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The map label for this gene is fdhB [H]

Identifier: 146282838

GI number: 146282838

Start: 2724441

End: 2725691

Strand: Direct

Name: fdhB [H]

Synonym: PST_2497

Alternate gene names: 146282838

Gene position: 2724441-2725691 (Clockwise)

Preceding gene: 146282837

Following gene: 146282839

Centisome position: 59.65

GC content: 62.11

Gene sequence:

>1251_bases
ATGAAAGCTTTACTCAATCGCGTGCTCAACAACGACCTGTGCAGTGGCTGCGGCATGTGCAGCTCGGTGGCCGATGACGA
CGCCATCAAGATCCGTCTGACCGGCGATGGCTATCACCGCCCGGTGCTCAATGCGCAGTACCAGAACAAGCCGGTTGCCA
ACGAGCAGACCAGCGCCGCCTTCGCCAAGTCCTGCCCGGCGCTGAACCTGGACATCCGGCCGTACAAGTCGGCCAACTAC
CACCCCATCTGGGGCGAGATCCTCGATACGCTCAAGGGCTATGCCACCGATAACGAGATCCGCCAGGCCGGCTCTTCCGG
CGGTGTGATCTCCGCGCTGGCGCAGTATTGCCTGGAGAAGAACCTGGTCGACGGTGTCATCCAGATCCAGGCCTCGCACT
CCGACCCGCTGGAGAACGTCGCCACCATCAGCCGCTCGCGGCAGAACATCATCGCCTCCTCCGGCTCCCGCTACGCGCCG
GCAAGCCCCGGTGAGGCACTGAAATGGGTGGCCATGTCCACCGAGAAGTACCTGTTCATCGGCAAACCCTGCGACGTCGC
CGCGGTGCGCCAGATGCAGCAGCACGATCCCCGCCTGAAGGAAAACATTCCCTACATCGTCTCCTTCATGTGCGCCGGCA
CCCCGAGCCTGCAGGGTACCGAGCAGGTTCTGGACAAGCTGGAGGTCGAGCGCAAGGACGTCACCGCCTTCCGCTACCGC
GGCGACGGCTGGCCGGGTCTGACCAAGGCGACGCTGAAGAACGGCGACGAGCGCACCATGACCTACAACGATTCCTGGGG
AAAGGTGCTCAACCGTCACCTGCAGACCCGCTGCAAGATCTGCCCGGACGGCATCGGTGAGTTCGCCGATATCGTCTGTG
CCGACGGCTGGGAAGGCGACGAAAAAGGCTACCCCTCGTTCGAAGAGCGCGAGGGCAACTCGCTGATTCTGGTACGCACC
GCAAAAGGCCGCGAACTTTTTCGCAACGCGGAGGCCGATGGTGTTGTCAAAGCGGAGGCGTTCGATACGGGCAGCATCTT
CGCCATCCAGCCGTTCCAGTACTACCGCCGCACGACGATTCTTCCGCGGCTGCTGGCCATGAAGCTGCTGTTGCTCAAAA
CCCCTTCGTACAAAGGCTTCGAGCTTGGCAAAGGGGCCAAGGAGATCGGGTTCTACCAGAGCTTCAAGGCGTTCACCGGT
CTGCTGGTGCGACGCAAGAAGATCAAGAAGCGGGCGCTGGAAACAGCCTGA

Upstream 100 bases:

>100_bases
CTCGCCATCTACCGCAAGCGGCGCCAGCCCGCATGACCGAACTCGTTAAATACTGCCGGTCGCGCATCGCGCCCGACCGG
CCGCTCAAGGGAAGGCAGGT

Downstream 100 bases:

