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The map label for this gene is yfgC [C]

Identifier: 146283131

GI number: 146283131

Start: 3020307

End: 3021737

Strand: Direct

Name: yfgC [C]

Synonym: PST_2795

Alternate gene names: 146283131

Gene position: 3020307-3021737 (Clockwise)

Preceding gene: 146283128

Following gene: 146283148

Centisome position: 66.13

GC content: 64.43

Gene sequence:

>1431_bases
ATGAAACTGCTGCGCCCCGCCCTGCTCACGCTCACCTGCCTGCTTGTGCAACCGACATTGGCTAACGACCTGCCTTCGCT
CGGCGACGCCAGCTCGGGCATCGTGTCGCCGGAACAGGAACATGTGCTCGGGCGCGCCTGGCTGAGCCTGCTGCGGGGGC
AGGTGAAGCAGCTTTCCGACCCCCAGCTCAAGGACTACGTCGAGAACAGCGTGTACCGCCTGGCCGAAACCAGCCAGCTA
CAGGATCGACGTCTGGAATTCGTCCTGCTCGACAGCCCGCAGCTAAACGCCTTTGCCGCACCCGGTGGCATCATCGGGGT
CAATGGTGGCCTGTTCATTCATGCGCAGACCGAAGCCGAGTACGCTTCGGTGATGGCGCACGAACTGGCTCACCTCTCAC
AGCGACACTTCGCTCGCGGCCTCGAAGCCCAGCAGCGCATGCAGCTGCCGATGATGGCCGCCATGCTCGCTGGCGTCGTG
GCAGCCGCAGCCGGGGCCGGCGATGCGGGCATCGCCGCCATCGTTTCCACCCAGGCCGCAGCCATCCAGGCCCAGCGTCG
CTTCTCCCGGCAGAACGAGCAGGAGGCCGACCGTATCGGCATCGTCAACCTCGAACGCGCCGGTTATGACCCACGCGCCA
TGCCATCGATGTTCGGCCGGCTGATGCGGCAGTACCGCTATGACCAGAAGCCACCGGAGTTCCTTCTGACCCACCCGGTC
AGCGAATCGCGCATCGCAGACACCACAAACCGAGCCGAGCAATATGCGCAGGGCGGCACTCAGGACAGCCTGCGCTACCA
GTTGATGCGGGCGCGTACCCAACTCAAGTTCGAAAGCACACCCGGCGTCGGAGCCAAGCGTTTCCGCGCAATGCTCGATG
AGAACCCCGAGATGGACGCCGCCCGTTACGGACTGGCGCTGGCGCAGATGAAAGCCGGGCAGCTCGCCGATGCGGCCAGC
AGCCTGGAGCCGCTGCTGGCCAAGGCTCCGGATGACCTCACCTACAATCTGGCACAGGTCGAGCTCGACATAACAGCCAA
TCGCCTGCAGCAGGCGCAGACCCGACTACAGCGTCTGCTGCAGCTGTATCCGGGTAACTACCCGGTGCGCCAGATGCATA
TCGACCTGTTGATGGAGCGGGGCGAGACCCAACAAGCCGAACGCGAGCTGGACAAACTCGCCGAGCAGCGCCGGCGGGAC
CCGGACATCTGGTACCAGGTCGCAGAGGTCCGGGGCCTTAGCGGAAACATTGTCGGCCTGCATCAGGCGCGCGCCGAATA
CTTCGCGCTGGTCGGCGACTACGATCAGGGCATCGAGCAGCTCAACCTGGCCAAGCGCCGCGCCAGCAACTTCCAGATTT
CCGCGCGAATCGACGCCAGGCAGAAGCAGCTGATCGAAGAGAAGCGCATGGTCGAGGACATGCTGCGTTGA

Upstream 100 bases:

>100_bases
CTCAGCAAAGCCACGCAGCATACCTAGCGCACCGGGGCTCTGGCCAGCCAGCCAAGGTCAAGGCTACAGTAGCCGTTCTC
ACTTCAACGAGCCTGCCTGG

Downstream 100 bases:

>100_bases
TAAGCAGCACGCGACACCCCTACAGACCATACCAATGAAAAAGCCACGCTCGAAAAAGCGTGGCCTCGGTTGACGCGGTC
GAGTGCGTATCCGCCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKLLRPALLTLTCLLVQPTLANDLPSLGDASSGIVSPEQEHVLGRAWLSLLRGQVKQLSDPQLKDYVENSVYRLAETSQL
QDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAEYASVMAHELAHLSQRHFARGLEAQQRMQLPMMAAMLAGVV
AAAAGAGDAGIAAIVSTQAAAIQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPV
SESRIADTTNRAEQYAQGGTQDSLRYQLMRARTQLKFESTPGVGAKRFRAMLDENPEMDAARYGLALAQMKAGQLADAAS
SLEPLLAKAPDDLTYNLAQVELDITANRLQQAQTRLQRLLQLYPGNYPVRQMHIDLLMERGETQQAERELDKLAEQRRRD
PDIWYQVAEVRGLSGNIVGLHQARAEYFALVGDYDQGIEQLNLAKRRASNFQISARIDARQKQLIEEKRMVEDMLR

Sequences:

>Translated_476_residues
MKLLRPALLTLTCLLVQPTLANDLPSLGDASSGIVSPEQEHVLGRAWLSLLRGQVKQLSDPQLKDYVENSVYRLAETSQL
QDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAEYASVMAHELAHLSQRHFARGLEAQQRMQLPMMAAMLAGVV
AAAAGAGDAGIAAIVSTQAAAIQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPV
SESRIADTTNRAEQYAQGGTQDSLRYQLMRARTQLKFESTPGVGAKRFRAMLDENPEMDAARYGLALAQMKAGQLADAAS
SLEPLLAKAPDDLTYNLAQVELDITANRLQQAQTRLQRLLQLYPGNYPVRQMHIDLLMERGETQQAERELDKLAEQRRRD
PDIWYQVAEVRGLSGNIVGLHQARAEYFALVGDYDQGIEQLNLAKRRASNFQISARIDARQKQLIEEKRMVEDMLR
>Mature_476_residues
MKLLRPALLTLTCLLVQPTLANDLPSLGDASSGIVSPEQEHVLGRAWLSLLRGQVKQLSDPQLKDYVENSVYRLAETSQL
QDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAEYASVMAHELAHLSQRHFARGLEAQQRMQLPMMAAMLAGVV
AAAAGAGDAGIAAIVSTQAAAIQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPV
SESRIADTTNRAEQYAQGGTQDSLRYQLMRARTQLKFESTPGVGAKRFRAMLDENPEMDAARYGLALAQMKAGQLADAAS
SLEPLLAKAPDDLTYNLAQVELDITANRLQQAQTRLQRLLQLYPGNYPVRQMHIDLLMERGETQQAERELDKLAEQRRRD
PDIWYQVAEVRGLSGNIVGLHQARAEYFALVGDYDQGIEQLNLAKRRASNFQISARIDARQKQLIEEKRMVEDMLR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=423, Percent_Identity=35.2245862884161, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53174; Mature: 53174

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRPALLTLTCLLVQPTLANDLPSLGDASSGIVSPEQEHVLGRAWLSLLRGQVKQLSD
CCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLKDYVENSVYRLAETSQLQDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAE
CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCEEEECCCEEEEEECHHH
YASVMAHELAHLSQRHFARGLEAQQRMQLPMMAAMLAGVVAAAAGAGDAGIAAIVSTQAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AIQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPV
HHHHHHHHHHCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC
SESRIADTTNRAEQYAQGGTQDSLRYQLMRARTQLKFESTPGVGAKRFRAMLDENPEMDA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCHH
ARYGLALAQMKAGQLADAASSLEPLLAKAPDDLTYNLAQVELDITANRLQQAQTRLQRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHH
QLYPGNYPVRQMHIDLLMERGETQQAERELDKLAEQRRRDPDIWYQVAEVRGLSGNIVGL
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEH
HQARAEYFALVGDYDQGIEQLNLAKRRASNFQISARIDARQKQLIEEKRMVEDMLR
HHHHHHHHHEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLLRPALLTLTCLLVQPTLANDLPSLGDASSGIVSPEQEHVLGRAWLSLLRGQVKQLSD
CCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLKDYVENSVYRLAETSQLQDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAE
CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCEEEECCCEEEEEECHHH
YASVMAHELAHLSQRHFARGLEAQQRMQLPMMAAMLAGVVAAAAGAGDAGIAAIVSTQAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AIQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPV
HHHHHHHHHHCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC
SESRIADTTNRAEQYAQGGTQDSLRYQLMRARTQLKFESTPGVGAKRFRAMLDENPEMDA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCHH
ARYGLALAQMKAGQLADAASSLEPLLAKAPDDLTYNLAQVELDITANRLQQAQTRLQRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHH
QLYPGNYPVRQMHIDLLMERGETQQAERELDKLAEQRRRDPDIWYQVAEVRGLSGNIVGL
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEH
HQARAEYFALVGDYDQGIEQLNLAKRRASNFQISARIDARQKQLIEEKRMVEDMLR
HHHHHHHHHEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]