| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is imuB [H]
Identifier: 146282690
GI number: 146282690
Start: 2563402
End: 2564814
Strand: Direct
Name: imuB [H]
Synonym: PST_2346
Alternate gene names: 146282690
Gene position: 2563402-2564814 (Clockwise)
Preceding gene: 146282689
Following gene: 146282691
Centisome position: 56.12
GC content: 67.8
Gene sequence:
>1413_bases ATGCTCTGGGCCTGCATTCTACTGCCGCAACTGGCCATGGACGGCATCCTGCGCCACCGCGACGATGCCGCCGCACCACT GGTTCTGCTCGCCGGCCCGCCACAGCGCCGCGTGCTGCAGGCTGTCAACACCGCCGCCCGCAAGCTCGGCCTCAAACCAG GGCAATCGCTGGTCGCAGCCCAGGCATTGACCCACGACTTCGCCACTGCCGATTACGACCCGCTGATGATCGAACGCTGG CAGCAGTTTCTGGCGGCCTGGGGTTACGGCTACAGCGCCCAGGTCAGCTTGCACTACCCGCGCTGTCTGCTGCTGGAGGT GCATTCCAGCCTCGGCCTGTTCGGCCCCTGGCCACGATTCGAGAAGCGTCTGCGCGAGGAGCTCACAGACCTGGGCTTCC GCCACCGCATCACCCTGGCACCCAACCCGGCGGCCGCGCGCGTCCTCGCCAATGCCCATGACGGGCTGGCCGTGACCGAT ACGGCCACGCTGCATCAGGTGCTCGGGGTACTACCGATCGAGCGCCTCGGCCTGCCCCGCGAAGTCAGCACATCGCTGGT ACGCATGGGCCTGCGCCATCTTCATCAACTGCTCGCCTTGCCGCGCGACAGCCTGGCCAGACGCTTTCCGGCCGAAGTGC TGGCCCAGCTCGACACCCTGCTCGGGCATCGGCCGCTACCTCTGGAGTTCTACCGCCCACCGGATGTCTTCGACACCCGC ATCGAACTGAATTTCGAGGTGGAGTCCCACCAGGCCCTGCTGTTTCCATTGCGCAGACTGACCGCCGACCTGGCCGCCTT TCTCGCCGGGCGGGACAGCGGCGTCCAGCGTTTCAGTCTGTACCTGGAACATCGCACCCTGCCCGACAGCGAGGTGCCGG TCGGCCTGCTCAGTACCGAACGCGAGCCCGCCATGCTGTTCGAACTGACTCGTGGCCGCCTCGAGCACCTGCAACTGCCG GCCCCCGTCCTGGCCGTGCGTCTGCTGGCTCGTGATCTGCCAGCCTTCACGCCGGCCCATCAGGCCTTGTTCGACGAGCG CCCGCAGCAGAATGTGCCCTGGGAGCAACTGCGCGAACGCCTCCGCGCCCGACTGGGCGACGATGCCGTAGTCTCGCTGA GCGCACGAGCGGACCACCGCCCGGAATGCGCCTGGCGGGAAAGCAGCCTCGCCCACACCGACCCCTTGCCCCAAGCAGGT TTGCGCCCCGGCTGGCTGCTGAACACCCCGCAACCCTTGCGCGAAGAGGGTCTGCTCACCCTGGCTGGCCCCGAGCGCAT CGAGTCCGGCTGGTGGGATGGTGCCGACGCGCGGCGCGACTACTATCGGGTGCAAACCACTACCGGCCAACAGGGTTGGG CGTTTCGCGCCCTTACCGGCGGGCCGCTGCTGCTGCACGGCTGGTTCGCATGA
Upstream 100 bases:
>100_bases CCCTCGAGGCACAGCCGGTGCAACTACGGGTCATCAAGTGCCGCGGCGGCCTGGCTCCGGCCCGGCCGCTACCAGCCAGC GCCTGGCAATAGGTGCGACG
Downstream 100 bases:
>100_bases ACGCCGAATACGCCGAGCTGCACTGCCTGTCCAACTTCAGCTTCCAGCGGGGTGCATCCAGCGCGCGCGAACTCTTCGAG CGCGCCAAGCGCCAGGGCTA
Product: DNA repair nucleotidyltransferase/DNA polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA
Sequences:
>Translated_470_residues MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA >Mature_470_residues MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 52760; Mature: 52760
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAA CEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH QALTHDFATADYDPLMIERWQQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCHHH EKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTDTATLHQVLGVLPIERLGLPR HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCHHHCCCCH EVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR HHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTE EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEHHCCC REPAMLFELTRGRLEHLQLPAPVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRER CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH LRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAGLRPGWLLNTPQPLREEGLLT HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEEE LAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA ECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCC >Mature Secondary Structure MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAA CEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH QALTHDFATADYDPLMIERWQQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCHHH EKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTDTATLHQVLGVLPIERLGLPR HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCHHHCCCCH EVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR HHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTE EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEHHCCC REPAMLFELTRGRLEHLQLPAPVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRER CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH LRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAGLRPGWLLNTPQPLREEGLLT HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEEE LAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA ECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA