRRRGRTLDERLIATLASGDWLRQRHNLLLTGPTGVGK
TWLACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFGRTLQQLAKVDVLILDDWALAPLEENARHDLLEVIDDRAGS
RSTILTSQLPVEHWHGWINDPTLADALLDRLVHNAYRIMMKGESLRRKNTEEEAAS
>Mature_215_residues
SFDERLGLLLDRELAWRDDKRLERLRKQAKLKYAGACLEDLDRRRGRTLDERLIATLASGDWLRQRHNLLLTGPTGVGKT
WLACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFGRTLQQLAKVDVLILDDWALAPLEENARHDLLEVIDDRAGSR
STILTSQLPVEHWHGWINDPTLADALLDRLVHNAYRIMMKGESLRRKNTEEEAAS

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 24681; Mature: 24549

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDERLGLLLDRELAWRDDKRLERLRKQAKLKYAGACLEDLDRRRGRTLDERLIATLAS
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
GDWLRQRHNLLLTGPTGVGKTWLACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFG
CHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCHHH
RTLQQLAKVDVLILDDWALAPLEENARHDLLEVIDDRAGSRSTILTSQLPVEHWHGWIND
HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCC
PTLADALLDRLVHNAYRIMMKGESLRRKNTEEEAAS
CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCC
>Mature Secondary Structure 
SFDERLGLLLDRELAWRDDKRLERLRKQAKLKYAGACLEDLDRRRGRTLDERLIATLAS
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
GDWLRQRHNLLLTGPTGVGKTWLACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFG
CHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCHHH
RTLQQLAKVDVLILDDWALAPLEENARHDLLEVIDDRAGSRSTILTSQLPVEHWHGWIND
HHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCC
PTLADALLDRLVHNAYRIMMKGESLRRKNTEEEAAS
CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7698671 [H]