Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is ybgL [C]

Identifier: 146283100

GI number: 146283100

Start: 2987616

End: 2988290

Strand: Direct

Name: ybgL [C]

Synonym: PST_2761

Alternate gene names: 146283100

Gene position: 2987616-2988290 (Clockwise)

Preceding gene: 146283087

Following gene: 146283101

Centisome position: 65.41

GC content: 67.26

Gene sequence:

>675_bases
ATGCCGTTTATCGACTGCGCCAATATCGCCTGTGGCTTCCATGCCTCCGATCCGCAGATCATGCGGCGCACCGTCGCGCT
GGCGCGCCAGCACGACGTGCGCATCGGCGCGCACCCGGCCTATCCGGACCTGGTCGGCTTCGGTCGGCGCTCCATGGCCT
GCAGCCCGGCCGAAGTGGAGAACATGCTGCTCTATCAGATCGGTGCGCTCGACGGCATCTGCCGCGCCGAAGGCACGCAG
GTCCGCTACGTCAAACCCCACGGCGCGCTCTACAACGACATGATGCGCCAGCCACAGCTGCTGCGCGCGGTCATGACCGC
CGTTAAGGCCTACAGTGCCAGCCTGCCGCTGATGCTCATGTCTACCCGCGACAACAGCGAAAGCCAGGCGATGGCGGCGG
AAATCGGCATCACCCTGTGGTTCGAGGTGTTCGCCGACCGCGCCTACGACGCCGCCGGCATGCTGGTCTCGCGCAACCTG
CCGGGTGCCGTGCACCACGATGCCGAAACGGTGGCCGACCAGGCCCTGCGCCTGGCCAAGGGGGAAGCATTGACCGCCAG
CGATGGCAGCGCGCTGATCCTGCAGGCCGATACGCTCTGCGTGCACGGCGACAACGCCGGCTCGATCGCCGCTGTGCAGC
GCATTCGTCAGGCACTGCAGGCGCTTCCCGCATGA

Upstream 100 bases:

>100_bases
GCCCATCTCGAAAGGAGCAGCCATCGTGAGTCGTCTGTTACTCAATTGCGACATAGGGGAAAGCTTCGGCGCCTGGACCA
TGGGCCTGGACGCCGAGGTG

Downstream 100 bases:

>100_bases
CGCCGCGGATCGAGGTGGTCGGCATCGATAGCCTGGTGCTGCGCCTGTTCGATCAGATCGACGAGGACAATATGTCGTGG
ATGCTGGCCGCCACTCAGCG

Product: putative lactam utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPFIDCANIACGFHASDPQIMRRTVALARQHDVRIGAHPAYPDLVGFGRRSMACSPAEVENMLLYQIGALDGICRAEGTQ
VRYVKPHGALYNDMMRQPQLLRAVMTAVKAYSASLPLMLMSTRDNSESQAMAAEIGITLWFEVFADRAYDAAGMLVSRNL
PGAVHHDAETVADQALRLAKGEALTASDGSALILQADTLCVHGDNAGSIAAVQRIRQALQALPA

Sequences:

>Translated_224_residues
MPFIDCANIACGFHASDPQIMRRTVALARQHDVRIGAHPAYPDLVGFGRRSMACSPAEVENMLLYQIGALDGICRAEGTQ
VRYVKPHGALYNDMMRQPQLLRAVMTAVKAYSASLPLMLMSTRDNSESQAMAAEIGITLWFEVFADRAYDAAGMLVSRNL
PGAVHHDAETVADQALRLAKGEALTASDGSALILQADTLCVHGDNAGSIAAVQRIRQALQALPA
>Mature_223_residues
PFIDCANIACGFHASDPQIMRRTVALARQHDVRIGAHPAYPDLVGFGRRSMACSPAEVENMLLYQIGALDGICRAEGTQV
RYVKPHGALYNDMMRQPQLLRAVMTAVKAYSASLPLMLMSTRDNSESQAMAAEIGITLWFEVFADRAYDAAGMLVSRNLP
GAVHHDAETVADQALRLAKGEALTASDGSALILQADTLCVHGDNAGSIAAVQRIRQALQALPA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=219, Percent_Identity=40.6392694063927, Blast_Score=153, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 24092; Mature: 23961

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIDCANIACGFHASDPQIMRRTVALARQHDVRIGAHPAYPDLVGFGRRSMACSPAEVE
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCCCCHHHHH
NMLLYQIGALDGICRAEGTQVRYVKPHGALYNDMMRQPQLLRAVMTAVKAYSASLPLMLM
HHHHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEE
STRDNSESQAMAAEIGITLWFEVFADRAYDAAGMLVSRNLPGAVHHDAETVADQALRLAK
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCCCHHCCHHHHHHHHHHHHC
GEALTASDGSALILQADTLCVHGDNAGSIAAVQRIRQALQALPA
CCEEECCCCCEEEEEECEEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFIDCANIACGFHASDPQIMRRTVALARQHDVRIGAHPAYPDLVGFGRRSMACSPAEVE
CCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCCCCHHHHH
NMLLYQIGALDGICRAEGTQVRYVKPHGALYNDMMRQPQLLRAVMTAVKAYSASLPLMLM
HHHHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEE
STRDNSESQAMAAEIGITLWFEVFADRAYDAAGMLVSRNLPGAVHHDAETVADQALRLAK
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCCCHHCCHHHHHHHHHHHHC
GEALTASDGSALILQADTLCVHGDNAGSIAAVQRIRQALQALPA
CCEEECCCCCEEEEEECEEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA