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The map label for this gene is dcyD [H]

Identifier: 146282693

GI number: 146282693

Start: 2570060

End: 2571169

Strand: Direct

Name: dcyD [H]

Synonym: PST_2349

Alternate gene names: 146282693

Gene position: 2570060-2571169 (Clockwise)

Preceding gene: 146282692

Following gene: 146282694

Centisome position: 56.27

GC content: 66.94

Gene sequence:

>1110_bases
ATGCGTGGCGATGCGCGGCCTGTCAGCACTGCGCCCATATCGCCTTGCTGCACCTTCAGATTGCCTTCTACAGTAATGAT
TCGTCCCTGTTCAGAAGCTTGCCCGATGCTCACCGACGCCCTCGCCCGCTTCCCGCGCCTTGAATTGATCACCACCCCCA
CGCCCCTGGAACACTTGCCGCGGCTGTCGCGTCACCTGGGTCGTGATATCTGGATCAAGCGCGACGACCTCACCCCGCTG
GCCCTCGGTGGCAACAAGGCGCGCAAGCTCGAATACCTCGGTGCCGACGCCCTGGCTCTGGGCGCCGATGTGCTGGTAAC
CGCCGGTGCCATCCAATCCAACCATGTGCGCCAGACCGCAGCCCTGGCGGCCAGACAGGGTCTTGGCTGCCTGGCGCTGC
TGGAGAATCCGCTGGGCACGAACGAGGACAACTACCTGGGCAATGGCAACCGCCTGCTGCTCGACCTGTTCGGCAGCGAG
GTCGAAGCGGTCGCCAACCTGGATAACGCCGATGAGTTGCTGCAGGCGTCGGCCGAGCGTCTGCGCAGCGCTGGGCGCAG
ACCCTACGTGGTGCCCATCGGTGGCTCCAATGCGCTTGGTGCGTTGGGCTATGTACGCGCCGGCCTGGAGCTGGCCGAGC
AGATGCATGGCGCGGGCGAGGATTTTGCCGCCGTGGCCCTCGCGTCCGGCAGCGCCGGAACCCACAGCGGCCTGGCGCTG
GCGCTGGCGCATGCCCGGCCGAGCAGCCGGGTGGTCGGGGTCACGGTATCGCGGCCACAGGCGACACAGCGGCCCAAGGT
CGAGGGGCTGCTGCAGCGCACCGCCGAGCTGCTCGGCGTCCAGGTTCCAGCGGGATTGCAGGTCGAACTGTGGGACCAGT
ATTTCGCCCCGCGCTACGGTGAACCGAATGCCGCCACTCTGGCCGCGATCCGCCTGCTGGCCGAACAGGAAGGCGTGCTG
CTCGATCCGGTTTATACCGGTAAGGCCTTCGCCGGCCTGCTCAACGGGCTGGCCCGGGGCGCCTTCCCCGGAACGGGCCC
GCTGCTGTTTCTGCACACCGGTGGTGCCCCGGCATTGTTCGCCTATTATCCATGGGCACTGGGTGCATAA

Upstream 100 bases:

>100_bases
GGTTTTCCTGAGACGGGTGAGTCTGCCCTGGCTTCGCCGGGCTCTGGTGTAGCGACCGAAGAATAACAAGGCTGCACCGA
GGCCTGTGAAGCCGGCTGAC

Downstream 100 bases:

>100_bases
CGCCATATTCCTTTAGCGTTGATTCTGATGCTTTCTAATTATTTTCTCGAATAAATGTCCGTCGTTAGAGTTGTGTGACC
TTTCCGTTCCCCTGGAGGCC

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRGDARPVSTAPISPCCTFRLPSTVMIRPCSEACPMLTDALARFPRLELITTPTPLEHLPRLSRHLGRDIWIKRDDLTPL
ALGGNKARKLEYLGADALALGADVLVTAGAIQSNHVRQTAALAARQGLGCLALLENPLGTNEDNYLGNGNRLLLDLFGSE
VEAVANLDNADELLQASAERLRSAGRRPYVVPIGGSNALGALGYVRAGLELAEQMHGAGEDFAAVALASGSAGTHSGLAL
ALAHARPSSRVVGVTVSRPQATQRPKVEGLLQRTAELLGVQVPAGLQVELWDQYFAPRYGEPNAATLAAIRLLAEQEGVL
LDPVYTGKAFAGLLNGLARGAFPGTGPLLFLHTGGAPALFAYYPWALGA

Sequences:

>Translated_369_residues
MRGDARPVSTAPISPCCTFRLPSTVMIRPCSEACPMLTDALARFPRLELITTPTPLEHLPRLSRHLGRDIWIKRDDLTPL
ALGGNKARKLEYLGADALALGADVLVTAGAIQSNHVRQTAALAARQGLGCLALLENPLGTNEDNYLGNGNRLLLDLFGSE
VEAVANLDNADELLQASAERLRSAGRRPYVVPIGGSNALGALGYVRAGLELAEQMHGAGEDFAAVALASGSAGTHSGLAL
ALAHARPSSRVVGVTVSRPQATQRPKVEGLLQRTAELLGVQVPAGLQVELWDQYFAPRYGEPNAATLAAIRLLAEQEGVL
LDPVYTGKAFAGLLNGLARGAFPGTGPLLFLHTGGAPALFAYYPWALGA
>Mature_369_residues
MRGDARPVSTAPISPCCTFRLPSTVMIRPCSEACPMLTDALARFPRLELITTPTPLEHLPRLSRHLGRDIWIKRDDLTPL
ALGGNKARKLEYLGADALALGADVLVTAGAIQSNHVRQTAALAARQGLGCLALLENPLGTNEDNYLGNGNRLLLDLFGSE
VEAVANLDNADELLQASAERLRSAGRRPYVVPIGGSNALGALGYVRAGLELAEQMHGAGEDFAAVALASGSAGTHSGLAL
ALAHARPSSRVVGVTVSRPQATQRPKVEGLLQRTAELLGVQVPAGLQVELWDQYFAPRYGEPNAATLAAIRLLAEQEGVL
LDPVYTGKAFAGLLNGLARGAFPGTGPLLFLHTGGAPALFAYYPWALGA

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=324, Percent_Identity=60.4938271604938, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 38811; Mature: 38811

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDARPVSTAPISPCCTFRLPSTVMIRPCSEACPMLTDALARFPRLELITTPTPLEHLP
CCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
RLSRHLGRDIWIKRDDLTPLALGGNKARKLEYLGADALALGADVLVTAGAIQSNHVRQTA
HHHHHCCCCEEEEECCCCEEEECCCCHHEEHHCCCCHHHHCCHHEEEECCCCCCHHHHHH
ALAARQGLGCLALLENPLGTNEDNYLGNGNRLLLDLFGSEVEAVANLDNADELLQASAER
HHHHHCCCCEEEECCCCCCCCCCCEECCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHH
LRSAGRRPYVVPIGGSNALGALGYVRAGLELAEQMHGAGEDFAAVALASGSAGTHSGLAL
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEE
ALAHARPSSRVVGVTVSRPQATQRPKVEGLLQRTAELLGVQVPAGLQVELWDQYFAPRYG
EEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEHHHHCCCCCC
EPNAATLAAIRLLAEQEGVLLDPVYTGKAFAGLLNGLARGAFPGTGPLLFLHTGGAPALF
CCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEE
AYYPWALGA
EECCHHCCC
>Mature Secondary Structure
MRGDARPVSTAPISPCCTFRLPSTVMIRPCSEACPMLTDALARFPRLELITTPTPLEHLP
CCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
RLSRHLGRDIWIKRDDLTPLALGGNKARKLEYLGADALALGADVLVTAGAIQSNHVRQTA
HHHHHCCCCEEEEECCCCEEEECCCCHHEEHHCCCCHHHHCCHHEEEECCCCCCHHHHHH
ALAARQGLGCLALLENPLGTNEDNYLGNGNRLLLDLFGSEVEAVANLDNADELLQASAER
HHHHHCCCCEEEECCCCCCCCCCCEECCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHH
LRSAGRRPYVVPIGGSNALGALGYVRAGLELAEQMHGAGEDFAAVALASGSAGTHSGLAL
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEE
ALAHARPSSRVVGVTVSRPQATQRPKVEGLLQRTAELLGVQVPAGLQVELWDQYFAPRYG
EEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEHHHHCCCCCC
EPNAATLAAIRLLAEQEGVLLDPVYTGKAFAGLLNGLARGAFPGTGPLLFLHTGGAPALF
CCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEE
AYYPWALGA
EECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA