| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is katE [H]
Identifier: 145300894
GI number: 145300894
Start: 4339988
End: 4341436
Strand: Direct
Name: katE [H]
Synonym: ASA_4040
Alternate gene names: 145300894
Gene position: 4339988-4341436 (Clockwise)
Preceding gene: 145300891
Following gene: 145300896
Centisome position: 92.29
GC content: 62.53
Gene sequence:
>1449_bases ATGACTGACAATACACTGCACAGTGCCAACGGCGCCCCAGTCGTCGACAACAACAACAGCCTTACTGCCGGTCCCCGCGG CCCCGTGCTGATGCAAGATATCTGGTTGATGGAGAAACTCGCCCACTTCGACCGCGAGCGCATTCCCGAGCGGGTGGTTC ACGCCAAAGGCTCGGGCGCCTACGGCACCTTTACCGTGACCCACGACATCAGCGCGTTCAGCAAGGCCGACCTGTTCAAC GCCATCGGCAAGCAGACCCCGGTCTTCCTGCGCTTCTCCACCGTAGCCGGTGAGAAGGGGGCTGCCGATGCCGAGCGGGA CGTACGCGGCTTCGCCCTCAAGTTCTACACAGAGCAGGGCAACTGGGATCTGGTGGGCAACAACACCCCGGTCTTTTTCA TCCGCGAACCGCTGAAATTCCCCGATTTCATCCACACCCAGAAGCGGGATCCGCGCACCAACCTGCGCAGTGCCACCGCC GCCTGGGACTTCTGGTCACGCCATCCCGAATCCCTGCATCAGGTCACCATACTGTTCAGCGATCGCGGCATTCCCAAGAG TCTGCGGGAGATGAACGGCTACGGCAGCCACACCTTCAGCTTTATCAACGACGCCAACGAACGCTTCTGGGTCAAATTCC ACTTCAAGACCGAGCAGGGTCACAGCTTCTACACAGATGAAGAGGCGGCCAATGTCGTCGGTCAGGATAGAGAGACCAGC CAGACCGATCTGTTCAATGCCATTGAGCGGGGCGACTTCCCGCGCTGGAAGGTCTATGTGCAGGTGATGCCGGAGGCCGA TGCCCAGAGCTACCGGATCCACCCGTTCGACCTCACCAAGGTGTGGCCGCACAGCGACTATCCGCTAATCCCGGTAGGCG TGCTGGAGCTCAACCAGAACCCGGACAACTACTTCGCCCACGTGGAGCAGGCTGCGTTCACCCCAGCCAACGTGGTGCCC GGCATCGGCTTCTCGCCGGATCGCATGCTGCAGGGACGGCTCTTCTCCTACGGCGACACCCAGCGCTATCGCCTCGGGGT CAACCACGGCCTGCTGCCGGTCAACGCCCCGCGCTGCCCATTCCGCCACGGTGCCCATCGTGATGGCGCCATGCGCAGCG ACAGCAATGGCGGCGCCAGTCCCAACTATCAGCCGAACCGCTTTGGCACCCAGCAGCCGAGCGAGCAGCACGAACCGGCC TTGAGTCTGGAAGGGGCTGCCCTGCACTACGACTTCCGTGACTACGACAGCGATTACTACAGCCAGCCGGGCAAGCTGTT CCGCATCATGGATGAGGGGCAGCGCTCGCGCCTCGCCGCCAATATGGCACGTTCCCTCATCAACGTGGAGGATGACGCCA TCGTCGTCGCCCAGCTCCGGCATCTTGAGCAGGCCGACCCCGAGTACGCCAAGCGGGTGGAGCTGGCACTGGCTGCGCTG CAACGCTAA
Upstream 100 bases:
>100_bases AATACCCATTTGCGATACCTATCAAAGGGCTAGGAAAGGCCCATTGGCCCATGAGGAGCGGGATCCGTAGGCTGACCCCT ATCAACAAGGAGAGACATTC
Downstream 100 bases:
>100_bases GCGACCAGGATGCAATAAAAGAACGGGGGCCGGCGGGCCCCCTTCTTTCAACCCCAGTACACGGGATAAATTCTGAGCCC ACGGCACGTCGAGTCTTGCA
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTDNTLHSANGAPVVDNNNSLTAGPRGPVLMQDIWLMEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISAFSKADLFN AIGKQTPVFLRFSTVAGEKGAADAERDVRGFALKFYTEQGNWDLVGNNTPVFFIREPLKFPDFIHTQKRDPRTNLRSATA AWDFWSRHPESLHQVTILFSDRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTEQGHSFYTDEEAANVVGQDRETS QTDLFNAIERGDFPRWKVYVQVMPEADAQSYRIHPFDLTKVWPHSDYPLIPVGVLELNQNPDNYFAHVEQAAFTPANVVP GIGFSPDRMLQGRLFSYGDTQRYRLGVNHGLLPVNAPRCPFRHGAHRDGAMRSDSNGGASPNYQPNRFGTQQPSEQHEPA LSLEGAALHYDFRDYDSDYYSQPGKLFRIMDEGQRSRLAANMARSLINVEDDAIVVAQLRHLEQADPEYAKRVELALAAL QR
Sequences:
>Translated_482_residues MTDNTLHSANGAPVVDNNNSLTAGPRGPVLMQDIWLMEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISAFSKADLFN AIGKQTPVFLRFSTVAGEKGAADAERDVRGFALKFYTEQGNWDLVGNNTPVFFIREPLKFPDFIHTQKRDPRTNLRSATA AWDFWSRHPESLHQVTILFSDRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTEQGHSFYTDEEAANVVGQDRETS QTDLFNAIERGDFPRWKVYVQVMPEADAQSYRIHPFDLTKVWPHSDYPLIPVGVLELNQNPDNYFAHVEQAAFTPANVVP GIGFSPDRMLQGRLFSYGDTQRYRLGVNHGLLPVNAPRCPFRHGAHRDGAMRSDSNGGASPNYQPNRFGTQQPSEQHEPA LSLEGAALHYDFRDYDSDYYSQPGKLFRIMDEGQRSRLAANMARSLINVEDDAIVVAQLRHLEQADPEYAKRVELALAAL QR >Mature_481_residues TDNTLHSANGAPVVDNNNSLTAGPRGPVLMQDIWLMEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISAFSKADLFNA IGKQTPVFLRFSTVAGEKGAADAERDVRGFALKFYTEQGNWDLVGNNTPVFFIREPLKFPDFIHTQKRDPRTNLRSATAA WDFWSRHPESLHQVTILFSDRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTEQGHSFYTDEEAANVVGQDRETSQ TDLFNAIERGDFPRWKVYVQVMPEADAQSYRIHPFDLTKVWPHSDYPLIPVGVLELNQNPDNYFAHVEQAAFTPANVVPG IGFSPDRMLQGRLFSYGDTQRYRLGVNHGLLPVNAPRCPFRHGAHRDGAMRSDSNGGASPNYQPNRFGTQQPSEQHEPAL SLEGAALHYDFRDYDSDYYSQPGKLFRIMDEGQRSRLAANMARSLINVEDDAIVVAQLRHLEQADPEYAKRVELALAALQ R
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=482, Percent_Identity=52.2821576763486, Blast_Score=496, Evalue=1e-140, Organism=Escherichia coli, GI48994891, Length=395, Percent_Identity=46.8354430379747, Blast_Score=352, Evalue=4e-98, Organism=Caenorhabditis elegans, GI71998444, Length=484, Percent_Identity=52.6859504132231, Blast_Score=509, Evalue=1e-145, Organism=Caenorhabditis elegans, GI25151141, Length=478, Percent_Identity=51.4644351464435, Blast_Score=487, Evalue=1e-138, Organism=Caenorhabditis elegans, GI25147792, Length=479, Percent_Identity=50.9394572025052, Blast_Score=486, Evalue=1e-138, Organism=Saccharomyces cerevisiae, GI6320462, Length=491, Percent_Identity=44.1955193482688, Blast_Score=387, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6321525, Length=381, Percent_Identity=45.4068241469816, Blast_Score=338, Evalue=9e-94, Organism=Drosophila melanogaster, GI17981717, Length=447, Percent_Identity=50.1118568232662, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI19920968, Length=450, Percent_Identity=45.5555555555556, Blast_Score=418, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54546; Mature: 54415
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNTLHSANGAPVVDNNNSLTAGPRGPVLMQDIWLMEKLAHFDRERIPERVVHAKGSGA CCCCCEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC YGTFTVTHDISAFSKADLFNAIGKQTPVFLRFSTVAGEKGAADAERDVRGFALKFYTEQG EEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHCCCEEEEEEEEECC NWDLVGNNTPVFFIREPLKFPDFIHTQKRDPRTNLRSATAAWDFWSRHPESLHQVTILFS CEEEECCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE DRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTEQGHSFYTDEEAANVVGQDRETS CCCCCHHHHHHCCCCCEEEHHHCCCCCEEEEEEEEECCCCCCEECCHHHHHHCCCCCCCH QTDLFNAIERGDFPRWKVYVQVMPEADAQSYRIHPFDLTKVWPHSDYPLIPVGVLELNQN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCEECCEECCCCCCCEEEEEEEEECCC PDNYFAHVEQAAFTPANVVPGIGFSPDRMLQGRLFSYGDTQRYRLGVNHGLLPVNAPRCP CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHCCCCCCCEEEEECCCCEECCCCCCCC FRHGAHRDGAMRSDSNGGASPNYQPNRFGTQQPSEQHEPALSLEGAALHYDFRDYDSDYY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCEEEEEEHHHCCCHHH SQPGKLFRIMDEGQRSRLAANMARSLINVEDDAIVVAQLRHLEQADPEYAKRVELALAAL CCCCCEEEEHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHH QR CC >Mature Secondary Structure TDNTLHSANGAPVVDNNNSLTAGPRGPVLMQDIWLMEKLAHFDRERIPERVVHAKGSGA CCCCEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC YGTFTVTHDISAFSKADLFNAIGKQTPVFLRFSTVAGEKGAADAERDVRGFALKFYTEQG EEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHCCCEEEEEEEEECC NWDLVGNNTPVFFIREPLKFPDFIHTQKRDPRTNLRSATAAWDFWSRHPESLHQVTILFS CEEEECCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE DRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTEQGHSFYTDEEAANVVGQDRETS CCCCCHHHHHHCCCCCEEEHHHCCCCCEEEEEEEEECCCCCCEECCHHHHHHCCCCCCCH QTDLFNAIERGDFPRWKVYVQVMPEADAQSYRIHPFDLTKVWPHSDYPLIPVGVLELNQN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCEECCEECCCCCCCEEEEEEEEECCC PDNYFAHVEQAAFTPANVVPGIGFSPDRMLQGRLFSYGDTQRYRLGVNHGLLPVNAPRCP CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHCCCCCCCEEEEECCCCEECCCCCCCC FRHGAHRDGAMRSDSNGGASPNYQPNRFGTQQPSEQHEPALSLEGAALHYDFRDYDSDYY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCEEEEEEHHHCCCHHH SQPGKLFRIMDEGQRSRLAANMARSLINVEDDAIVVAQLRHLEQADPEYAKRVELALAAL CCCCCEEEEHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHH QR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]