>100_bases
TGGGCTGTGGCGCTCAAGGAACCAATACCTAAGGACTCAGGTTGATGACGAATTTCAGTTCACGCTTCTTCTTTTTTCCG
TTGCTGATCATGGCGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKALLNRVLNNDLCSGCGMCSSVADDDAIKIRLTGDGYHRPVLNAQYQNKPVANEQTSAAFAKSCPALNLDIRPYKSANY
HPIWGEILDTLKGYATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQASHSDPLENVATISRSRQNIIASSGSRYAP
ASPGEALKWVAMSTEKYLFIGKPCDVAAVRQMQQHDPRLKENIPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYR
GDGWPGLTKATLKNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT
AKGRELFRNAEADGVVKAEAFDTGSIFAIQPFQYYRRTTILPRLLAMKLLLLKTPSYKGFELGKGAKEIGFYQSFKAFTG
LLVRRKKIKKRALETA

Sequences:

>Translated_416_residues
MKALLNRVLNNDLCSGCGMCSSVADDDAIKIRLTGDGYHRPVLNAQYQNKPVANEQTSAAFAKSCPALNLDIRPYKSANY
HPIWGEILDTLKGYATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQASHSDPLENVATISRSRQNIIASSGSRYAP
ASPGEALKWVAMSTEKYLFIGKPCDVAAVRQMQQHDPRLKENIPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYR
GDGWPGLTKATLKNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT
AKGRELFRNAEADGVVKAEAFDTGSIFAIQPFQYYRRTTILPRLLAMKLLLLKTPSYKGFELGKGAKEIGFYQSFKAFTG
LLVRRKKIKKRALETA
>Mature_416_residues
MKALLNRVLNNDLCSGCGMCSSVADDDAIKIRLTGDGYHRPVLNAQYQNKPVANEQTSAAFAKSCPALNLDIRPYKSANY
HPIWGEILDTLKGYATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQASHSDPLENVATISRSRQNIIASSGSRYAP
ASPGEALKWVAMSTEKYLFIGKPCDVAAVRQMQQHDPRLKENIPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYR
GDGWPGLTKATLKNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRT
AKGRELFRNAEADGVVKAEAFDTGSIFAIQPFQYYRRTTILPRLLAMKLLLLKTPSYKGFELGKGAKEIGFYQSFKAFTG
LLVRRKKIKKRALETA

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 46085; Mature: 46085

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLNRVLNNDLCSGCGMCSSVADDDAIKIRLTGDGYHRPVLNAQYQNKPVANEQTSAA
CHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
FAKSCPALNLDIRPYKSANYHPIWGEILDTLKGYATDNEIRQAGSSGGVISALAQYCLEK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH
NLVDGVIQIQASHSDPLENVATISRSRQNIIASSGSRYAPASPGEALKWVAMSTEKYLFI
HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE
GKPCDVAAVRQMQQHDPRLKENIPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYR
ECCCCHHHHHHHHHCCCHHHHCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
GDGWPGLTKATLKNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGD
CCCCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCC
EKGYPSFEEREGNSLILVRTAKGRELFRNAEADGVVKAEAFDTGSIFAIQPFQYYRRTTI
CCCCCCHHHCCCCEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHH
LPRLLAMKLLLLKTPSYKGFELGKGAKEIGFYQSFKAFTGLLVRRKKIKKRALETA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKALLNRVLNNDLCSGCGMCSSVADDDAIKIRLTGDGYHRPVLNAQYQNKPVANEQTSAA
CHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
FAKSCPALNLDIRPYKSANYHPIWGEILDTLKGYATDNEIRQAGSSGGVISALAQYCLEK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH
NLVDGVIQIQASHSDPLENVATISRSRQNIIASSGSRYAPASPGEALKWVAMSTEKYLFI
HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE
GKPCDVAAVRQMQQHDPRLKENIPYIVSFMCAGTPSLQGTEQVLDKLEVERKDVTAFRYR
ECCCCHHHHHHHHHCCCHHHHCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
GDGWPGLTKATLKNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGEFADIVCADGWEGD
CCCCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCC
EKGYPSFEEREGNSLILVRTAKGRELFRNAEADGVVKAEAFDTGSIFAIQPFQYYRRTTI
CCCCCCHHHCCCCEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHH
LPRLLAMKLLLLKTPSYKGFELGKGAKEIGFYQSFKAFTGLLVRRKKIKKRALETA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]