| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is pncB1 [H]
Identifier: 146283452
GI number: 146283452
Start: 3362462
End: 3363661
Strand: Direct
Name: pncB1 [H]
Synonym: PST_3125
Alternate gene names: 146283452
Gene position: 3362462-3363661 (Clockwise)
Preceding gene: 146283451
Following gene: 146283454
Centisome position: 73.62
GC content: 63.92
Gene sequence:
>1200_bases ATGAGCAGCGCATTTTCGGACCGCATCATCCAGAGCCTGCTGGATACCGACTTCTACAAGCTCACCATGATGCAGGCGGT CCTGCATCACTACCCTAATGCGGAAGTGGAATGGGCCTTTCGCAGCCGCTCCGGCGAAGACCTGAGCCCTTACCTGAGCG AGATCCGCCACCAGATCGAAGCGCTGGCCGAGCTGCAGATGTCCGCCGAGGAATTGGCCTTCCTCGAGCGCGTCCCCTAT ATGCAGCCCGACTTCATCCGCTTTCTCGGGCTGTTCCGCTTCGACCTCCGCTACCTGCGGGTGGATGTCGAGGACGGCGA GCTGGTGATGTATCTGCGCGGGCCCTGGCTGCATGTGATCCTGTTCGAAGTACCGCTGCTGGCCATCGTCAGCGAGGTGC GCAACCGCGCGCGCTATGCGCAGGTGACGCTGGAACAGGCGGGCGCCAGGCTGGACGAAAAGTTCGCCTGGCTGCGCAGG CAGGCGACTGCCGAGGAGCTGGCCAGCTTCACCCTGGCTGACTTCGGCACCCGGCGACGATTCTCCTTCGCGGTTCAGGC CATGGTGGTCGAGCGCCTGCGCTGCGACTTTCCCGGCCGTTTCGTCGGCACCAGCAACGTGCATCTGGCCCGCACGCTGG ACGTGAAACCCATGGGCACCATGGCCCACGAATGGGTCATGGCGCACCAGCAGCTCGGCCCGCGCCTCATCGACAGTCAG GTCGCGGCGCTCGACTGCTGGGTTCGCGAATACCGTGGCGCACTGGGCATCGCGCTGACCGACTGCATCACCATGGATGC CTTCCTGCGCGACTTCGATCTGTACTTCGCCAAGCTGTTCGATGGCCTGCGCCACGACTCGGGCGATCCCTTGGAATGGG CGGAGAAAGCCATCGCACACTACCGGCGCCTCGGCATCGATCCGAAAAGCCGTCAGCTGATCTTTTCCGACGGTCTGGAT TTCGCCAAGGCACTGCACATCCACCGCGCCCTGATCGACCGCAGCAGACCCAGCTTCGGCATAGGCACCGGGCTCACCTG CGACATTCCGGGAGTGGAGCCGACCAACATGGTGATCAAGATGACCGCCTGCAACGGCCAGCCGGTGGCAAAGATCTCCG ACTCGCCGGGCAAGACCATGTGCCGCGACGAAGCCTTCGTCAGCTACCTGCGCCACGTGTTCGGCGTCGCTGCCGGCTGA
Upstream 100 bases:
>100_bases AATGGCAGCACCCGCTCGGCAACACGCCAAAGGCCTTCGGGCAGCGCCTTGCTCGCCATTTGCCGCTACCATCACCCGAT GTCCAGAACGGAACGACCCG
Downstream 100 bases:
>100_bases CCCGGACGCGCCGCACGCTACCCTGCGGCTAGCCGCTCAGCGCGAGCGACCCCTGCTGCAGCACCGCATCCGGCTCCATT GCGCAGAGCCGATTGCGCCC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSSAFSDRIIQSLLDTDFYKLTMMQAVLHHYPNAEVEWAFRSRSGEDLSPYLSEIRHQIEALAELQMSAEELAFLERVPY MQPDFIRFLGLFRFDLRYLRVDVEDGELVMYLRGPWLHVILFEVPLLAIVSEVRNRARYAQVTLEQAGARLDEKFAWLRR QATAEELASFTLADFGTRRRFSFAVQAMVVERLRCDFPGRFVGTSNVHLARTLDVKPMGTMAHEWVMAHQQLGPRLIDSQ VAALDCWVREYRGALGIALTDCITMDAFLRDFDLYFAKLFDGLRHDSGDPLEWAEKAIAHYRRLGIDPKSRQLIFSDGLD FAKALHIHRALIDRSRPSFGIGTGLTCDIPGVEPTNMVIKMTACNGQPVAKISDSPGKTMCRDEAFVSYLRHVFGVAAG
Sequences:
>Translated_399_residues MSSAFSDRIIQSLLDTDFYKLTMMQAVLHHYPNAEVEWAFRSRSGEDLSPYLSEIRHQIEALAELQMSAEELAFLERVPY MQPDFIRFLGLFRFDLRYLRVDVEDGELVMYLRGPWLHVILFEVPLLAIVSEVRNRARYAQVTLEQAGARLDEKFAWLRR QATAEELASFTLADFGTRRRFSFAVQAMVVERLRCDFPGRFVGTSNVHLARTLDVKPMGTMAHEWVMAHQQLGPRLIDSQ VAALDCWVREYRGALGIALTDCITMDAFLRDFDLYFAKLFDGLRHDSGDPLEWAEKAIAHYRRLGIDPKSRQLIFSDGLD FAKALHIHRALIDRSRPSFGIGTGLTCDIPGVEPTNMVIKMTACNGQPVAKISDSPGKTMCRDEAFVSYLRHVFGVAAG >Mature_398_residues SSAFSDRIIQSLLDTDFYKLTMMQAVLHHYPNAEVEWAFRSRSGEDLSPYLSEIRHQIEALAELQMSAEELAFLERVPYM QPDFIRFLGLFRFDLRYLRVDVEDGELVMYLRGPWLHVILFEVPLLAIVSEVRNRARYAQVTLEQAGARLDEKFAWLRRQ ATAEELASFTLADFGTRRRFSFAVQAMVVERLRCDFPGRFVGTSNVHLARTLDVKPMGTMAHEWVMAHQQLGPRLIDSQV AALDCWVREYRGALGIALTDCITMDAFLRDFDLYFAKLFDGLRHDSGDPLEWAEKAIAHYRRLGIDPKSRQLIFSDGLDF AKALHIHRALIDRSRPSFGIGTGLTCDIPGVEPTNMVIKMTACNGQPVAKISDSPGKTMCRDEAFVSYLRHVFGVAAG
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=394, Percent_Identity=51.5228426395939, Blast_Score=405, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6324783, Length=422, Percent_Identity=31.5165876777251, Blast_Score=199, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 45421; Mature: 45290
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAFSDRIIQSLLDTDFYKLTMMQAVLHHYPNAEVEWAFRSRSGEDLSPYLSEIRHQIE CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH ALAELQMSAEELAFLERVPYMQPDFIRFLGLFRFDLRYLRVDVEDGELVMYLRGPWLHVI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEHEEEEECCCCEEEEECCCHHHHH LFEVPLLAIVSEVRNRARYAQVTLEQAGARLDEKFAWLRRQATAEELASFTLADFGTRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FSFAVQAMVVERLRCDFPGRFVGTSNVHLARTLDVKPMGTMAHEWVMAHQQLGPRLIDSQ HHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHH VAALDCWVREYRGALGIALTDCITMDAFLRDFDLYFAKLFDGLRHDSGDPLEWAEKAIAH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YRRLGIDPKSRQLIFSDGLDFAKALHIHRALIDRSRPSFGIGTGLTCDIPGVEPTNMVIK HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEE MTACNGQPVAKISDSPGKTMCRDEAFVSYLRHVFGVAAG EEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAFSDRIIQSLLDTDFYKLTMMQAVLHHYPNAEVEWAFRSRSGEDLSPYLSEIRHQIE CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH ALAELQMSAEELAFLERVPYMQPDFIRFLGLFRFDLRYLRVDVEDGELVMYLRGPWLHVI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEHEEEEECCCCEEEEECCCHHHHH LFEVPLLAIVSEVRNRARYAQVTLEQAGARLDEKFAWLRRQATAEELASFTLADFGTRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FSFAVQAMVVERLRCDFPGRFVGTSNVHLARTLDVKPMGTMAHEWVMAHQQLGPRLIDSQ HHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHH VAALDCWVREYRGALGIALTDCITMDAFLRDFDLYFAKLFDGLRHDSGDPLEWAEKAIAH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YRRLGIDPKSRQLIFSDGLDFAKALHIHRALIDRSRPSFGIGTGLTCDIPGVEPTNMVIK HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEE MTACNGQPVAKISDSPGKTMCRDEAFVSYLRHVFGVAAG EEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA