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The map label for this gene is kaiC [H]

Identifier: 146282703

GI number: 146282703

Start: 2582165

End: 2583577

Strand: Direct

Name: kaiC [H]

Synonym: PST_2359

Alternate gene names: 146282703

Gene position: 2582165-2583577 (Clockwise)

Preceding gene: 146282697

Following gene: 146282704

Centisome position: 56.53

GC content: 58.74

Gene sequence:

>1413_bases
GTGAAAGCACTTGAGCGCTTGGAAAGCGGTATAGATGGTCTAGACGCCATTACCCACGGCGGTTTCGTCGCCGGGGCCGC
TTATTTAATTCAAGGACGACCGGGTTCGGGCAAGACCATCTTCGCTAACCAGGTCGCCTTCCATCACACGGCCCAAGGCG
GAAAAGTCATTTTCGCCTCTCTCCTTTCAGAGCCGCACGACCGCCTCTTCCAGTACCTGTCGACGCTCAGTTTCTTCAAC
TCAGCCGAGATAGGCGCAGGCATGCTGTACGTCAGCGCCTTCGACACACTCGAGAACGAGGGGCTCGACGAGGTCCTGAA
GCTGCTTCGCCGCGAGATCATCCGGCACAAGGCTACCCTTCTGGTCCTCGACGGGCTGATGAACGTCCGTAGCCGCTCGG
ACACCCCACTGAACACGAAGAAGTTTGTCGCCGAGCTTCAGGTACACGCCAGTTTTGCCGGTTGCACCACGCTGCTTTTG
ACCAGTGCAGAGATCGATCATGGCAGCCCGGAGCTGACGATGGTTGATGGCGTGTTCTCCCTCAAGGAAGAACGGGTCGG
CATGCGCTCCTATCGCCGGCTCGGCGTGCACAAGTACCGGGGCTCGGACTATGTTTCCGGGGAGCACGAGTACGAGATCA
CTAGCAATGGGATTGCCATTTATCCTCGAATCGAAGCACTGTTGAGCCAGCCAACTGCCCCACTCTCACTCGGCGAGCGA
ATGCTACCAACCGGCATTGGGGGCCTGGATGAAGCCTTGGGTGGCGGGTTCATCGAGCGCAGCGCAACGCTGGTCATTGG
TCCCTCCGGTGCAGGCAAGACGACTTTTGCGCTCAATTTCCTTGCCGGCGCGGCACCGGACGAACATGGGGCTTTCTTCG
GTTTCGTCGAGTCGCCCGAACAACTGCTCAGGAAATCAGGTCAGCTTGAGCTCGGGCTTGAAAAGCCGGTTGAGCAAGGG
CGTCTCGACTTTCACTGGCAACCAACGACACAGTTCATTCCTGATCGGATGGCGTTGGATATGCTCGCCCGGATCAGACA
CAAGCAGCTTTCTCGCATCGTAATTGACACATTGGCCGCGCTAACACGCCCCAGCTTGCAGCAAGGCCGACAATTGGAAT
TCGTCAGCGCTCTGGTGAACGAGGCGCGCGCACTGGGTACCACGATGGTGGCAACGTGGGAGCTCAATTTCTTCGCTGCG
AATGCCCCCGTGGCGCCTCCGGCAGAGCTTTGCAGCCTGTTCGATAACGTCATTCTGGCCGGCTTCACCGAGGGGCCAGG
CACCAGCGAGCCAACTCTGAGGATCATAAAACGCCGCAACGGCCCTTATGAGCGCACCACGCTGTCCGCCCAGATCGGAC
TGGGTGGTTACTCATTGACGTCGAACGGCACACACACACCGCAAGATCGCTAG

Upstream 100 bases:

>100_bases
TTCGAAGCATTCCTGCGTCGGCCAAATCGTACATCCGGCGCACTTGTAGCCAGGCCCCGAGACAAATTCCCCAACGCCCT
CATTCACCAGGCAGATTGAC

Downstream 100 bases:

>100_bases
CGGTCGATAAGGTTTTTATCCATGACAACGGTCTTGGTAGTCGATGATGAATACTTGATTGTCGAGGTCCTGACCCTTGC
GCTTGAAGACGTAGGCTTCA

Product: signal transduction ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKALERLESGIDGLDAITHGGFVAGAAYLIQGRPGSGKTIFANQVAFHHTAQGGKVIFASLLSEPHDRLFQYLSTLSFFN
SAEIGAGMLYVSAFDTLENEGLDEVLKLLRREIIRHKATLLVLDGLMNVRSRSDTPLNTKKFVAELQVHASFAGCTTLLL
TSAEIDHGSPELTMVDGVFSLKEERVGMRSYRRLGVHKYRGSDYVSGEHEYEITSNGIAIYPRIEALLSQPTAPLSLGER
MLPTGIGGLDEALGGGFIERSATLVIGPSGAGKTTFALNFLAGAAPDEHGAFFGFVESPEQLLRKSGQLELGLEKPVEQG
RLDFHWQPTTQFIPDRMALDMLARIRHKQLSRIVIDTLAALTRPSLQQGRQLEFVSALVNEARALGTTMVATWELNFFAA
NAPVAPPAELCSLFDNVILAGFTEGPGTSEPTLRIIKRRNGPYERTTLSAQIGLGGYSLTSNGTHTPQDR

Sequences:

>Translated_470_residues
MKALERLESGIDGLDAITHGGFVAGAAYLIQGRPGSGKTIFANQVAFHHTAQGGKVIFASLLSEPHDRLFQYLSTLSFFN
SAEIGAGMLYVSAFDTLENEGLDEVLKLLRREIIRHKATLLVLDGLMNVRSRSDTPLNTKKFVAELQVHASFAGCTTLLL
TSAEIDHGSPELTMVDGVFSLKEERVGMRSYRRLGVHKYRGSDYVSGEHEYEITSNGIAIYPRIEALLSQPTAPLSLGER
MLPTGIGGLDEALGGGFIERSATLVIGPSGAGKTTFALNFLAGAAPDEHGAFFGFVESPEQLLRKSGQLELGLEKPVEQG
RLDFHWQPTTQFIPDRMALDMLARIRHKQLSRIVIDTLAALTRPSLQQGRQLEFVSALVNEARALGTTMVATWELNFFAA
NAPVAPPAELCSLFDNVILAGFTEGPGTSEPTLRIIKRRNGPYERTTLSAQIGLGGYSLTSNGTHTPQDR
>Mature_470_residues
MKALERLESGIDGLDAITHGGFVAGAAYLIQGRPGSGKTIFANQVAFHHTAQGGKVIFASLLSEPHDRLFQYLSTLSFFN
SAEIGAGMLYVSAFDTLENEGLDEVLKLLRREIIRHKATLLVLDGLMNVRSRSDTPLNTKKFVAELQVHASFAGCTTLLL
TSAEIDHGSPELTMVDGVFSLKEERVGMRSYRRLGVHKYRGSDYVSGEHEYEITSNGIAIYPRIEALLSQPTAPLSLGER
MLPTGIGGLDEALGGGFIERSATLVIGPSGAGKTTFALNFLAGAAPDEHGAFFGFVESPEQLLRKSGQLELGLEKPVEQG
RLDFHWQPTTQFIPDRMALDMLARIRHKQLSRIVIDTLAALTRPSLQQGRQLEFVSALVNEARALGTTMVATWELNFFAA
NAPVAPPAELCSLFDNVILAGFTEGPGTSEPTLRIIKRRNGPYERTTLSAQIGLGGYSLTSNGTHTPQDR

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 51039; Mature: 51039

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALERLESGIDGLDAITHGGFVAGAAYLIQGRPGSGKTIFANQVAFHHTAQGGKVIFAS
CCHHHHHHCCCCHHHHHHCCCHHHCEEEEEECCCCCCCEEEECCEEEEECCCCCHHHHHH
LLSEPHDRLFQYLSTLSFFNSAEIGAGMLYVSAFDTLENEGLDEVLKLLRREIIRHKATL
HHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LVLDGLMNVRSRSDTPLNTKKFVAELQVHASFAGCTTLLLTSAEIDHGSPELTMVDGVFS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHH
LKEERVGMRSYRRLGVHKYRGSDYVSGEHEYEITSNGIAIYPRIEALLSQPTAPLSLGER
HHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCEEEEHHHHHHHCCCCCCHHHCCH
MLPTGIGGLDEALGGGFIERSATLVIGPSGAGKTTFALNFLAGAAPDEHGAFFGFVESPE
HCCCCCCCHHHHHCCCEEECCEEEEECCCCCCCCEEEEEHHHCCCCCCCCCEEEECCCHH
QLLRKSGQLELGLEKPVEQGRLDFHWQPTTQFIPDRMALDMLARIRHKQLSRIVIDTLAA
HHHHHCCCEEECCCCCHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRPSLQQGRQLEFVSALVNEARALGTTMVATWELNFFAANAPVAPPAELCSLFDNVILA
HCCCHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHEE
GFTEGPGTSEPTLRIIKRRNGPYERTTLSAQIGLGGYSLTSNGTHTPQDR
ECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MKALERLESGIDGLDAITHGGFVAGAAYLIQGRPGSGKTIFANQVAFHHTAQGGKVIFAS
CCHHHHHHCCCCHHHHHHCCCHHHCEEEEEECCCCCCCEEEECCEEEEECCCCCHHHHHH
LLSEPHDRLFQYLSTLSFFNSAEIGAGMLYVSAFDTLENEGLDEVLKLLRREIIRHKATL
HHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LVLDGLMNVRSRSDTPLNTKKFVAELQVHASFAGCTTLLLTSAEIDHGSPELTMVDGVFS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHH
LKEERVGMRSYRRLGVHKYRGSDYVSGEHEYEITSNGIAIYPRIEALLSQPTAPLSLGER
HHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCEEEEHHHHHHHCCCCCCHHHCCH
MLPTGIGGLDEALGGGFIERSATLVIGPSGAGKTTFALNFLAGAAPDEHGAFFGFVESPE
HCCCCCCCHHHHHCCCEEECCEEEEECCCCCCCCEEEEEHHHCCCCCCCCCEEEECCCHH
QLLRKSGQLELGLEKPVEQGRLDFHWQPTTQFIPDRMALDMLARIRHKQLSRIVIDTLAA
HHHHHCCCEEECCCCCHHCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRPSLQQGRQLEFVSALVNEARALGTTMVATWELNFFAANAPVAPPAELCSLFDNVILA
HCCCHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHEE
GFTEGPGTSEPTLRIIKRRNGPYERTTLSAQIGLGGYSLTSNGTHTPQDR
ECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12477935 [H]