| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is gluQ [H]
Identifier: 146283610
GI number: 146283610
Start: 3559690
End: 3560595
Strand: Direct
Name: gluQ [H]
Synonym: PST_3290
Alternate gene names: 146283610
Gene position: 3559690-3560595 (Clockwise)
Preceding gene: 146283609
Following gene: 146283611
Centisome position: 77.94
GC content: 67.44
Gene sequence:
>906_bases ATGTCCTCCTCCGCCCCGCCCCAGCCCGCACGCTACATCGGTCGCTTTGCACCGACCCCCAGCGGCTACCTGCACTTCGG CTCGCTGATCGCGGCCCTCGCTTCCTATCTCGACGCCCGTTCGGTCGGCGGCCTTTGGTTGCTGCGCATGGAAGACATCG ATCCGCCACGGGAGATGCCCGGCGCCCAGCGGGCCATCGTCGAGACGCTGCAGAGCTACGGCTTCGAATGGGACGGCGAC ATGCTGCGCCAGAGCGAACGTCACGCTGCGTATCGGGACGCCATCGAACGGCTGCTGGATGAAGGCCTGGCGTATGCGTG CACCTGCTCGCGCAAGCAGCTCGAAGGCTACCCGGGCCCCTACCCCGGCTTCTGCCGCGCCGCCGGTCGCAGCCTCGAGG ATGCTGCCATCCGCCTGCGCGTACCCGATCGTGAATACGTCTTCATCGATCGTGTGCAAGGCGAGTTCCGCCAGCATCTG GGCCGCGAGGTCGGCGATTTTGTCATTCGCCGCCGCGACGGCCTGATTGCCTATCAGCTGGCCGTGGTACTGGATGACGC CTGGCAAGGTGTCACCGATGTGGTGCGTGGCGCCGACCTGCTCGATTCAACGCCGCGCCAGCTTTATCTGCAGGAAGTCC TCGGCCTGCCACAACCACGCTACCTGCACCTGCCGCTGATCATCCAGCCGGACGGACACAAGCTCGGCAAGAGCTATCGC TCGCCACCGCTGCAAGCCCAGGAGGCCAGCCCACTGCTGCTTCGCGCGCTGCGCGCCCTTGGCCAGCAACCGCCAGCGGA ACTGGACGGCGCGCTGCCGGCGGACATTCTCGGCTGGGCCGTCGCCCACTGGAATGCAGCACGCATCCCGCGGGTCCGCA CCCTCGCCGAAGCCCAGCTGCGCTGA
Upstream 100 bases:
>100_bases TCGGTTCCTGATCCCGAACGGGGCGCTACGGCGCCCCGCTTCATTTCCAGGCCCTGCACCGTTTCATCCGCCTCGCCATC ACCGATCGCGCCGGCCCGCC
Downstream 100 bases:
>100_bases GCCACGCATGGATCGAACCACCCGAGGCGAGCTTTTGCCTGCCGCTGGTGGCTTGCCGCGTGCCGCTGCTCTACCATCGC CCTCACTTCCGACACGAGAC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSSSAPPQPARYIGRFAPTPSGYLHFGSLIAALASYLDARSVGGLWLLRMEDIDPPREMPGAQRAIVETLQSYGFEWDGD MLRQSERHAAYRDAIERLLDEGLAYACTCSRKQLEGYPGPYPGFCRAAGRSLEDAAIRLRVPDREYVFIDRVQGEFRQHL GREVGDFVIRRRDGLIAYQLAVVLDDAWQGVTDVVRGADLLDSTPRQLYLQEVLGLPQPRYLHLPLIIQPDGHKLGKSYR SPPLQAQEASPLLLRALRALGQQPPAELDGALPADILGWAVAHWNAARIPRVRTLAEAQLR
Sequences:
>Translated_301_residues MSSSAPPQPARYIGRFAPTPSGYLHFGSLIAALASYLDARSVGGLWLLRMEDIDPPREMPGAQRAIVETLQSYGFEWDGD MLRQSERHAAYRDAIERLLDEGLAYACTCSRKQLEGYPGPYPGFCRAAGRSLEDAAIRLRVPDREYVFIDRVQGEFRQHL GREVGDFVIRRRDGLIAYQLAVVLDDAWQGVTDVVRGADLLDSTPRQLYLQEVLGLPQPRYLHLPLIIQPDGHKLGKSYR SPPLQAQEASPLLLRALRALGQQPPAELDGALPADILGWAVAHWNAARIPRVRTLAEAQLR >Mature_300_residues SSSAPPQPARYIGRFAPTPSGYLHFGSLIAALASYLDARSVGGLWLLRMEDIDPPREMPGAQRAIVETLQSYGFEWDGDM LRQSERHAAYRDAIERLLDEGLAYACTCSRKQLEGYPGPYPGFCRAAGRSLEDAAIRLRVPDREYVFIDRVQGEFRQHLG REVGDFVIRRRDGLIAYQLAVVLDDAWQGVTDVVRGADLLDSTPRQLYLQEVLGLPQPRYLHLPLIIQPDGHKLGKSYRS PPLQAQEASPLLLRALRALGQQPPAELDGALPADILGWAVAHWNAARIPRVRTLAEAQLR
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=248, Percent_Identity=37.5, Blast_Score=134, Evalue=7e-32, Organism=Escherichia coli, GI226510925, Length=283, Percent_Identity=49.1166077738516, Blast_Score=266, Evalue=8e-73, Organism=Escherichia coli, GI1788743, Length=240, Percent_Identity=37.9166666666667, Blast_Score=153, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71993394, Length=248, Percent_Identity=33.8709677419355, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324540, Length=256, Percent_Identity=33.203125, Blast_Score=142, Evalue=9e-35, Organism=Drosophila melanogaster, GI24665321, Length=248, Percent_Identity=36.6935483870968, Blast_Score=144, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 33571; Mature: 33440
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAPPQPARYIGRFAPTPSGYLHFGSLIAALASYLDARSVGGLWLLRMEDIDPPREMP CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCC GAQRAIVETLQSYGFEWDGDMLRQSERHAAYRDAIERLLDEGLAYACTCSRKQLEGYPGP CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCC YPGFCRAAGRSLEDAAIRLRVPDREYVFIDRVQGEFRQHLGREVGDFVIRRRDGLIAYQL CCHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVVLDDAWQGVTDVVRGADLLDSTPRQLYLQEVLGLPQPRYLHLPLIIQPDGHKLGKSYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHC SPPLQAQEASPLLLRALRALGQQPPAELDGALPADILGWAVAHWNAARIPRVRTLAEAQL CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHC R C >Mature Secondary Structure SSSAPPQPARYIGRFAPTPSGYLHFGSLIAALASYLDARSVGGLWLLRMEDIDPPREMP CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCC GAQRAIVETLQSYGFEWDGDMLRQSERHAAYRDAIERLLDEGLAYACTCSRKQLEGYPGP CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCC YPGFCRAAGRSLEDAAIRLRVPDREYVFIDRVQGEFRQHLGREVGDFVIRRRDGLIAYQL CCHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVVLDDAWQGVTDVVRGADLLDSTPRQLYLQEVLGLPQPRYLHLPLIIQPDGHKLGKSYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHC SPPLQAQEASPLLLRALRALGQQPPAELDGALPADILGWAVAHWNAARIPRVRTLAEAQL CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA