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The map label for this gene is ahyR [H]

Identifier: 145301148

GI number: 145301148

Start: 4623908

End: 4624690

Strand: Direct

Name: ahyR [H]

Synonym: ASA_4324

Alternate gene names: 145301148

Gene position: 4623908-4624690 (Clockwise)

Preceding gene: 145301130

Following gene: 145301150

Centisome position: 98.33

GC content: 53.51

Gene sequence:

>783_bases
ATGTACATGTTTAACGATGCGATCTGGGAACACATCGATCGATTCACCAAAGCCAAGAAGACCAGCGAGATCCAGCAGCA
ACTGGAGCGCTTCAGTCATCAAATGGGCTTTGATTACTTCCGTCTGCTGATTATTTTCCCCATCAGCATGCAGAAATCCC
ATGTGGCACTGTTCAACAACTGCCCCACCAGCTGGTTCGAAGCCTACAGCGAACGGCACTACCTGACCCAGGATCCAGTG
GTGTTCCTGGGCCTGAAGCAGACCCAGCCCATCTTTTGGAACAAGCTCGACTGCGACTCACCCTGGCTACCCAGCGCCAG
CCGGGAAGTCATGAATCTGGCCGCCGATTTCGGAGTGAGAAACGGCGTCTCCTTCCCGCTGCATACGCCGCAGGGGGAAC
ACGGCATCCTCTCTTTCATCAGCAAGGAAAAATCCAATTCCGATCTGATGTTTGAAAACGTTCCCTTGTTGTCGTTCTGT
GCCAGCTACATCTTCAATTCGGCGTTGCAACTGATAAAAAGCAGACCGGATTTGATGAAGCACCTGACCGAGCTGTCAGA
TCGGGAGAAGGAGTGCCTGTTCTGGGCCAGTGAGGGCAAGACCTCCTGGGAGATCGCCACCATACTCGGCATCAGCGAAC
GCACAGTCAACTTCCACCTCAATCAGGTCACGAACAAGACTGACTCGAAGAATCGCAACCAGGCGATCGCCAAGAGTATC
TCCAGCGGCATCATAGTGCCCTCGCTGGACGACGTGACCATCACCAACCTGCGGTTGTCATAA

Upstream 100 bases:

>100_bases
TTTAAGCAAGCACGGGAGTCACTGGCGTTGGTAGTCACAACACCAAATCAATAAATAAAAAATATCTTTTCGATCAATGT
GATAGGGATCGAAAAAGGAG

Downstream 100 bases:

>100_bases
CGACCACCCCGCCAGACAAACAAAAAGAGCCGCATTGCGGCTCTTTTGTATGCGTGTAATATAGTTGGATACCCAATCAC
TCTACATACCGTATCCTTCT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MYMFNDAIWEHIDRFTKAKKTSEIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNNCPTSWFEAYSERHYLTQDPV
VFLGLKQTQPIFWNKLDCDSPWLPSASREVMNLAADFGVRNGVSFPLHTPQGEHGILSFISKEKSNSDLMFENVPLLSFC
ASYIFNSALQLIKSRPDLMKHLTELSDREKECLFWASEGKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSI
SSGIIVPSLDDVTITNLRLS

Sequences:

>Translated_260_residues
MYMFNDAIWEHIDRFTKAKKTSEIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNNCPTSWFEAYSERHYLTQDPV
VFLGLKQTQPIFWNKLDCDSPWLPSASREVMNLAADFGVRNGVSFPLHTPQGEHGILSFISKEKSNSDLMFENVPLLSFC
ASYIFNSALQLIKSRPDLMKHLTELSDREKECLFWASEGKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSI
SSGIIVPSLDDVTITNLRLS
>Mature_260_residues
MYMFNDAIWEHIDRFTKAKKTSEIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNNCPTSWFEAYSERHYLTQDPV
VFLGLKQTQPIFWNKLDCDSPWLPSASREVMNLAADFGVRNGVSFPLHTPQGEHGILSFISKEKSNSDLMFENVPLLSFC
ASYIFNSALQLIKSRPDLMKHLTELSDREKECLFWASEGKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSI
SSGIIVPSLDDVTITNLRLS

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=238, Percent_Identity=30.2521008403361, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 29893; Mature: 29893

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMFNDAIWEHIDRFTKAKKTSEIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHC
CPTSWFEAYSERHYLTQDPVVFLGLKQTQPIFWNKLDCDSPWLPSASREVMNLAADFGVR
CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
NGVSFPLHTPQGEHGILSFISKEKSNSDLMFENVPLLSFCASYIFNSALQLIKSRPDLMK
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
HLTELSDREKECLFWASEGKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSI
HHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHH
SSGIIVPSLDDVTITNLRLS
HCCCEECCCCCEEEEEEEEC
>Mature Secondary Structure
MYMFNDAIWEHIDRFTKAKKTSEIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHC
CPTSWFEAYSERHYLTQDPVVFLGLKQTQPIFWNKLDCDSPWLPSASREVMNLAADFGVR
CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
NGVSFPLHTPQGEHGILSFISKEKSNSDLMFENVPLLSFCASYIFNSALQLIKSRPDLMK
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
HLTELSDREKECLFWASEGKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSI
HHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHH
SSGIIVPSLDDVTITNLRLS
HCCCEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]