Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is ttuD [H]

Identifier: 146283444

GI number: 146283444

Start: 3355689

End: 3357269

Strand: Direct

Name: ttuD [H]

Synonym: PST_3117

Alternate gene names: 146283444

Gene position: 3355689-3357269 (Clockwise)

Preceding gene: 146283443

Following gene: 146283445

Centisome position: 73.47

GC content: 67.99

Gene sequence:

>1581_bases
ATGGGCCAGCGACCCCACCTTCAGGGACAGACAGACCGGGTGGTGGGTCATCGCAACGCCCGCGCAGCGCCGCTCAAAGG
GCCGGGCCAGAGGTGCGTCAGGTCGGAATCATCGCGTCTCCCCACGACCAGCATGACCTGCGCATCTCAGCCCGACCGCC
GTCACCAGACGGCACCTTTTCGATTCGCCCGGCACAAGGAGTCACGGCCCGACTGCCGGGCGGGTCGATTTCAATTGCAG
ACCTTAGCGCTTGCATTGGCGAGCCCTAAGGTCTGGAATCGGTTGCAGACCTCATACAAGGAGCTTCAGATGACCCTCGA
CCCGCAAGCCCTGCTGCGCCAGTTGTTCGACAGTGCCATCGAGGCCGCCCATCCACGCCATGTACTCGCCGACCATCTGC
CCGAAGACCGCAGCGGCCGTGCCATCGTCATCGGCGCCGGCAAGGCGGCCGCGGCCATGGCCGAAGCCATCGAGAAGGTC
TGGGAAGGTGAACTGTCCGGACTGGTGGTGACCCGCTACGAACACCACGCCGACTGCCGGCGTATCGAAGTGGTGGAAGC
CGCACACCCGGTCCCGGACGACGCCGGCGAGCGCGTCGCCCGCCGTGTGCTGGAGCTGGTCAGCAACCTCGAGGAAAGCG
ATCGGGTGATCTTCCTGCTCTCCGGCGGCGGCTCGTCATTGCTGGCATTGCCGGCCGAAGGCATCTCGCTGGCGGACAAG
CAGGCCATCAACAAGGCGCTGCTGCGCTCCGGCGCGCACATCGGCGAGATGAACTGCGTGCGCAAGCACCTCTCGGCGAT
CAAGGGCGGCCGCCTGGCCAGAGCCTGCTGGCCGGCCAGCGTGTACACCTACGCGATCTCCGACGTGCCCGGCGACGAAG
CCACGGTGATCGCCTCCGGCCCCACCGTCGCCGACCCCACCACGTCGGCCGAGGCGCTGGCGATTCTCGAGCGTTACCAC
ATCGAGGTGCCAGCCAATGTGCGCGCCTGGCTCGAGGATCCGCGCTCGGAAACCCTCAAGCCGGGCGATCCGATGCTCTC
GCGCAGCCACTTCCAGCTGATCGCCACGCCGCAGCAGTCCCTCGATGCCGCGGCCCAGGCGGCCCTTGACGCCGGTATCA
CCCCACTGATCCTCGGTGATCTGGAAGGCGAAGCACGCGAAGTGGCCAAGGTGCATGCCGGCATCGCCCGCCAGGTGGTG
CTGCACGGCCAGCCGATCGCCGCGCCCTGCGTGATCCTGTCCGGCGGCGAGACCACCGTCACCGTGCGCGGCAACGGACG
CGGCGGGCGCAATGCCGAGTTCCTGCTCGCCCTGACCGAAGCGTTGCAAGGCCTGCCCGGCGTTTACGCCCTGGCCGGCG
ACACCGATGGCATCGACGGCTCGGAGGACAACGCCGGCGCGCTGATGACCCCGGACAGCTTTGCCCGCGCCGAGGCGCTG
GGCCTGCGTGCCGCCGACTCGCTGGCCGACAACGACGGCTATGGTTACTTCGCCGCGCTGGACAGCCTGATCGTCACCGG
CCCGACGCGCACCAACGTCAACGACTTTCGCGCCATCCTGATCCTGCCGTCGTCGGATTGA

Upstream 100 bases:

>100_bases
ATCGGCGGCAGCGGCTGGGACCATTCGGCGCTGATCAAGGGCCTGGAGCACATGGCCAACTTCTCGATCCGCAAGGAGTA
AAGCCTTCGAGCACGCTGCA

Downstream 100 bases:

>100_bases
CGGCCTCCACCTCGTTCAGGCGCGCATCAGAACAACAACTGCCCCAGAGCACCGCCATGACACACGACAAGAAGGTCAAG
ATTCTCGCTACCCTCGGCCC

Product: hydroxypyruvate reductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MGQRPHLQGQTDRVVGHRNARAAPLKGPGQRCVRSESSRLPTTSMTCASQPDRRHQTAPFRFARHKESRPDCRAGRFQLQ
TLALALASPKVWNRLQTSYKELQMTLDPQALLRQLFDSAIEAAHPRHVLADHLPEDRSGRAIVIGAGKAAAAMAEAIEKV
WEGELSGLVVTRYEHHADCRRIEVVEAAHPVPDDAGERVARRVLELVSNLEESDRVIFLLSGGGSSLLALPAEGISLADK
QAINKALLRSGAHIGEMNCVRKHLSAIKGGRLARACWPASVYTYAISDVPGDEATVIASGPTVADPTTSAEALAILERYH
IEVPANVRAWLEDPRSETLKPGDPMLSRSHFQLIATPQQSLDAAAQAALDAGITPLILGDLEGEAREVAKVHAGIARQVV
LHGQPIAAPCVILSGGETTVTVRGNGRGGRNAEFLLALTEALQGLPGVYALAGDTDGIDGSEDNAGALMTPDSFARAEAL
GLRAADSLADNDGYGYFAALDSLIVTGPTRTNVNDFRAILILPSSD

Sequences:

>Translated_526_residues
MGQRPHLQGQTDRVVGHRNARAAPLKGPGQRCVRSESSRLPTTSMTCASQPDRRHQTAPFRFARHKESRPDCRAGRFQLQ
TLALALASPKVWNRLQTSYKELQMTLDPQALLRQLFDSAIEAAHPRHVLADHLPEDRSGRAIVIGAGKAAAAMAEAIEKV
WEGELSGLVVTRYEHHADCRRIEVVEAAHPVPDDAGERVARRVLELVSNLEESDRVIFLLSGGGSSLLALPAEGISLADK
QAINKALLRSGAHIGEMNCVRKHLSAIKGGRLARACWPASVYTYAISDVPGDEATVIASGPTVADPTTSAEALAILERYH
IEVPANVRAWLEDPRSETLKPGDPMLSRSHFQLIATPQQSLDAAAQAALDAGITPLILGDLEGEAREVAKVHAGIARQVV
LHGQPIAAPCVILSGGETTVTVRGNGRGGRNAEFLLALTEALQGLPGVYALAGDTDGIDGSEDNAGALMTPDSFARAEAL
GLRAADSLADNDGYGYFAALDSLIVTGPTRTNVNDFRAILILPSSD
>Mature_525_residues
GQRPHLQGQTDRVVGHRNARAAPLKGPGQRCVRSESSRLPTTSMTCASQPDRRHQTAPFRFARHKESRPDCRAGRFQLQT
LALALASPKVWNRLQTSYKELQMTLDPQALLRQLFDSAIEAAHPRHVLADHLPEDRSGRAIVIGAGKAAAAMAEAIEKVW
EGELSGLVVTRYEHHADCRRIEVVEAAHPVPDDAGERVARRVLELVSNLEESDRVIFLLSGGGSSLLALPAEGISLADKQ
AINKALLRSGAHIGEMNCVRKHLSAIKGGRLARACWPASVYTYAISDVPGDEATVIASGPTVADPTTSAEALAILERYHI
EVPANVRAWLEDPRSETLKPGDPMLSRSHFQLIATPQQSLDAAAQAALDAGITPLILGDLEGEAREVAKVHAGIARQVVL
HGQPIAAPCVILSGGETTVTVRGNGRGGRNAEFLLALTEALQGLPGVYALAGDTDGIDGSEDNAGALMTPDSFARAEALG
LRAADSLADNDGYGYFAALDSLIVTGPTRTNVNDFRAILILPSSD

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=527, Percent_Identity=31.3092979127135, Blast_Score=171, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI193205461, Length=460, Percent_Identity=29.1304347826087, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI19920578, Length=486, Percent_Identity=28.8065843621399, Blast_Score=149, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 56113; Mature: 55982

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRPHLQGQTDRVVGHRNARAAPLKGPGQRCVRSESSRLPTTSMTCASQPDRRHQTAPF
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCH
RFARHKESRPDCRAGRFQLQTLALALASPKVWNRLQTSYKELQMTLDPQALLRQLFDSAI
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH
EAAHPRHVLADHLPEDRSGRAIVIGAGKAAAAMAEAIEKVWEGELSGLVVTRYEHHADCR
HHCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
RIEVVEAAHPVPDDAGERVARRVLELVSNLEESDRVIFLLSGGGSSLLALPAEGISLADK
HEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
QAINKALLRSGAHIGEMNCVRKHLSAIKGGRLARACWPASVYTYAISDVPGDEATVIASG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCEEEEEECCCCCCCEEEEECC
PTVADPTTSAEALAILERYHIEVPANVRAWLEDPRSETLKPGDPMLSRSHFQLIATPQQS
CCCCCCCCCHHHHHHHHHHEECCCCCHHHHHCCCHHCCCCCCCCCCCCCCEEEEECCHHH
LDAAAQAALDAGITPLILGDLEGEAREVAKVHAGIARQVVLHGQPIAAPCVILSGGETTV
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCEEE
TVRGNGRGGRNAEFLLALTEALQGLPGVYALAGDTDGIDGSEDNAGALMTPDSFARAEAL
EEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHH
GLRAADSLADNDGYGYFAALDSLIVTGPTRTNVNDFRAILILPSSD
CCHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
GQRPHLQGQTDRVVGHRNARAAPLKGPGQRCVRSESSRLPTTSMTCASQPDRRHQTAPF
CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCH
RFARHKESRPDCRAGRFQLQTLALALASPKVWNRLQTSYKELQMTLDPQALLRQLFDSAI
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHH
EAAHPRHVLADHLPEDRSGRAIVIGAGKAAAAMAEAIEKVWEGELSGLVVTRYEHHADCR
HHCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
RIEVVEAAHPVPDDAGERVARRVLELVSNLEESDRVIFLLSGGGSSLLALPAEGISLADK
HEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
QAINKALLRSGAHIGEMNCVRKHLSAIKGGRLARACWPASVYTYAISDVPGDEATVIASG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCEEEEEECCCCCCCEEEEECC
PTVADPTTSAEALAILERYHIEVPANVRAWLEDPRSETLKPGDPMLSRSHFQLIATPQQS
CCCCCCCCCHHHHHHHHHHEECCCCCHHHHHCCCHHCCCCCCCCCCCCCCEEEEECCHHH
LDAAAQAALDAGITPLILGDLEGEAREVAKVHAGIARQVVLHGQPIAAPCVILSGGETTV
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCEEE
TVRGNGRGGRNAEFLLALTEALQGLPGVYALAGDTDGIDGSEDNAGALMTPDSFARAEAL
EEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHH
GLRAADSLADNDGYGYFAALDSLIVTGPTRTNVNDFRAILILPSSD
CCHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]