| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yicG [C]
Identifier: 146283012
GI number: 146283012
Start: 2898202
End: 2898765
Strand: Direct
Name: yicG [C]
Synonym: PST_2673
Alternate gene names: 146283012
Gene position: 2898202-2898765 (Clockwise)
Preceding gene: 146283005
Following gene: 146283013
Centisome position: 63.45
GC content: 66.31
Gene sequence:
>564_bases ATGGGCATGCGCCGCGGCATGGACCTGTTCGGCATCTGCCTGCTCGGCACGGTGACGGCACTGGGTGGCGGGACGGCGCG CGACGTACTGCTCGGCCACTACCCGGTCGGCTGGATCGCCCACCCGGAGTACCTCACCTTCACCATCGGCGCGGCGATCG TCACCGGCTTCATCGCGCGCCACCTGCATCACCTGCGCATGGTCTTCCTGCTGGTGGACGGTCTGGGCCTGGTGGCATTC ACCGTGATCGGCTGCGATGTCGCCATGGGCATGGGCGCGCATCCGTCCATCGTGGTACTGGCCGGCGTGATCACCGGCAT CTTCGGCGGCCTGATGCGCGACGTGCTCTGCAACCAGGTGCCGATGGTGCTGCAACGCGAGCTGTATGCCACCGTGGCGC TGTTCACCGGGGTGTTCTATGTCGGCATGCTCTGGCTGGAGATCAACACCACCCTGGCCACCCTCGCCGCGCTGGGCAGT GGCTTCCTGTTCCGCGTGCTGGCGATGACTTTCAGCTGGAAGCTGCCGGACTTCAACGGCAAGGACATCCGCGGCCTGGA ATGA
Upstream 100 bases:
>100_bases GCCCCAACCGCGGGCAGCGTAGCCTCGGAGAGTCGTCGTGGAACTGCTGCACACCATCTACCTGATCGCCATCACGGCTG AAGCCATGTCCGGAGCCATC
Downstream 100 bases:
>100_bases TCGAAGGTGCGGCGACCGGGCTTGATCGCACCAGCAGATTCGCCACGTCCGAGCCGCTACAATAGCGCGCTCGCAATCCC GGATCGGTGAATGGATGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIARHLHHLRMVFLLVDGLGLVAF TVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQVPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGS GFLFRVLAMTFSWKLPDFNGKDIRGLE
Sequences:
>Translated_187_residues MGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIARHLHHLRMVFLLVDGLGLVAF TVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQVPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGS GFLFRVLAMTFSWKLPDFNGKDIRGLE >Mature_186_residues GMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIARHLHHLRMVFLLVDGLGLVAFT VIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQVPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGSG FLFRVLAMTFSWKLPDFNGKDIRGLE
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=175, Percent_Identity=45.7142857142857, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI1786352, Length=181, Percent_Identity=35.9116022099448, Blast_Score=90, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 20102; Mature: 19971
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIAR CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH HLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGSGFLFRVLAMTFSWKLPDFNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC KDIRGLE CCCCCCC >Mature Secondary Structure GMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIAR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH HLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCNQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGSGFLFRVLAMTFSWKLPDFNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC KDIRGLE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]