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The map label for this gene is yhgF [H]

Identifier: 145300942

GI number: 145300942

Start: 4382699

End: 4385005

Strand: Direct

Name: yhgF [H]

Synonym: ASA_4094

Alternate gene names: 145300942

Gene position: 4382699-4385005 (Clockwise)

Preceding gene: 145300941

Following gene: 145300947

Centisome position: 93.2

GC content: 61.55

Gene sequence:

>2307_bases
ATGCACAGCCATGTAATAGAGAGACAGATTGCCGGTGAGCTGAATGCCCGTCCGGAACAAGTGCAGGCAGCCGTGCGCCT
GCTGGATGAAGGCTCGACAGTACCCTTTATCGCCCGTTACCGCAAAGAGGTGACTGGTGGCCTGGATGACAGCCAGCTAC
GCACCCTGGAGAGCCGCCTTGGTTATCTGCGCGAGCTGGAGGATCGGCGCCAGGTAATCATTCGCTCCATCGAGGAGCAA
GGCAAACTCACCCCTGAGCTGACCCGCGAGCTGAATGGCGCCGACAGTAAGACCCGGCTGGAAGATCTCTATCTCCCTTA
CAAACCCAAGCGTCGCACCAAGGGACAGATGGCCATAGAGGCGGGGCTCGAGCCACTGGCGACCCTGCTGCTCACGGACC
CGATGCGGGATCCCGAACAGGCCGCTGCCGGCTTCCTCAATTCCGAGCAAGGCATCACCGACAGCAAGACAGCCCTTGAT
GGAGCCCGCTACATACTGATGGAGCGCTTCGCAGAGCAGGCAGACCTGCTGGAGAAATTGCGGGACTATCTGTGGCACAA
CGCCACCCTGCGCGCTCGCGTGGTGGCAGGCAAGGAACAGGAAGGGGCCAAGTTCAAGGACTACTTCGAACATGACGAGC
CGCTGCACAAGGCTCCCTCCCACCGGGTACTGGCGATGCTGCGCGGGCGCAATGAGGGGGTCCTCAATCTGGCGCTGGTC
ACAGGTGAAAACGAGAGCGCCAGCCCTTGTGAAGGCATCATAGCCCACCACCTCAAACTCAATCTGCAAAGCCGTCCGGC
CGACAAGTGGCTGCAAGGTGTCGTGAGCTGGACATGGAAGATCAAGCTGTCGCTGCAGATGGAGACCGAGCTGATCGGCC
GGATCCGCGAATCGGCAGAAGAGGAGGCGATCAAGGTGTTTGCCATGAACCTCCAGGATCTGCTGATGGCAGCCCCGGCT
GGCATGCGCTGCACCATGGGGCTGGATCCAGGTATCCGTACCGGGGTCAAGGTGGCCGTGGTCGACGCCACTGGCAAGCT
GGTCGATCACGCCACTATCTACCCGTTCGAGCCGAAGAAACAGGTCGATCAGAGCCTCAAAACCCTTAGCGAGCTGTGCC
AGAAGCACAAGGTGGAGCTCATCAGCATCGGCAACGGCACCGCCTCGCGGGAAACCGATCGGCTGGTGAGCGAACTATTC
GAGCGCTACCCCGCAGCCAAGGCGCAAAAGGTTGTGGTCAGCGAGGCGGGTGCCTCTGTCTACTCCGCTTCCGAGCTTGC
CTCCCAGGAGTTCCCGGATCTGGATGTCTCTATCCGTGGCGCCGTCTCCATCGCCCGCCGCCTGCAGGATCCCCTGGCCG
AGCTGGTCAAGATCGATCCCAAGAGTATCGGTGTGGGCCAATACCAGCACGACGTAGGCCAGAGCCAGCTTGCACGGCGG
CTGGATGCAGTGGTCGAGGATTGCGTGAACGCAGTCGGGGTGGATGTGAACACAGCCTCGGTCGCCCTGTTGAATCGGGT
CTCCGGTCTCTCCCAGACACTAGCCCAGAATATCGTCGCCTATCGGGACGAGCACGGCGCCTTCCAGAGCCACCAGCAGT
TGCTGAAGGTGAGCCGGCTCGGCCCCAAGGCATTCGAGCAGTGTGCCGGCTTCCTGCGTATTCGTGGGGGCAGCAATCCT
CTCGACAGCTCGGCGGTACACCCGGAATCCTACCCTGTGGTTGAAAGGATCCTGGCGCAACTCCAGCAGCAAGTTGAAAG
CCTGCTCGGCAACGGCAGCCTGCTACGCAGCCTGAAGCCGGCTGACTATACGGATGAGCAGTTCGGCGTGCCCACTGTCA
CCGACATCATAGGCGAGCTGGACAAGCCTGGCCGCGACCCGCGCCCCGAGTTCAAGACCGCCACCTTCAAGGATGGGGTA
GAGAAGATAAGCGACCTGGCGCCAGAGATGATATTGGAAGGCGTGGTCACCAACGTCACCAACTTCGGCGCCTTCGTCGA
TATCGGTGTCCATCAGGACGGGCTGGTCCACATATCCTCCCTGACGGATCGCTTCGTGAAGGACCCTCGCGAGGTGGTCA
AGGCGGGGGACATAGTGAGGGTCAAGGTGCTGGAGGTCGATGCCCCGCGCAAGCGGATCAGCCTGACCATGCGGCTGGAC
GAAAAAGCCGGACAACCGGCCCGCAAGCCTGCCGAGCCACGCAACGCTGGCAGTGCCAAACCCAGAAACGAGCCCCGTCA
GGCAGCGCCCATGGGGGGCGCCATGGGCAGTGCGTTCGCTGCTGCTCTCTCCAAAACCAAGAAATGA

Upstream 100 bases:

>100_bases
CCCCATGGCGTAGAGACGCGACCTGCTGGCAGGCAATATACCCAGCAGCAAGTCGACGCCACCCAGGCCAGTTGGATAGA
AGCGACCACAGAGATCCCCG

Downstream 100 bases:

>100_bases
AAAAAGCCCCGCGAGGGGCTTTTTTACAAGGCCAGGCTTACTGACTGAGAGTAGCCAGAATACCTTCCGGATCCTGATGT
TGTACCAGCACCTCCCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MHSHVIERQIAGELNARPEQVQAAVRLLDEGSTVPFIARYRKEVTGGLDDSQLRTLESRLGYLRELEDRRQVIIRSIEEQ
GKLTPELTRELNGADSKTRLEDLYLPYKPKRRTKGQMAIEAGLEPLATLLLTDPMRDPEQAAAGFLNSEQGITDSKTALD
GARYILMERFAEQADLLEKLRDYLWHNATLRARVVAGKEQEGAKFKDYFEHDEPLHKAPSHRVLAMLRGRNEGVLNLALV
TGENESASPCEGIIAHHLKLNLQSRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAEEEAIKVFAMNLQDLLMAAPA
GMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKKQVDQSLKTLSELCQKHKVELISIGNGTASRETDRLVSELF
ERYPAAKAQKVVVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARR
LDAVVEDCVNAVGVDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFQSHQQLLKVSRLGPKAFEQCAGFLRIRGGSNP
LDSSAVHPESYPVVERILAQLQQQVESLLGNGSLLRSLKPADYTDEQFGVPTVTDIIGELDKPGRDPRPEFKTATFKDGV
EKISDLAPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLD
EKAGQPARKPAEPRNAGSAKPRNEPRQAAPMGGAMGSAFAAALSKTKK

Sequences:

>Translated_768_residues
MHSHVIERQIAGELNARPEQVQAAVRLLDEGSTVPFIARYRKEVTGGLDDSQLRTLESRLGYLRELEDRRQVIIRSIEEQ
GKLTPELTRELNGADSKTRLEDLYLPYKPKRRTKGQMAIEAGLEPLATLLLTDPMRDPEQAAAGFLNSEQGITDSKTALD
GARYILMERFAEQADLLEKLRDYLWHNATLRARVVAGKEQEGAKFKDYFEHDEPLHKAPSHRVLAMLRGRNEGVLNLALV
TGENESASPCEGIIAHHLKLNLQSRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAEEEAIKVFAMNLQDLLMAAPA
GMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKKQVDQSLKTLSELCQKHKVELISIGNGTASRETDRLVSELF
ERYPAAKAQKVVVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARR
LDAVVEDCVNAVGVDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFQSHQQLLKVSRLGPKAFEQCAGFLRIRGGSNP
LDSSAVHPESYPVVERILAQLQQQVESLLGNGSLLRSLKPADYTDEQFGVPTVTDIIGELDKPGRDPRPEFKTATFKDGV
EKISDLAPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLD
EKAGQPARKPAEPRNAGSAKPRNEPRQAAPMGGAMGSAFAAALSKTKK
>Mature_768_residues
MHSHVIERQIAGELNARPEQVQAAVRLLDEGSTVPFIARYRKEVTGGLDDSQLRTLESRLGYLRELEDRRQVIIRSIEEQ
GKLTPELTRELNGADSKTRLEDLYLPYKPKRRTKGQMAIEAGLEPLATLLLTDPMRDPEQAAAGFLNSEQGITDSKTALD
GARYILMERFAEQADLLEKLRDYLWHNATLRARVVAGKEQEGAKFKDYFEHDEPLHKAPSHRVLAMLRGRNEGVLNLALV
TGENESASPCEGIIAHHLKLNLQSRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAEEEAIKVFAMNLQDLLMAAPA
GMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKKQVDQSLKTLSELCQKHKVELISIGNGTASRETDRLVSELF
ERYPAAKAQKVVVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARR
LDAVVEDCVNAVGVDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFQSHQQLLKVSRLGPKAFEQCAGFLRIRGGSNP
LDSSAVHPESYPVVERILAQLQQQVESLLGNGSLLRSLKPADYTDEQFGVPTVTDIIGELDKPGRDPRPEFKTATFKDGV
EKISDLAPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLD
EKAGQPARKPAEPRNAGSAKPRNEPRQAAPMGGAMGSAFAAALSKTKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=780, Percent_Identity=32.0512820512821, Blast_Score=354, Evalue=2e-97,
Organism=Homo sapiens, GI27597090, Length=706, Percent_Identity=22.8045325779037, Blast_Score=106, Evalue=1e-22,
Organism=Escherichia coli, GI87082262, Length=756, Percent_Identity=69.8412698412698, Blast_Score=1064, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=43.421052631579, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=712, Percent_Identity=28.0898876404494, Blast_Score=222, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=633, Percent_Identity=22.9067930489731, Blast_Score=86, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62484314, Length=776, Percent_Identity=30.6701030927835, Blast_Score=352, Evalue=6e-97,
Organism=Drosophila melanogaster, GI24640080, Length=723, Percent_Identity=19.640387275242, Blast_Score=93, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 84487; Mature: 84487

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHVIERQIAGELNARPEQVQAAVRLLDEGSTVPFIARYRKEVTGGLDDSQLRTLESRL
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLRELEDRRQVIIRSIEEQGKLTPELTRELNGADSKTRLEDLYLPYKPKRRTKGQMAIE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
AGLEPLATLLLTDPMRDPEQAAAGFLNSEQGITDSKTALDGARYILMERFAEQADLLEKL
HCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWHNATLRARVVAGKEQEGAKFKDYFEHDEPLHKAPSHRVLAMLRGRNEGVLNLALV
HHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEE
TGENESASPCEGIIAHHLKLNLQSRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAE
ECCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCEEEEEEEEEEHHHHHHHHHHHHHH
EEAIKVFAMNLQDLLMAAPAGMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKK
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHCCEECCCCCHH
QVDQSLKTLSELCQKHKVELISIGNGTASRETDRLVSELFERYPAAKAQKVVVSEAGASV
HHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
YSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARR
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHH
LDAVVEDCVNAVGVDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFQSHQQLLKVSRL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GPKAFEQCAGFLRIRGGSNPLDSSAVHPESYPVVERILAQLQQQVESLLGNGSLLRSLKP
CHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
ADYTDEQFGVPTVTDIIGELDKPGRDPRPEFKTATFKDGVEKISDLAPEMILEGVVTNVT
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLD
HCCCEEEECCCCCCCEEHHHHHHHHHHCHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEC
EKAGQPARKPAEPRNAGSAKPRNEPRQAAPMGGAMGSAFAAALSKTKK
HHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSHVIERQIAGELNARPEQVQAAVRLLDEGSTVPFIARYRKEVTGGLDDSQLRTLESRL
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLRELEDRRQVIIRSIEEQGKLTPELTRELNGADSKTRLEDLYLPYKPKRRTKGQMAIE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
AGLEPLATLLLTDPMRDPEQAAAGFLNSEQGITDSKTALDGARYILMERFAEQADLLEKL
HCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWHNATLRARVVAGKEQEGAKFKDYFEHDEPLHKAPSHRVLAMLRGRNEGVLNLALV
HHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEE
TGENESASPCEGIIAHHLKLNLQSRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAE
ECCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCEEEEEEEEEEHHHHHHHHHHHHHH
EEAIKVFAMNLQDLLMAAPAGMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKK
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHCCEECCCCCHH
QVDQSLKTLSELCQKHKVELISIGNGTASRETDRLVSELFERYPAAKAQKVVVSEAGASV
HHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
YSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARR
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHH
LDAVVEDCVNAVGVDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFQSHQQLLKVSRL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GPKAFEQCAGFLRIRGGSNPLDSSAVHPESYPVVERILAQLQQQVESLLGNGSLLRSLKP
CHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
ADYTDEQFGVPTVTDIIGELDKPGRDPRPEFKTATFKDGVEKISDLAPEMILEGVVTNVT
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLD
HCCCEEEECCCCCCCEEHHHHHHHHHHCHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEC
EKAGQPARKPAEPRNAGSAKPRNEPRQAAPMGGAMGSAFAAALSKTKK
HHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]