| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is steT [H]
Identifier: 146283353
GI number: 146283353
Start: 3254918
End: 3256267
Strand: Direct
Name: steT [H]
Synonym: PST_3023
Alternate gene names: 146283353
Gene position: 3254918-3256267 (Clockwise)
Preceding gene: 146283352
Following gene: 146283356
Centisome position: 71.26
GC content: 68.74
Gene sequence:
>1350_bases ATGAGTAGCCAGATGCGCTCGCGGCACAGCGGCGACCTCTCGGTGATCGATGGCGTAGCCGTGCTGGTCGGCGTCGTGGT GGGCGTCGGCATCTTCGGCTTCCCGCCCCTGGTCGCCCAGCATGCCGACAGCGGGACGCTGTATATCGCCCTCTGGCTGG CCGGAGGCGCGCTGATGCTGGTCGGCGCGCTGTGCTACGCGGAGCTGGGCGCGAGCTTCCCCGACGAGGGCGGCGAGTAC CACTACCTGCGGCTGGCCTGGGGTCGCCGTTTCGGCCTGATGTTCGCATGGGCCCGCGGTACCGTGATCCAGACCGGCGC CATCGCCGCGGTGGCCTTCATCTACGGCGACTACGCGCAACGGCTGATGCCCCTGGGCGACCACGGCGGCACGCTGCACG CCCTGCTCTCAGTGGCATTGCTGACCACGCTCAACGTGTGCGGCACGCGCGAGTCCAAACGCGTCCAGATCGCCCTGAGC AGCCTAACCCTAGTCGCCGTCATCGGCGTGATGCTGGCCGGCCTGCTTTCCAGCGGCCCCAGCTCGCCGGCCGCGATCGA GCCGCGCGACGGAGGCCTCGGCATGCTGGGCATGGGCATGGTCTTCGTGCTGCTGACCTACGGAGGCTGGAACGAAACCG CCTACCTGTCGGGCGAGCTGCGCAACCCGGCGCGCAACATGGGCCGCGTACTGCTGCTCGGCACGCTGCTGGTGACCACC CTCTATTTGCTGACCAACCTGGCACTGCTGCAGATATTCGGTCTGCAGGCGCTCAGCCAGTCGGACGCGATCGGTGCCGA TCTGATGGAGATCGTCGCCGGTAGCTGGGCGGCCCAGGGGCTGAGCCTGCTGATCTGCTTTACCGCGCTCAGCACGCTCA ACGCGACGATCCTCACCGGAGCACGGGTGTATTACGCGCTGGGCCGGGACGTGCCGCGGCTGCATCGGCTCGCGGCGTGG AACGAGCGTGGCTCGACGCCCGTACGGGCATTGCTGGTACAGGCGACGATCACCCTGCTGCTGATCCTGTTCGGCGCGCT GAGCCAGAGCGGCGTGCAGGCGATGGTCGCCTACACCGCGCCGGTATTCTGGTTCTTCATGTGCATGACGGCGCTGTCGC TGCTGCGACTGCGCCGGCTGGAGGCCTCGGCGCCACGGCCATTCCGCGTGCCCTGGTACCCCTGGCTACCGCTGCTGTTC GCCAGCAGCTGCCTGGGCCTGTTCGTCTCCAGCACGCTCTACGCGGGACCGGGCGCGCTGCTGGGGCTGCTGGTCCTTGC CTTCGGCCTGCCGCTTCTACTGGTGCGCAGCCCGGCTGCAGTGAGCGCAACCTCGGGCGTCGAGCCCTAG
Upstream 100 bases:
>100_bases TGGGCGGCATGGACTACGTGGGCAAGGTGGAAGGCGACCGTATCAACCCGCTGCAAGGTGAAGGAGTCGCCTCCGGCTGG AGCGCGCGGCGTAGCTGAAC
Downstream 100 bases:
>100_bases AGCTTCAGCTCGAACTCGTCGCCGTCGTGGTACGCCGGGAAGCGCTCGCGGAACGCCGCCAGGTCGCGGGCGCGCAGGGA ACAGCGGAAAACGCCATCGC
Product: amino acid transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSSQMRSRHSGDLSVIDGVAVLVGVVVGVGIFGFPPLVAQHADSGTLYIALWLAGGALMLVGALCYAELGASFPDEGGEY HYLRLAWGRRFGLMFAWARGTVIQTGAIAAVAFIYGDYAQRLMPLGDHGGTLHALLSVALLTTLNVCGTRESKRVQIALS SLTLVAVIGVMLAGLLSSGPSSPAAIEPRDGGLGMLGMGMVFVLLTYGGWNETAYLSGELRNPARNMGRVLLLGTLLVTT LYLLTNLALLQIFGLQALSQSDAIGADLMEIVAGSWAAQGLSLLICFTALSTLNATILTGARVYYALGRDVPRLHRLAAW NERGSTPVRALLVQATITLLLILFGALSQSGVQAMVAYTAPVFWFFMCMTALSLLRLRRLEASAPRPFRVPWYPWLPLLF ASSCLGLFVSSTLYAGPGALLGLLVLAFGLPLLLVRSPAAVSATSGVEP
Sequences:
>Translated_449_residues MSSQMRSRHSGDLSVIDGVAVLVGVVVGVGIFGFPPLVAQHADSGTLYIALWLAGGALMLVGALCYAELGASFPDEGGEY HYLRLAWGRRFGLMFAWARGTVIQTGAIAAVAFIYGDYAQRLMPLGDHGGTLHALLSVALLTTLNVCGTRESKRVQIALS SLTLVAVIGVMLAGLLSSGPSSPAAIEPRDGGLGMLGMGMVFVLLTYGGWNETAYLSGELRNPARNMGRVLLLGTLLVTT LYLLTNLALLQIFGLQALSQSDAIGADLMEIVAGSWAAQGLSLLICFTALSTLNATILTGARVYYALGRDVPRLHRLAAW NERGSTPVRALLVQATITLLLILFGALSQSGVQAMVAYTAPVFWFFMCMTALSLLRLRRLEASAPRPFRVPWYPWLPLLF ASSCLGLFVSSTLYAGPGALLGLLVLAFGLPLLLVRSPAAVSATSGVEP >Mature_448_residues SSQMRSRHSGDLSVIDGVAVLVGVVVGVGIFGFPPLVAQHADSGTLYIALWLAGGALMLVGALCYAELGASFPDEGGEYH YLRLAWGRRFGLMFAWARGTVIQTGAIAAVAFIYGDYAQRLMPLGDHGGTLHALLSVALLTTLNVCGTRESKRVQIALSS LTLVAVIGVMLAGLLSSGPSSPAAIEPRDGGLGMLGMGMVFVLLTYGGWNETAYLSGELRNPARNMGRVLLLGTLLVTTL YLLTNLALLQIFGLQALSQSDAIGADLMEIVAGSWAAQGLSLLICFTALSTLNATILTGARVYYALGRDVPRLHRLAAWN ERGSTPVRALLVQATITLLLILFGALSQSGVQAMVAYTAPVFWFFMCMTALSLLRLRRLEASAPRPFRVPWYPWLPLLFA SSCLGLFVSSTLYAGPGALLGLLVLAFGLPLLLVRSPAAVSATSGVEP
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI115648063, Length=433, Percent_Identity=27.2517321016166, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI115648022, Length=433, Percent_Identity=27.2517321016166, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI186910308, Length=446, Percent_Identity=26.0089686098655, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI186910306, Length=446, Percent_Identity=26.0089686098655, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI186910304, Length=446, Percent_Identity=26.0089686098655, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI187423910, Length=390, Percent_Identity=28.4615384615385, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI7657591, Length=390, Percent_Identity=28.4615384615385, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI33286428, Length=403, Percent_Identity=27.0471464019851, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI71979932, Length=433, Percent_Identity=27.2517321016166, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI7657683, Length=408, Percent_Identity=23.7745098039216, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI9790235, Length=324, Percent_Identity=26.2345679012346, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI33286430, Length=202, Percent_Identity=24.7524752475248, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI71999149, Length=392, Percent_Identity=23.469387755102, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87082250, Length=439, Percent_Identity=24.1457858769932, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1786694, Length=390, Percent_Identity=24.8717948717949, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790584, Length=373, Percent_Identity=25.4691689008043, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17540018, Length=436, Percent_Identity=25.6880733944954, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17568033, Length=451, Percent_Identity=24.8337028824834, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI32566699, Length=347, Percent_Identity=25.6484149855908, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71993915, Length=401, Percent_Identity=26.1845386533666, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71995382, Length=393, Percent_Identity=25.9541984732824, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71995388, Length=390, Percent_Identity=26.1538461538462, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71982608, Length=448, Percent_Identity=23.8839285714286, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI71982612, Length=448, Percent_Identity=23.8839285714286, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71990446, Length=429, Percent_Identity=22.1445221445221, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193208714, Length=425, Percent_Identity=22.8235294117647, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI32566695, Length=425, Percent_Identity=22.8235294117647, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17532491, Length=366, Percent_Identity=21.8579234972678, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321751, Length=356, Percent_Identity=21.6292134831461, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6321492, Length=431, Percent_Identity=21.5777262180974, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550968, Length=433, Percent_Identity=28.6374133949192, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI19921172, Length=433, Percent_Identity=28.6374133949192, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI21357367, Length=448, Percent_Identity=24.5535714285714, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI221331183, Length=444, Percent_Identity=26.3513513513513, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17647653, Length=444, Percent_Identity=26.3513513513513, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24664379, Length=444, Percent_Identity=26.3513513513513, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24651635, Length=441, Percent_Identity=26.0770975056689, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24651633, Length=441, Percent_Identity=26.0770975056689, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24641993, Length=398, Percent_Identity=26.3819095477387, Blast_Score=118, Evalue=9e-27, Organism=Drosophila melanogaster, GI24641995, Length=398, Percent_Identity=26.3819095477387, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 47474; Mature: 47342
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQMRSRHSGDLSVIDGVAVLVGVVVGVGIFGFPPLVAQHADSGTLYIALWLAGGALML CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHCCHHHH VGALCYAELGASFPDEGGEYHYLRLAWGRRFGLMFAWARGTVIQTGAIAAVAFIYGDYAQ HHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHEEEECCCCEEEHHHHHHHHHHHHHHHH RLMPLGDHGGTLHALLSVALLTTLNVCGTRESKRVQIALSSLTLVAVIGVMLAGLLSSGP HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC SSPAAIEPRDGGLGMLGMGMVFVLLTYGGWNETAYLSGELRNPARNMGRVLLLGTLLVTT CCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH LYLLTNLALLQIFGLQALSQSDAIGADLMEIVAGSWAAQGLSLLICFTALSTLNATILTG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVYYALGRDVPRLHRLAAWNERGSTPVRALLVQATITLLLILFGALSQSGVQAMVAYTA HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PVFWFFMCMTALSLLRLRRLEASAPRPFRVPWYPWLPLLFASSCLGLFVSSTLYAGPGAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH LGLLVLAFGLPLLLVRSPAAVSATSGVEP HHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSQMRSRHSGDLSVIDGVAVLVGVVVGVGIFGFPPLVAQHADSGTLYIALWLAGGALML CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHCCHHHH VGALCYAELGASFPDEGGEYHYLRLAWGRRFGLMFAWARGTVIQTGAIAAVAFIYGDYAQ HHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHEEEECCCCEEEHHHHHHHHHHHHHHHH RLMPLGDHGGTLHALLSVALLTTLNVCGTRESKRVQIALSSLTLVAVIGVMLAGLLSSGP HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC SSPAAIEPRDGGLGMLGMGMVFVLLTYGGWNETAYLSGELRNPARNMGRVLLLGTLLVTT CCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH LYLLTNLALLQIFGLQALSQSDAIGADLMEIVAGSWAAQGLSLLICFTALSTLNATILTG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVYYALGRDVPRLHRLAAWNERGSTPVRALLVQATITLLLILFGALSQSGVQAMVAYTA HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PVFWFFMCMTALSLLRLRRLEASAPRPFRVPWYPWLPLLFASSCLGLFVSSTLYAGPGAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH LGLLVLAFGLPLLLVRSPAAVSATSGVEP HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]