| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283583
Identifier: 146283583
GI number: 146283583
Start: 3529932
End: 3531575
Strand: Direct
Name: 146283583
Synonym: PST_3263
Alternate gene names: NA
Gene position: 3529932-3531575 (Clockwise)
Preceding gene: 146283579
Following gene: 146283584
Centisome position: 77.29
GC content: 64.23
Gene sequence:
>1644_bases ATGCCGGCGACTTTACGACTGTGTGGACTGCTTCGCAGTGGACTCGCACGCCCCGTTCAAGAACTTCGACAAGGAATGAC CGTGAGCCAAGCACTGATCGCCGCCCTGCAGAATCCTGCCCTGTATCCGCACCCCACCGAAAGCTTTCGGGTCATCGAAA CCCATATTTCCTGGGTGATCCTCACCGGCCAGTACGCCTACAAGATCAAGAAGCCGGTGGACTTCGGCTTCCTCAACTTC ACCGATCTGGCCTCGCGCAAGCATTTCTGCGAAGAAGAGCTGCGCCTCAACCAGCGCATGGCACCTGACCTCTACCTGGA AGTGTTGCCTGTCACCGGCTCGCCTGATGCTCCGGTGATCGGCGGCGACGGCAATCCCTTCGAGTACGTGCTGAAGATGC GCGAGTTCCCGCAGTCCCAGCTGCTGGCCGAGGTCCAGGCCCGCGGCGAGCTGACCGATGCGCATATCGACGCTCTGGCC GAGCAGATCGCAAGCTTCCACCTCAGCACCCCGCAGGTACAGCCGGACCACGCGCTGAACAGCGCCGATGCGATCGTCGC ACCGATGCGGCAGAACTTCGAACAGATACGCCCGCTGCTCAGCGAGCCGGAAGACCTGCGCCAGCTGGACGCTCTCGAAG ACTGGACCGAAACCAGCATCACGCGCCTGCGCCCACTGCTCGAACAGCGCTGCCAGCAAGGCTTCGTTCGCGAATGCCAT GGCGACCTTCACCTGGGCAATGCCACGCTGATCGATGGCAAGGTCGTGCTGTTCGACTGCATCGAATTCAACGAGCCGTT CCGCCTGATCGATGTCGCCTCGGATGCCGCCTTCCTGGCCATGGACCTTGAGGATCGCGGACTGAAATGCCAGGCCCGGC GCTTCATCAATGGCTGGCTGGAGCACACCGGCGACTATGCCGCGCTGGCGTTGCTCAACCTCTATAAGGCCTATCGTGCG TTGGTTCGCGGCAAGGTCAGCCTGTTCCGCCTGTATCAGGAGCAGGACGCCGTGCAGCGCAAGGTTATCCTGCGCCAGTA CCGCAGTTACGCCAATCTCGCCGAAAGCTACAGCGCGATTCCGTCCCGCTTCCTCGCCATCACTCACGGTGTATCGGCCG TCGGCAAGAGTCACGTCGCGCTACGCCTGGTCGAAGCGCTCGGCGCGGTGCGTCTGCGCTCGGATGTCGAGCGCAAGCGT CTGCACGGCGAGCAGGCCGAGGCGCAGGCAGGCCAGCTCGATAGCGGCATCTACAGCCAGCAAGCCAGCGAAGCGACCTA TCGCCACCTGCACCAGCTGGCGACTGCCGCACTGCAGGCCGGGTTCGCCGTGGTCATCGACGCGGCCTACCTGAAGCAGT CGCAACGCCAGGCGGCATGGCAGGCAGCCGAAGCGACCGGCGTGCCGTTCCTCATCCTCGATTGCGAGGCTCCGGAAGCG GTGATCGCCCAGTGGCTCGCTCAGCGTCAGGCCGAAGGCACCGATCCGTCCGACGCGACAATGGAGGTGGTCCGCGCGCA GCAGGCCAGCCGCGAGCCGCTGAGCGACAGCGAGCGCCTGCATAGCTGCCGGGTCCAGACGCAGGATGCCGGCAGCCTCG ACGAGCTGGTCGCCAACATCCGCCAGCGCCTGCCGGGGCTTTGA
Upstream 100 bases:
>100_bases GGGGGGAGCGAGGTTTAGTCATGGCGGCGCATTATACGCACTTTGCCGCAGCGGATTGACGGCCTCTCAGCGGTTTGCAG CGCAACGCTCAGCGGCCATA
Downstream 100 bases:
>100_bases CCGTTAGGCACCGTCGCGGGCAGGCCGCGGCGGTGCCTCTATACTCCCGGTATAACAACCGTGGGAATGCCTATGCCTGC CAGCGAACCCCGCCTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MPATLRLCGLLRSGLARPVQELRQGMTVSQALIAALQNPALYPHPTESFRVIETHISWVILTGQYAYKIKKPVDFGFLNF TDLASRKHFCEEELRLNQRMAPDLYLEVLPVTGSPDAPVIGGDGNPFEYVLKMREFPQSQLLAEVQARGELTDAHIDALA EQIASFHLSTPQVQPDHALNSADAIVAPMRQNFEQIRPLLSEPEDLRQLDALEDWTETSITRLRPLLEQRCQQGFVRECH GDLHLGNATLIDGKVVLFDCIEFNEPFRLIDVASDAAFLAMDLEDRGLKCQARRFINGWLEHTGDYAALALLNLYKAYRA LVRGKVSLFRLYQEQDAVQRKVILRQYRSYANLAESYSAIPSRFLAITHGVSAVGKSHVALRLVEALGAVRLRSDVERKR LHGEQAEAQAGQLDSGIYSQQASEATYRHLHQLATAALQAGFAVVIDAAYLKQSQRQAAWQAAEATGVPFLILDCEAPEA VIAQWLAQRQAEGTDPSDATMEVVRAQQASREPLSDSERLHSCRVQTQDAGSLDELVANIRQRLPGL
Sequences:
>Translated_547_residues MPATLRLCGLLRSGLARPVQELRQGMTVSQALIAALQNPALYPHPTESFRVIETHISWVILTGQYAYKIKKPVDFGFLNF TDLASRKHFCEEELRLNQRMAPDLYLEVLPVTGSPDAPVIGGDGNPFEYVLKMREFPQSQLLAEVQARGELTDAHIDALA EQIASFHLSTPQVQPDHALNSADAIVAPMRQNFEQIRPLLSEPEDLRQLDALEDWTETSITRLRPLLEQRCQQGFVRECH GDLHLGNATLIDGKVVLFDCIEFNEPFRLIDVASDAAFLAMDLEDRGLKCQARRFINGWLEHTGDYAALALLNLYKAYRA LVRGKVSLFRLYQEQDAVQRKVILRQYRSYANLAESYSAIPSRFLAITHGVSAVGKSHVALRLVEALGAVRLRSDVERKR LHGEQAEAQAGQLDSGIYSQQASEATYRHLHQLATAALQAGFAVVIDAAYLKQSQRQAAWQAAEATGVPFLILDCEAPEA VIAQWLAQRQAEGTDPSDATMEVVRAQQASREPLSDSERLHSCRVQTQDAGSLDELVANIRQRLPGL >Mature_546_residues PATLRLCGLLRSGLARPVQELRQGMTVSQALIAALQNPALYPHPTESFRVIETHISWVILTGQYAYKIKKPVDFGFLNFT DLASRKHFCEEELRLNQRMAPDLYLEVLPVTGSPDAPVIGGDGNPFEYVLKMREFPQSQLLAEVQARGELTDAHIDALAE QIASFHLSTPQVQPDHALNSADAIVAPMRQNFEQIRPLLSEPEDLRQLDALEDWTETSITRLRPLLEQRCQQGFVRECHG DLHLGNATLIDGKVVLFDCIEFNEPFRLIDVASDAAFLAMDLEDRGLKCQARRFINGWLEHTGDYAALALLNLYKAYRAL VRGKVSLFRLYQEQDAVQRKVILRQYRSYANLAESYSAIPSRFLAITHGVSAVGKSHVALRLVEALGAVRLRSDVERKRL HGEQAEAQAGQLDSGIYSQQASEATYRHLHQLATAALQAGFAVVIDAAYLKQSQRQAAWQAAEATGVPFLILDCEAPEAV IAQWLAQRQAEGTDPSDATMEVVRAQQASREPLSDSERLHSCRVQTQDAGSLDELVANIRQRLPGL
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 60963; Mature: 60832
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATLRLCGLLRSGLARPVQELRQGMTVSQALIAALQNPALYPHPTESFRVIETHISWVI CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEE LTGQYAYKIKKPVDFGFLNFTDLASRKHFCEEELRLNQRMAPDLYLEVLPVTGSPDAPVI EECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE GGDGNPFEYVLKMREFPQSQLLAEVQARGELTDAHIDALAEQIASFHLSTPQVQPDHALN CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SADAIVAPMRQNFEQIRPLLSEPEDLRQLDALEDWTETSITRLRPLLEQRCQQGFVRECH CCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLHLGNATLIDGKVVLFDCIEFNEPFRLIDVASDAAFLAMDLEDRGLKCQARRFINGWL CCEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHH EHTGDYAALALLNLYKAYRALVRGKVSLFRLYQEQDAVQRKVILRQYRSYANLAESYSAI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSRFLAITHGVSAVGKSHVALRLVEALGAVRLRSDVERKRLHGEQAEAQAGQLDSGIYSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH QASEATYRHLHQLATAALQAGFAVVIDAAYLKQSQRQAAWQAAEATGVPFLILDCEAPEA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH VIAQWLAQRQAEGTDPSDATMEVVRAQQASREPLSDSERLHSCRVQTQDAGSLDELVANI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH RQRLPGL HHHCCCC >Mature Secondary Structure PATLRLCGLLRSGLARPVQELRQGMTVSQALIAALQNPALYPHPTESFRVIETHISWVI CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEE LTGQYAYKIKKPVDFGFLNFTDLASRKHFCEEELRLNQRMAPDLYLEVLPVTGSPDAPVI EECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE GGDGNPFEYVLKMREFPQSQLLAEVQARGELTDAHIDALAEQIASFHLSTPQVQPDHALN CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SADAIVAPMRQNFEQIRPLLSEPEDLRQLDALEDWTETSITRLRPLLEQRCQQGFVRECH CCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLHLGNATLIDGKVVLFDCIEFNEPFRLIDVASDAAFLAMDLEDRGLKCQARRFINGWL CCEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHH EHTGDYAALALLNLYKAYRALVRGKVSLFRLYQEQDAVQRKVILRQYRSYANLAESYSAI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSRFLAITHGVSAVGKSHVALRLVEALGAVRLRSDVERKRLHGEQAEAQAGQLDSGIYSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH QASEATYRHLHQLATAALQAGFAVVIDAAYLKQSQRQAAWQAAEATGVPFLILDCEAPEA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH VIAQWLAQRQAEGTDPSDATMEVVRAQQASREPLSDSERLHSCRVQTQDAGSLDELVANI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH RQRLPGL HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]