| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is sspA [C]
Identifier: 146282872
GI number: 146282872
Start: 2761371
End: 2762048
Strand: Direct
Name: sspA [C]
Synonym: PST_2533
Alternate gene names: 146282872
Gene position: 2761371-2762048 (Clockwise)
Preceding gene: 146282871
Following gene: 146282876
Centisome position: 60.46
GC content: 63.57
Gene sequence:
>678_bases ATGTCTGTGACCCTGTACGGCGTGCCCCTCTCCCCCTTCGTCCGCAAGGTACGGCTGTGCCTGCAGGAAAAGGGACTCGA CTATCAGCTTGAAACGGTGATGCCCTTCACCCCGCCAGACTGGTACTACGCCATCAACCCGCTGGGACGTATTCCCGCGC TCAAGGATGGTGACTGCACCCTCGCCGACTCCAGCGTGATCTGCCAGTACCTCGAAGAAGCCTATCCCGCCACGCCGCCC CTGTACGGCGACAGCGCCCAGGCGCGCGGCCAAGTGCGCTGGCTCGAGAAATACGCGGACTACGAGCTGGCACCGTTGAC CACCTTCACCGTGTTTCGCAACCGAATTCTCAAGCCGACCTCCGGCCAGCCGTGCAACGAAGAGGCGGTGCAGACAGCGA TGCAGCAGAAGCTGCCGCCTCATTTCGACTACCTCGAGCAGCAGCTCGGCGACAACGCTTTCTTCGTCTGCGACCGGTTA TCCATGGCGGACATCGCCGTGACCTGTCAGCTGATCAACATGAGCCACGGCGGCGAACAGCTCGATGCCCAGCGCTGGCC GGGGCTGGCTGCACACCATGCGCGCATGCTGGCGCGCTCCGCCATCGAAAGCCTGCTGCCGGGCGAGCAACGCATGAATG CCAAGCTGCAGGAGATGGGCAAGGCCGCGACGGTCTAG
Upstream 100 bases:
>100_bases GGCATTCGACGACGACGACCTCTGGAAGAAGAACAACGTCTACTGATCGCATCACCGGCGACAGCTCATAACAAGAACGA ATCCACCGCGGAGGACGATG
Downstream 100 bases:
>100_bases GGTCGGCCGGCATCGGGCCCGCCGCAACAGCTGCGGCGGGCTCGACAAGCTACCAACGTCAGTTAGCGCCGCGCGTCGAG CAAACGTGCGCCCACCCACT
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; Glutathione S-Transferase-Like; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione-S-Transferase Protein; Transferase; Unkown Function; Glutathione S- Transferase N-Terminal
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSVTLYGVPLSPFVRKVRLCLQEKGLDYQLETVMPFTPPDWYYAINPLGRIPALKDGDCTLADSSVICQYLEEAYPATPP LYGDSAQARGQVRWLEKYADYELAPLTTFTVFRNRILKPTSGQPCNEEAVQTAMQQKLPPHFDYLEQQLGDNAFFVCDRL SMADIAVTCQLINMSHGGEQLDAQRWPGLAAHHARMLARSAIESLLPGEQRMNAKLQEMGKAATV
Sequences:
>Translated_225_residues MSVTLYGVPLSPFVRKVRLCLQEKGLDYQLETVMPFTPPDWYYAINPLGRIPALKDGDCTLADSSVICQYLEEAYPATPP LYGDSAQARGQVRWLEKYADYELAPLTTFTVFRNRILKPTSGQPCNEEAVQTAMQQKLPPHFDYLEQQLGDNAFFVCDRL SMADIAVTCQLINMSHGGEQLDAQRWPGLAAHHARMLARSAIESLLPGEQRMNAKLQEMGKAATV >Mature_224_residues SVTLYGVPLSPFVRKVRLCLQEKGLDYQLETVMPFTPPDWYYAINPLGRIPALKDGDCTLADSSVICQYLEEAYPATPPL YGDSAQARGQVRWLEKYADYELAPLTTFTVFRNRILKPTSGQPCNEEAVQTAMQQKLPPHFDYLEQQLGDNAFFVCDRLS MADIAVTCQLINMSHGGEQLDAQRWPGLAAHHARMLARSAIESLLPGEQRMNAKLQEMGKAATV
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI300360532, Length=109, Percent_Identity=30.2752293577982, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789624, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25185; Mature: 25054
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTLYGVPLSPFVRKVRLCLQEKGLDYQLETVMPFTPPDWYYAINPLGRIPALKDGDCT CEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCE LADSSVICQYLEEAYPATPPLYGDSAQARGQVRWLEKYADYELAPLTTFTVFRNRILKPT ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC SGQPCNEEAVQTAMQQKLPPHFDYLEQQLGDNAFFVCDRLSMADIAVTCQLINMSHGGEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHEEECCCCCCH LDAQRWPGLAAHHARMLARSAIESLLPGEQRMNAKLQEMGKAATV HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVTLYGVPLSPFVRKVRLCLQEKGLDYQLETVMPFTPPDWYYAINPLGRIPALKDGDCT EEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCE LADSSVICQYLEEAYPATPPLYGDSAQARGQVRWLEKYADYELAPLTTFTVFRNRILKPT ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC SGQPCNEEAVQTAMQQKLPPHFDYLEQQLGDNAFFVCDRLSMADIAVTCQLINMSHGGEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHEEECCCCCCH LDAQRWPGLAAHHARMLARSAIESLLPGEQRMNAKLQEMGKAATV HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA