| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283156
Identifier: 146283156
GI number: 146283156
Start: 3043776
End: 3044348
Strand: Direct
Name: 146283156
Synonym: PST_2821
Alternate gene names: NA
Gene position: 3043776-3044348 (Clockwise)
Preceding gene: 146283155
Following gene: 146283158
Centisome position: 66.64
GC content: 61.78
Gene sequence:
>573_bases ATGAAGCTGCGCGGTATCGTGCTCGCATTGCTGCTGCTCGGCGCGCTGCCGGCGGCGGCCAACATTCGCCAGGCTCCGGA ACCGGAACTGCGCGAGTTGATGCAGCGTACGGTCGCCGAGGCGGACAGCTTTCAGGATCGCTTCGATGCCGAGGTCTGGC TGGTAGACATGTCCGGGCGGCTCAAACGCTATGTTCCGGACGCCGAGGAGCGCCTGTCGCTGCTGAGGCTGGTCCATCGG GAGGCGAGCAAGGCCGGACTGAAGCCGGAACTGGTGCTGGCGCTGATTCATGCCGAAAGCCGCTTCGACCGCTTCGCCAT TTCCAGCGTCGGTGCGCAAGGCATGATGCAGGTGATGCCTTTCTGGAAAGCTGAACTGGGACGCCCCCAGGACAACCTCA CCGACAATGCAACCAACTTGCGCTATGGCTGCACGATCCTCAGCTACTACCTGCAGAAGGAAAAGGGCGACATCAATCGG GCGCTGGCGCGCTACAACGGCAGCCTCGGCCAAAATCGTTACCCGGCCAAGGTGATCGGTTTCTGGCAGGATTTCTGGTA CGTCAAACCCTGA
Upstream 100 bases:
>100_bases AACTGGAGCAGAGCCTGATCGAGCTGACACGCAACGATCCGGAGCTGCAGCAGCAGTTCCTGCAAAGCCTGATCGAAGGC AACGACCGGAACTGAGCACG
Downstream 100 bases:
>100_bases CCGGACTTCACTGGTCTTTCAGGCGAGCCAGATGCGCCAGTATTCCTTCGGCGGTCTGCTCACCCACCAGGCGCTGGCGG ACGGTGCCCCTATCGTCCAC
Product: transglycosylase, putative
Products: NA
Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Transglycosylase Slt Domain Protein; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Transglycosylase SLT Domain-Containing Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKLRGIVLALLLLGALPAAANIRQAPEPELRELMQRTVAEADSFQDRFDAEVWLVDMSGRLKRYVPDAEERLSLLRLVHR EASKAGLKPELVLALIHAESRFDRFAISSVGAQGMMQVMPFWKAELGRPQDNLTDNATNLRYGCTILSYYLQKEKGDINR ALARYNGSLGQNRYPAKVIGFWQDFWYVKP
Sequences:
>Translated_190_residues MKLRGIVLALLLLGALPAAANIRQAPEPELRELMQRTVAEADSFQDRFDAEVWLVDMSGRLKRYVPDAEERLSLLRLVHR EASKAGLKPELVLALIHAESRFDRFAISSVGAQGMMQVMPFWKAELGRPQDNLTDNATNLRYGCTILSYYLQKEKGDINR ALARYNGSLGQNRYPAKVIGFWQDFWYVKP >Mature_190_residues MKLRGIVLALLLLGALPAAANIRQAPEPELRELMQRTVAEADSFQDRFDAEVWLVDMSGRLKRYVPDAEERLSLLRLVHR EASKAGLKPELVLALIHAESRFDRFAISSVGAQGMMQVMPFWKAELGRPQDNLTDNATNLRYGCTILSYYLQKEKGDINR ALARYNGSLGQNRYPAKVIGFWQDFWYVKP
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21625; Mature: 21625
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRGIVLALLLLGALPAAANIRQAPEPELRELMQRTVAEADSFQDRFDAEVWLVDMSGR CCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LKRYVPDAEERLSLLRLVHREASKAGLKPELVLALIHAESRFDRFAISSVGAQGMMQVMP HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FWKAELGRPQDNLTDNATNLRYGCTILSYYLQKEKGDINRALARYNGSLGQNRYPAKVIG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH FWQDFWYVKP HHHHHEEECC >Mature Secondary Structure MKLRGIVLALLLLGALPAAANIRQAPEPELRELMQRTVAEADSFQDRFDAEVWLVDMSGR CCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LKRYVPDAEERLSLLRLVHREASKAGLKPELVLALIHAESRFDRFAISSVGAQGMMQVMP HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FWKAELGRPQDNLTDNATNLRYGCTILSYYLQKEKGDINRALARYNGSLGQNRYPAKVIG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH FWQDFWYVKP HHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA