| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is plsB [H]
Identifier: 146283042
GI number: 146283042
Start: 2925546
End: 2928104
Strand: Direct
Name: plsB [H]
Synonym: PST_2703
Alternate gene names: 146283042
Gene position: 2925546-2928104 (Clockwise)
Preceding gene: 146283041
Following gene: 146283044
Centisome position: 64.05
GC content: 65.42
Gene sequence:
>2559_bases TTGGGGCACACTTGCCGCCTTCGAGGGCTCCGCCCCTTCCACAGTCGAATCCGCCGTATGACCCGCTCCCCCGTTCGCCG TCTGATCTTCTCCCTGGTGCGCCGTGTGCTGTACACCTGGGTGCGCTCGGAGACCATCAACCAGTCCGCCTTCACCCTCA AGCTGGATCGCAGCAAGCCGGTGTTCTATGTGCTGCAGCAACCCTCGCTGAGCGATCTCGCCGTGCTCGATGCCGAGTGC AGCAAGGCCGGGCTGCCACGCCCGGTGGCCGATGTGGCGGTGGGCGAACTGGTGGAGCCGGCCGCCTTCTTCTTCCTCAA TCCGGCACCCAGCTGGTTCGGCCGGCGTACCCGCCTGGTCGCGCCACCGGCGCTGGTGCGGCTGGTCGGCGCGCTGGAGC ACAACGCGGTAGAGAACGCGCAGATCGTTCCGGTCAGCGTGTTCTGGGGGCAGTCGCCGAATCGCGAGACCAGCGCCTGG AAGCTGCTGTTCGCCGACAGCTGGGCGGTCACCGGGCGCCTGCGCAAGCTGCTCAGCATCCTGGTGCTGGGGCGCAAGAC GCGCGTGCAGTTCTCCGCGCCGATCCAGCTCAACGAACTCATCGCCCAGAACAAGGGGCACGAGCGCACACTGCGCATGG TCCATCGCATGCTGCGGGTGCACTTCCGCAACCAGAAGACCGCGGTGATCGGCCCGGACCTGTCGCACCGGCGCAATCTG GTGAAGGGCCTGGTGCACGCACCACAGGTCCGCCAGGCGATTCGCGAGGAAGCCGAACGCGAGAAGATCACCATCGAGAA GGCCGAGGCCAAGGCGCTGCGCTATGGCAACGAGATCGCCTCGGACTACGCGTATACGGCGGTGCGCTTTCTCGAGGTTG TGCTGTCCTGGTTCTGGAACAAGATCTACGACGGCATCCGCGTCAACCATATCGAGCCCTTGCAGGACGCCGTCCGCGGC TACGAAGTGATCTACGTGCCCTGCCACCGTAGCCACATCGATTACCTGCTGCTCTCCTACCTGCTGTTTCGCAACGGCCT TACCCCGCCGCACATCGCCGCCGGCATCAACCTCAACATGCCGGTGATCGGCAGCCTGCTGCGCCGCGGCGGCGCCTTCT TCATGCGCCGCTCGTTCAAGGGCAACCCGCTGTACACCTCGGTGTTCAACGAATACCTGCACAACCTGTTCACCCGCGGC TTCCCCGTCGAGTACTTCGTGGAAGGCGGGCGTTCGCGTACCGGCCGCATGCTGCAACCCAAGACCGGCATGCTGGCGCT GACCCTGCGCAGCTACCTGCGCTCGTCGCGCCTGCCGATCCTCTTCGTGCCGGTCTACATCGGCTACGAGCGGGTGCTGG AGGGCCGCACCTACCTCGGCGAATTGCGCGGCGCGGCGAAGAAGAAGGAGTCGATCTTCGACATCTTCAAGGTCATCGGC GCCCTCAAGCAGCGCTTTGGGCAGGTCTGGGTAAACTTCGGCGAGCCGCTCAAGCTCAACGAATTCCTCGAGCAGGAGCA ACCCGGCTGGCGCCAGCAGGCCTATGCGCCGGACTATCGCCCGCAGTGGCTGAACGACGCCACCAACCACCTGGCCGAGC GCATCGCCCAGCGCCTCAACGAGGCGGCGGCCGTCAACCCGGTCAACCTGGTGGCGCTGGCGATGCTCTCCACCAGCCGT CAGGCGCTGGACCAGCAATCCCTGGCACGCATCCTCGATCTCTACCAGGCGCTGTTGCGCGCAGTGCCCTATTCGCCGCA CACCACGCTGCCGGAGGGAGACGGCAACGCACTGATCGCCTACGTGAAGAGCCTCGACCTGCTCGCCGAGCAGAAGGACG CACTGGGCAACATCCTCTATCTGGACGAGCAGAATGCCGTCCTGATGACCTACTACCGCAACAACGTGATGCATATCTTC GCCCTGCCCGCACTGCTGGCGAGCTTCTTCCAGAGCAGCTCACGCATCAGCCGCGAGCAGATCCAGCGTTTCACCGAGGC GCTGTACCCCTATCTGCGTGCCGAGCTGTTCATGCGCTGGGAGGTCGAGGAGCTGGAAGCGGTGGTCGATCAGTGGCTGG CGGCCTTCGTCGAGCACGGCCTGCTCAAGGTGGACGGCAACCACTACGTGCGCCCGGCGCCAAGTTCGCGGCAGTTCGTT CTGCTCACCCTGCTGGCGCGGGTGGTGATGCAGACCCTGCAGCGCTTCTACATGGCCACCTCGCTGCTGCTCAACAGCGG CCAGCACAGCCTGAGCGCCGAGGAGCTGGAGAATCTCTGCACGGTCATGGCCCAACGCCTGTCGATACTCCACGGGCTCA ACGCGCCCGAGTTCTTCGACAAGACGCTGTTCCGCCACTTCATTCAGAGCATGCAGGAACAGGGCGTGGTCAGCACGGAT GCCAACGGTCGCCTGGGCTACCACGAAAAGCTCGCGGAGCTGGCCGAGGGTGCCGCCAAGCGCGTGCTGCCGGCGGAGAT TCGGCTGTCGATCCGGCAGGTCGCACTGGAGCGCCATCATGACGACAGCGAGGCGCCGCCGCCGCCGACCGACGCCTGA
