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The map label for this gene is yggA [H]

Identifier: 146283458

GI number: 146283458

Start: 3369737

End: 3370345

Strand: Direct

Name: yggA [H]

Synonym: PST_3131

Alternate gene names: 146283458

Gene position: 3369737-3370345 (Clockwise)

Preceding gene: 146283456

Following gene: 146283459

Centisome position: 73.78

GC content: 68.47

Gene sequence:

>609_bases
ATGAATGCGATCTGGCAGAGCTATATCAACGGACTTCTGGTGGCAGCGGGGCTGATCATGGCGATCGGCGCCCAGAACGC
CTTCGTGCTCGCCCAGAGCCTGCGCCGCGAACACCACCTGCCGGTAGCAGCGCTGTGCATAGTCTGCGATGTCCTGTTGG
TCAGCCTCGGAGTGTTCGGGCTGGCCGCACTGCTGGCGAGCAGCCCGCTGTTGCTGGAGACCACCCGCTGGGGCGGCGTG
GCCTTTCTGCTCTGGTACGGCACCCTGGCCCTGCGCCGCGCGGCCAGACCGCAGAGCCTGCGCAGCGAAGATGCACAGCC
TCGCCCCCTGCGCGCCGTGCTGTTGGCAGCGCTGGCGGTGACGCTGCTCAACCCACATGTCTACCTGGATACCGTGGTGC
TGATCGGCACGCTCGGCGCGCAGCAACCGGAACCGGGCGCTTACACGCTCGGCGCGGCCAGCGCGTCGACCCTCTGGTTT
ATGACGCTGGCCCTGGGCGGTGCCTGGCTGGCGCCTTGGCTTGCCCGCCCGCTGACCTGGCGCCTGATCGACCTCGGCGT
GGCCGCCATGATGTTCGCCATCGCCGCGCAACTCGCATTCGCCGGCTGA

Upstream 100 bases:

>100_bases
TCGAACATCAGTTTTCCTAATGCCACCTGAGCATAACTGGTTTCTCTTATAGCTTGCCGATGCCCAGACTCGCCAGCAGA
AAACGAACGAGGCGTGCGGC

Downstream 100 bases:

>100_bases
ACTGGCGGTACGCTGCGGCGCCCTGCCACGTCCATTTTTTGCACTGACCAAGGAACGCCATCGCCTGCCCTGCGGTCCAC
GCAAGGCAGAGCCGATCGTC

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFGLAALLASSPLLLETTRWGGV
AFLLWYGTLALRRAARPQSLRSEDAQPRPLRAVLLAALAVTLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWF
MTLALGGAWLAPWLARPLTWRLIDLGVAAMMFAIAAQLAFAG

Sequences:

>Translated_202_residues
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFGLAALLASSPLLLETTRWGGV
AFLLWYGTLALRRAARPQSLRSEDAQPRPLRAVLLAALAVTLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWF
MTLALGGAWLAPWLARPLTWRLIDLGVAAMMFAIAAQLAFAG
>Mature_202_residues
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFGLAALLASSPLLLETTRWGGV
AFLLWYGTLALRRAARPQSLRSEDAQPRPLRAVLLAALAVTLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWF
MTLALGGAWLAPWLARPLTWRLIDLGVAAMMFAIAAQLAFAG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=198, Percent_Identity=46.969696969697, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21436; Mature: 21436

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LAALLASSPLLLETTRWGGVAFLLWYGTLALRRAARPQSLRSEDAQPRPLRAVLLAALAV
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHH
TLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWFMTLALGGAWLAPWLARPLTW
HHHCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHCCHHH
RLIDLGVAAMMFAIAAQLAFAG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LAALLASSPLLLETTRWGGVAFLLWYGTLALRRAARPQSLRSEDAQPRPLRAVLLAALAV
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHH
TLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWFMTLALGGAWLAPWLARPLTW
HHHCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHCCHHH
RLIDLGVAAMMFAIAAQLAFAG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]