| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is fliY [H]
Identifier: 146282694
GI number: 146282694
Start: 2571274
End: 2572068
Strand: Direct
Name: fliY [H]
Synonym: PST_2350
Alternate gene names: 146282694
Gene position: 2571274-2572068 (Clockwise)
Preceding gene: 146282693
Following gene: 146282695
Centisome position: 56.3
GC content: 62.14
Gene sequence:
>795_bases ATGACGTTTGCGATCCTGCGTCGCCATTTCCTGCTCGGCAGTCTGAGCCTGCTGCTCGGAAGCCTGTTCATGCCGGCATT CGCGGCCGATCTATTGGATGAGATCAAGTCCAACGGCACCCTCGAGGTCGGCCTCGAAGGCACCTACCCACCCTTCAACT ACCAAGACGAAAGCGGTGAGCTGACCGGTTTCGAGGTGGACTTCGCCAATGCGCTGGCAGAGGAGTTGGGGGTCAAGGCC GAGTTCCAGCCGACCAAGTGGGACGGCATCCTCGCCGCCCTGGAATCCAAGCGCCTGGACGTCGTGATCAACCAGGTGAC CATTTCCGAGGAGCGCAAGCAGAAATACGACTTCTCCACGCCCTACACCGTCTCCGGCATCCAGGCCCTCACCCGCAAAG CCGATGCGGACAGCATCAAGCTTCCGACCGACCTCGCCGGCAAGAAGGTCGGGGTTGGCCTTGGCACCAACTACGAGCAG TGGCTGAAGGAGAACGTGCCTCAGGCCGATATCCGCACCTATGACGATGACCCGACCAAGTTCCAGGACCTCGCCGTCGG CCGCATCGACGTGATCCTAGTCGACCGACTGGCCGCCTTCGAGATGGTCGAGAAAACCGGCAATCGCCTGGCGGTGGCCG GTGAAGCCTTCTCCCGCCAGGAGTCCGGCGTTGCCCTGCGCAAGGGCAACCCGCAGCTGCTCGCCGCCATTAACGAAGCC ATAGCCAAGCTGCGCGCCGACGGCACGCTCAAAGAGCTATCGGAGAAGTGGTTCGGGGCTGACGTCACGCAATGA
Upstream 100 bases:
>100_bases ATATTCCTTTAGCGTTGATTCTGATGCTTTCTAATTATTTTCTCGAATAAATGTCCGTCGTTAGAGTTGTGTGACCTTTC CGTTCCCCTGGAGGCCTGCC
Downstream 100 bases:
>100_bases TCGAGGGCAGCCTGCAGCTGGTCCTGGACTCCCTGCCCTTCCTGCTCAAGGGCGCGTGGTGGACCGTGGTGCTGAGCCTG AGTGGGATGTTCTTCGGCCT
Product: cystine transporter subunit
Products: NA
Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELGVKA EFQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFSTPYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQ WLKENVPQADIRTYDDDPTKFQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEA IAKLRADGTLKELSEKWFGADVTQ
Sequences:
>Translated_264_residues MTFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELGVKA EFQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFSTPYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQ WLKENVPQADIRTYDDDPTKFQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEA IAKLRADGTLKELSEKWFGADVTQ >Mature_263_residues TFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELGVKAE FQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFSTPYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQW LKENVPQADIRTYDDDPTKFQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEAI AKLRADGTLKELSEKWFGADVTQ
Specific function: Part of a binding-protein-dependent transport system for cystine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=266, Percent_Identity=65.4135338345865, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1787085, Length=249, Percent_Identity=30.9236947791165, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1787031, Length=222, Percent_Identity=31.981981981982, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1788649, Length=259, Percent_Identity=30.8880308880309, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787088, Length=224, Percent_Identity=29.9107142857143, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=29.7413793103448, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786876, Length=240, Percent_Identity=27.0833333333333, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28977; Mature: 28846
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC LTGFEVDFANALAEELGVKAEFQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFST EEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHHCCCCC PYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQWLKENVPQADIRTYDDDPTK CCCHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCH FQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEA HHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCEEEECCCHHHHHHHHHH IAKLRADGTLKELSEKWFGADVTQ HHHHHCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC LTGFEVDFANALAEELGVKAEFQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFST EEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHHCCCCC PYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQWLKENVPQADIRTYDDDPTK CCCHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCH FQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEA HHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCEEEECCCHHHHHHHHHH IAKLRADGTLKELSEKWFGADVTQ HHHHHCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]