Upstream 100 bases:
>100_bases CACGGGCGTTGACCGATTTCGCTCGAGTTCTGCCGGCAGCCATACACCGGTGTGGATCAGGCACTGACAGAGCAGCGCAG GTTTTGCCCGGCCACCTCGC
Downstream 100 bases:
>100_bases CGCTGCCAGGTCATCAGGCGTTCCGGGTGGCCGGTGTGTGCGTCCAGTTGCTCGCCTGCGACTCGGAAGCCGTGACGACG ATAGAAGGCGATACTGGCGC
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 852; Mature: 851
Protein sequence:
>852_residues MGHTCRLRGLRPFHSRIRRMTRSPVRRLIFSLVRRVLYTWVRSETINQSAFTLKLDRSKPVFYVLQQPSLSDLAVLDAEC SKAGLPRPVADVAVGELVEPAAFFFLNPAPSWFGRRTRLVAPPALVRLVGALEHNAVENAQIVPVSVFWGQSPNRETSAW KLLFADSWAVTGRLRKLLSILVLGRKTRVQFSAPIQLNELIAQNKGHERTLRMVHRMLRVHFRNQKTAVIGPDLSHRRNL VKGLVHAPQVRQAIREEAEREKITIEKAEAKALRYGNEIASDYAYTAVRFLEVVLSWFWNKIYDGIRVNHIEPLQDAVRG YEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRSFKGNPLYTSVFNEYLHNLFTRG FPVEYFVEGGRSRTGRMLQPKTGMLALTLRSYLRSSRLPILFVPVYIGYERVLEGRTYLGELRGAAKKKESIFDIFKVIG ALKQRFGQVWVNFGEPLKLNEFLEQEQPGWRQQAYAPDYRPQWLNDATNHLAERIAQRLNEAAAVNPVNLVALAMLSTSR QALDQQSLARILDLYQALLRAVPYSPHTTLPEGDGNALIAYVKSLDLLAEQKDALGNILYLDEQNAVLMTYYRNNVMHIF ALPALLASFFQSSSRISREQIQRFTEALYPYLRAELFMRWEVEELEAVVDQWLAAFVEHGLLKVDGNHYVRPAPSSRQFV LLTLLARVVMQTLQRFYMATSLLLNSGQHSLSAEELENLCTVMAQRLSILHGLNAPEFFDKTLFRHFIQSMQEQGVVSTD ANGRLGYHEKLAELAEGAAKRVLPAEIRLSIRQVALERHHDDSEAPPPPTDA
Sequences:
>Translated_852_residues MGHTCRLRGLRPFHSRIRRMTRSPVRRLIFSLVRRVLYTWVRSETINQSAFTLKLDRSKPVFYVLQQPSLSDLAVLDAEC SKAGLPRPVADVAVGELVEPAAFFFLNPAPSWFGRRTRLVAPPALVRLVGALEHNAVENAQIVPVSVFWGQSPNRETSAW KLLFADSWAVTGRLRKLLSILVLGRKTRVQFSAPIQLNELIAQNKGHERTLRMVHRMLRVHFRNQKTAVIGPDLSHRRNL VKGLVHAPQVRQAIREEAEREKITIEKAEAKALRYGNEIASDYAYTAVRFLEVVLSWFWNKIYDGIRVNHIEPLQDAVRG YEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRSFKGNPLYTSVFNEYLHNLFTRG FPVEYFVEGGRSRTGRMLQPKTGMLALTLRSYLRSSRLPILFVPVYIGYERVLEGRTYLGELRGAAKKKESIFDIFKVIG ALKQRFGQVWVNFGEPLKLNEFLEQEQPGWRQQAYAPDYRPQWLNDATNHLAERIAQRLNEAAAVNPVNLVALAMLSTSR QALDQQSLARILDLYQALLRAVPYSPHTTLPEGDGNALIAYVKSLDLLAEQKDALGNILYLDEQNAVLMTYYRNNVMHIF ALPALLASFFQSSSRISREQIQRFTEALYPYLRAELFMRWEVEELEAVVDQWLAAFVEHGLLKVDGNHYVRPAPSSRQFV LLTLLARVVMQTLQRFYMATSLLLNSGQHSLSAEELENLCTVMAQRLSILHGLNAPEFFDKTLFRHFIQSMQEQGVVSTD ANGRLGYHEKLAELAEGAAKRVLPAEIRLSIRQVALERHHDDSEAPPPPTDA >Mature_851_residues GHTCRLRGLRPFHSRIRRMTRSPVRRLIFSLVRRVLYTWVRSETINQSAFTLKLDRSKPVFYVLQQPSLSDLAVLDAECS KAGLPRPVADVAVGELVEPAAFFFLNPAPSWFGRRTRLVAPPALVRLVGALEHNAVENAQIVPVSVFWGQSPNRETSAWK LLFADSWAVTGRLRKLLSILVLGRKTRVQFSAPIQLNELIAQNKGHERTLRMVHRMLRVHFRNQKTAVIGPDLSHRRNLV KGLVHAPQVRQAIREEAEREKITIEKAEAKALRYGNEIASDYAYTAVRFLEVVLSWFWNKIYDGIRVNHIEPLQDAVRGY EVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRSFKGNPLYTSVFNEYLHNLFTRGF PVEYFVEGGRSRTGRMLQPKTGMLALTLRSYLRSSRLPILFVPVYIGYERVLEGRTYLGELRGAAKKKESIFDIFKVIGA LKQRFGQVWVNFGEPLKLNEFLEQEQPGWRQQAYAPDYRPQWLNDATNHLAERIAQRLNEAAAVNPVNLVALAMLSTSRQ ALDQQSLARILDLYQALLRAVPYSPHTTLPEGDGNALIAYVKSLDLLAEQKDALGNILYLDEQNAVLMTYYRNNVMHIFA LPALLASFFQSSSRISREQIQRFTEALYPYLRAELFMRWEVEELEAVVDQWLAAFVEHGLLKVDGNHYVRPAPSSRQFVL LTLLARVVMQTLQRFYMATSLLLNSGQHSLSAEELENLCTVMAQRLSILHGLNAPEFFDKTLFRHFIQSMQEQGVVSTDA NGRLGYHEKLAELAEGAAKRVLPAEIRLSIRQVALERHHDDSEAPPPPTDA
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=411, Percent_Identity=31.3868613138686, Blast_Score=190, Evalue=5e-48, Organism=Homo sapiens, GI190358539, Length=560, Percent_Identity=25.1785714285714, Blast_Score=159, Evalue=1e-38, Organism=Escherichia coli, GI87082362, Length=811, Percent_Identity=38.7176325524044, Blast_Score=541, Evalue=1e-155, Organism=Caenorhabditis elegans, GI25147672, Length=343, Percent_Identity=33.2361516034985, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71988723, Length=657, Percent_Identity=23.5920852359209, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71988728, Length=563, Percent_Identity=24.3339253996448, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI17864692, Length=324, Percent_Identity=31.1728395061728, Blast_Score=172, Evalue=1e-42, Organism=Drosophila melanogaster, GI21357731, Length=448, Percent_Identity=29.4642857142857, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24650754, Length=445, Percent_Identity=29.2134831460674, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24650752, Length=441, Percent_Identity=29.2517006802721, Blast_Score=157, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 97130; Mature: 96998
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHTCRLRGLRPFHSRIRRMTRSPVRRLIFSLVRRVLYTWVRSETINQSAFTLKLDRSKP CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC VFYVLQQPSLSDLAVLDAECSKAGLPRPVADVAVGELVEPAAFFFLNPAPSWFGRRTRLV EEEEECCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHEEECCCCHHHCCCCEEC APPALVRLVGALEHNAVENAQIVPVSVFWGQSPNRETSAWKLLFADSWAVTGRLRKLLSI CCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH LVLGRKTRVQFSAPIQLNELIAQNKGHERTLRMVHRMLRVHFRNQKTAVIGPDLSHRRNL HHHCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH VKGLVHAPQVRQAIREEAEREKITIEKAEAKALRYGNEIASDYAYTAVRFLEVVLSWFWN HHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH KIYDGIRVNHIEPLQDAVRGYEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNM HHHCCCEECCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCH PVIGSLLRRGGAFFMRRSFKGNPLYTSVFNEYLHNLFTRGFPVEYFVEGGRSRTGRMLQP HHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC KTGMLALTLRSYLRSSRLPILFVPVYIGYERVLEGRTYLGELRGAAKKKESIFDIFKVIG CCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKQRFGQVWVNFGEPLKLNEFLEQEQPGWRQQAYAPDYRPQWLNDATNHLAERIAQRLN HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EAAAVNPVNLVALAMLSTSRQALDQQSLARILDLYQALLRAVPYSPHTTLPEGDGNALIA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH YVKSLDLLAEQKDALGNILYLDEQNAVLMTYYRNNVMHIFALPALLASFFQSSSRISREQ HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHH IQRFTEALYPYLRAELFMRWEVEELEAVVDQWLAAFVEHGLLKVDGNHYVRPAPSSRQFV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCHH LLTLLARVVMQTLQRFYMATSLLLNSGQHSLSAEELENLCTVMAQRLSILHGLNAPEFFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH KTLFRHFIQSMQEQGVVSTDANGRLGYHEKLAELAEGAAKRVLPAEIRLSIRQVALERHH HHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DDSEAPPPPTDA CCCCCCCCCCCC >Mature Secondary Structure GHTCRLRGLRPFHSRIRRMTRSPVRRLIFSLVRRVLYTWVRSETINQSAFTLKLDRSKP CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC VFYVLQQPSLSDLAVLDAECSKAGLPRPVADVAVGELVEPAAFFFLNPAPSWFGRRTRLV EEEEECCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHEEECCCCHHHCCCCEEC APPALVRLVGALEHNAVENAQIVPVSVFWGQSPNRETSAWKLLFADSWAVTGRLRKLLSI CCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH LVLGRKTRVQFSAPIQLNELIAQNKGHERTLRMVHRMLRVHFRNQKTAVIGPDLSHRRNL HHHCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH VKGLVHAPQVRQAIREEAEREKITIEKAEAKALRYGNEIASDYAYTAVRFLEVVLSWFWN HHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH KIYDGIRVNHIEPLQDAVRGYEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNM HHHCCCEECCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCH PVIGSLLRRGGAFFMRRSFKGNPLYTSVFNEYLHNLFTRGFPVEYFVEGGRSRTGRMLQP HHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC KTGMLALTLRSYLRSSRLPILFVPVYIGYERVLEGRTYLGELRGAAKKKESIFDIFKVIG CCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKQRFGQVWVNFGEPLKLNEFLEQEQPGWRQQAYAPDYRPQWLNDATNHLAERIAQRLN HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EAAAVNPVNLVALAMLSTSRQALDQQSLARILDLYQALLRAVPYSPHTTLPEGDGNALIA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH YVKSLDLLAEQKDALGNILYLDEQNAVLMTYYRNNVMHIFALPALLASFFQSSSRISREQ HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHH IQRFTEALYPYLRAELFMRWEVEELEAVVDQWLAAFVEHGLLKVDGNHYVRPAPSSRQFV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCHH LLTLLARVVMQTLQRFYMATSLLLNSGQHSLSAEELENLCTVMAQRLSILHGLNAPEFFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH KTLFRHFIQSMQEQGVVSTDANGRLGYHEKLAELAEGAAKRVLPAEIRLSIRQVALERHH HHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DDSEAPPPPTDA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA