| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283284
Identifier: 146283284
GI number: 146283284
Start: 3174665
End: 3176341
Strand: Direct
Name: 146283284
Synonym: PST_2949
Alternate gene names: NA
Gene position: 3174665-3176341 (Clockwise)
Preceding gene: 146283281
Following gene: 146283285
Centisome position: 69.51
GC content: 66.07
Gene sequence:
>1677_bases TTGCTTCCTCTGCCGGAGTCACCGGCCAGGATTACTGCCATGATTCGCATCACCGAACTGTCCCTGCCCCTCGATCATCC CGCCGATGCGCTGCGCGAGGCCATCGTCAAGCGTCTGAACATCAGTGACGCCGACCTGCTGAACTTCAGCGTGTTCAAGC GCAGCTACGATGCGCGCAAGAAGAACAGCGTCATCCTGTTCATCTACATCCTCGACGTCGAGGTTCGTGACGAGGCGGCA GTCCTGGCGCGCTTTGCCGACGACAACCACGTGCGCCCGGCGCCGGATACCCGCTACTACCCGGTCGGTCAGGCTCCAGC GGATCTGACCGAGCGGCCGCTGGTGGTAGGCTTCGGCCCCTGTGGGCTGTTCGCCGCGCTGCTGCTGGCACAGATGGGCT TCAAGCCCATCGTGCTGGAGCGCGGCAAGGATGTGCGCCGCCGCACCAAGGACACCTGGGCGCTGTGGCGCAAGAAGACC CTGACGCCGGAATCCAACGTGCAATTCGGCGAAGGCGGTGCCGGTCTGTTCTCCGACGGCAAGCTCTACAGCCAGATCAA GGATCCGAAGTTCTACGCCCGCAAGGTGATGCACGAATTCGTCCGCGCCGGCGCGCCGGAAGAGATCATGTACGTCAGCA AGCCGCATATCGGCACCTTCCGCCTTACCGGCGTGGTTGCCGCGATGCGCGAGGAAATCATCGCCCTCGGCGGCGAGGTA CGCTTCGAGACCAGGGTCACCGATCTCGTGATCGACGATGGCCAGCTCGAAGGCGTGGTGCTGGCCAATGGCGAGACACT TCGCAGCCGCCATGTAGTGCTGGCCCTGGGTCACAGCTCCCGCGACACCTTCCGTATGCTGCATCGCCAGGGCGTGCATA TCGAAGCCAAGCCGTTTGCCATCGGTTTCCGCATCGAGCATCCGCAGGGCATGATCGACCAGGCCCGTCTGGGCAAGTAC GCCGGCCATCCGGAGCTGGGCGCCGCGGACTACAAACTGGTGTACCACGCCAAGAACGGCCGCGCGGTCTACAGCTTCTG CATGTGCCCGGGCGGCACCGTGGTGGCCGCCACGTCGGAGCCGGGACGCGTGGTGACCAACGGCATGAGCCAGTACTCGC GCAACGAGCGCAATGCCAACGCCGGCATCGTCGTCGGCATCAACCCAGAGCAGGATTTCCCCGGCGATGCGCTGGCCGGC GTGGAGCTGCAGGAGCGTCTGGAATCGCGCGCCTACGAGCTGGGCGGCAGCGACTACTGCGCGCCCGGGCAACTGGTGGG CGACTTCATTCGCGGCGTGCCGTCGACCGAGTTCGGCGAGGTCGAGCCGTCCTACAAACCGGGCGTGCGCCTGGGCGATC TGGCGCCCTCGCTGCCGGAATATGCCATCGAGGCGATCCGCGAAGCGCTGCCGGCCTTCGGCAAGCAGATCCGCGGGTTC GATCGCGCTGACGCGGTGCTCACCGGCATCGAGACCCGCACCTCCTCGCCGGTACGCATCACCCGCGACAGCGAAACACT GCAGAGCCTCAACCTGCGCGGCCTGTATCCGGCCGGCGAAGGCGCGGGTTACGCCGGCGGCATCCTCTCGGCGGGCGTGG ACGGCATCAAGGTCGCCGAGGCGCTGGCCAAGGCGATGCTGGCGGAAGCGGGACAGACTGACGTGCAGAGCCACTGA
Upstream 100 bases:
>100_bases CGGGCGCCGGGCGCAGCACCTGCCCCGGGGGAACCGCGTAAGCGCCGCCTGACAGGCGTGCTTGCCGCCGGTACAATCCG CGCCTCACGCCCCCCTCTCG
Downstream 100 bases:
>100_bases GCGCCGCCTTGATGAAATTCGAAGACATCAAAAAGCTGCACCAGAAAAAGTACCGGGCCGAGTTCGGGCTTTTTCTGGTG GAGGGCGAGCATCTGGTGCT
Product: uncharacterized FAD-dependent dehydrogenase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MLPLPESPARITAMIRITELSLPLDHPADALREAIVKRLNISDADLLNFSVFKRSYDARKKNSVILFIYILDVEVRDEAA VLARFADDNHVRPAPDTRYYPVGQAPADLTERPLVVGFGPCGLFAALLLAQMGFKPIVLERGKDVRRRTKDTWALWRKKT LTPESNVQFGEGGAGLFSDGKLYSQIKDPKFYARKVMHEFVRAGAPEEIMYVSKPHIGTFRLTGVVAAMREEIIALGGEV RFETRVTDLVIDDGQLEGVVLANGETLRSRHVVLALGHSSRDTFRMLHRQGVHIEAKPFAIGFRIEHPQGMIDQARLGKY AGHPELGAADYKLVYHAKNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGIVVGINPEQDFPGDALAG VELQERLESRAYELGGSDYCAPGQLVGDFIRGVPSTEFGEVEPSYKPGVRLGDLAPSLPEYAIEAIREALPAFGKQIRGF DRADAVLTGIETRTSSPVRITRDSETLQSLNLRGLYPAGEGAGYAGGILSAGVDGIKVAEALAKAMLAEAGQTDVQSH
Sequences:
>Translated_558_residues MLPLPESPARITAMIRITELSLPLDHPADALREAIVKRLNISDADLLNFSVFKRSYDARKKNSVILFIYILDVEVRDEAA VLARFADDNHVRPAPDTRYYPVGQAPADLTERPLVVGFGPCGLFAALLLAQMGFKPIVLERGKDVRRRTKDTWALWRKKT LTPESNVQFGEGGAGLFSDGKLYSQIKDPKFYARKVMHEFVRAGAPEEIMYVSKPHIGTFRLTGVVAAMREEIIALGGEV RFETRVTDLVIDDGQLEGVVLANGETLRSRHVVLALGHSSRDTFRMLHRQGVHIEAKPFAIGFRIEHPQGMIDQARLGKY AGHPELGAADYKLVYHAKNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGIVVGINPEQDFPGDALAG VELQERLESRAYELGGSDYCAPGQLVGDFIRGVPSTEFGEVEPSYKPGVRLGDLAPSLPEYAIEAIREALPAFGKQIRGF DRADAVLTGIETRTSSPVRITRDSETLQSLNLRGLYPAGEGAGYAGGILSAGVDGIKVAEALAKAMLAEAGQTDVQSH >Mature_558_residues MLPLPESPARITAMIRITELSLPLDHPADALREAIVKRLNISDADLLNFSVFKRSYDARKKNSVILFIYILDVEVRDEAA VLARFADDNHVRPAPDTRYYPVGQAPADLTERPLVVGFGPCGLFAALLLAQMGFKPIVLERGKDVRRRTKDTWALWRKKT LTPESNVQFGEGGAGLFSDGKLYSQIKDPKFYARKVMHEFVRAGAPEEIMYVSKPHIGTFRLTGVVAAMREEIIALGGEV RFETRVTDLVIDDGQLEGVVLANGETLRSRHVVLALGHSSRDTFRMLHRQGVHIEAKPFAIGFRIEHPQGMIDQARLGKY AGHPELGAADYKLVYHAKNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGIVVGINPEQDFPGDALAG VELQERLESRAYELGGSDYCAPGQLVGDFIRGVPSTEFGEVEPSYKPGVRLGDLAPSLPEYAIEAIREALPAFGKQIRGF DRADAVLTGIETRTSSPVRITRDSETLQSLNLRGLYPAGEGAGYAGGILSAGVDGIKVAEALAKAMLAEAGQTDVQSH
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 60799; Mature: 60799
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLPESPARITAMIRITELSLPLDHPADALREAIVKRLNISDADLLNFSVFKRSYDARK CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC KNSVILFIYILDVEVRDEAAVLARFADDNHVRPAPDTRYYPVGQAPADLTERPLVVGFGP CCCEEEEEEEEEEEECCCHHHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECH CGLFAALLLAQMGFKPIVLERGKDVRRRTKDTWALWRKKTLTPESNVQFGEGGAGLFSDG HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC KLYSQIKDPKFYARKVMHEFVRAGAPEEIMYVSKPHIGTFRLTGVVAAMREEIIALGGEV HHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCE RFETRVTDLVIDDGQLEGVVLANGETLRSRHVVLALGHSSRDTFRMLHRQGVHIEAKPFA EEEEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCEE IGFRIEHPQGMIDQARLGKYAGHPELGAADYKLVYHAKNGRAVYSFCMCPGGTVVAATSE EEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCC PGRVVTNGMSQYSRNERNANAGIVVGINPEQDFPGDALAGVELQERLESRAYELGGSDYC CCCHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC APGQLVGDFIRGVPSTEFGEVEPSYKPGVRLGDLAPSLPEYAIEAIREALPAFGKQIRGF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC DRADAVLTGIETRTSSPVRITRDSETLQSLNLRGLYPAGEGAGYAGGILSAGVDGIKVAE CHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHH ALAKAMLAEAGQTDVQSH HHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLPLPESPARITAMIRITELSLPLDHPADALREAIVKRLNISDADLLNFSVFKRSYDARK CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC KNSVILFIYILDVEVRDEAAVLARFADDNHVRPAPDTRYYPVGQAPADLTERPLVVGFGP CCCEEEEEEEEEEEECCCHHHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECH CGLFAALLLAQMGFKPIVLERGKDVRRRTKDTWALWRKKTLTPESNVQFGEGGAGLFSDG HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC KLYSQIKDPKFYARKVMHEFVRAGAPEEIMYVSKPHIGTFRLTGVVAAMREEIIALGGEV HHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCE RFETRVTDLVIDDGQLEGVVLANGETLRSRHVVLALGHSSRDTFRMLHRQGVHIEAKPFA EEEEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCEE IGFRIEHPQGMIDQARLGKYAGHPELGAADYKLVYHAKNGRAVYSFCMCPGGTVVAATSE EEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCC PGRVVTNGMSQYSRNERNANAGIVVGINPEQDFPGDALAGVELQERLESRAYELGGSDYC CCCHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC APGQLVGDFIRGVPSTEFGEVEPSYKPGVRLGDLAPSLPEYAIEAIREALPAFGKQIRGF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC DRADAVLTGIETRTSSPVRITRDSETLQSLNLRGLYPAGEGAGYAGGILSAGVDGIKVAE CHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHH ALAKAMLAEAGQTDVQSH HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]