| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300888
Identifier: 145300888
GI number: 145300888
Start: 4334454
End: 4335113
Strand: Direct
Name: 145300888
Synonym: ASA_4034
Alternate gene names: NA
Gene position: 4334454-4335113 (Clockwise)
Preceding gene: 145300887
Following gene: 145300890
Centisome position: 92.18
GC content: 63.94
Gene sequence:
>660_bases ATGGCGCTGGCACTGTTTGATTTGGACGAGACCCTGATTGCCGGGGATTCCGCCAGCCTCTGGCTGGAGTACATGGTGGC TCAGGAGCTGGCCCCGGCGGGCATGATCGCCGAGGAGCAGGCCATGATGTCCCTCTACCATCAGGGCAAGATGGATATGC AGGAGTACATGGCGTTCACCCTGCAACCCCTGGTGGGCAAATCACGCCAGTGGCTCGGCCAGCAGTGCCACCACTTCGCC GAGCAGGTGTTGCGGGAGCGGATCTACCCCCAAGGACTGGCACGCATCGAGTGGCATCGTCAGCGTGGCGACACGCTGGT GCTGATCTCGGCCTCTGGCGAGCATCTGGTGGCGCCCATGGCGCAGATGCTGGGGATGGATCACTGCGTCGCCATACTGC TGGATGAAGAGGAGGGTCGGCTGACCGGCCAGACCCGCGGCACACTGAGTTTTCAGGAGGGCAAGGTAGTACGCATCAAC CAGCTGTTTGCCACAGACGCAGCCCCCTGGCAGGAGAGCTTTGGGTACAGCGATTCCCACAACGATCTGCCGCTGCTGAA GGCCGTGGCCCACCCCCATGCGGTCAATCCGGCCCCCGGCCTGCGGCAAGTCGCCGCCGAACACGACTGGCCCACCCTCG ACTGGCAACTCGCCTGCTGA
Upstream 100 bases:
>100_bases TGTGAGGTAGCATAAGCGATGGATTACTCCCCATTTATATCGGCGAGCGGCCAACATGCCGCCCGTCAATCATCACAGTT ATGGATAGCTAGGAGCAGGC
Downstream 100 bases:
>100_bases ATGACTGGCAACTGGCCTGCTGAATGAAGAAGAGGCCCTCAGGCCTCTTCGTTGCTCAACACGCTGTCGTTGGGCGGGAT CCCCTTCTCGGCGACAGTTT
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MALALFDLDETLIAGDSASLWLEYMVAQELAPAGMIAEEQAMMSLYHQGKMDMQEYMAFTLQPLVGKSRQWLGQQCHHFA EQVLRERIYPQGLARIEWHRQRGDTLVLISASGEHLVAPMAQMLGMDHCVAILLDEEEGRLTGQTRGTLSFQEGKVVRIN QLFATDAAPWQESFGYSDSHNDLPLLKAVAHPHAVNPAPGLRQVAAEHDWPTLDWQLAC
Sequences:
>Translated_219_residues MALALFDLDETLIAGDSASLWLEYMVAQELAPAGMIAEEQAMMSLYHQGKMDMQEYMAFTLQPLVGKSRQWLGQQCHHFA EQVLRERIYPQGLARIEWHRQRGDTLVLISASGEHLVAPMAQMLGMDHCVAILLDEEEGRLTGQTRGTLSFQEGKVVRIN QLFATDAAPWQESFGYSDSHNDLPLLKAVAHPHAVNPAPGLRQVAAEHDWPTLDWQLAC >Mature_218_residues ALALFDLDETLIAGDSASLWLEYMVAQELAPAGMIAEEQAMMSLYHQGKMDMQEYMAFTLQPLVGKSRQWLGQQCHHFAE QVLRERIYPQGLARIEWHRQRGDTLVLISASGEHLVAPMAQMLGMDHCVAILLDEEEGRLTGQTRGTLSFQEGKVVRINQ LFATDAAPWQESFGYSDSHNDLPLLKAVAHPHAVNPAPGLRQVAAEHDWPTLDWQLAC
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24534; Mature: 24403
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALALFDLDETLIAGDSASLWLEYMVAQELAPAGMIAEEQAMMSLYHQGKMDMQEYMAFT CEEEEEECCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LQPLVGKSRQWLGQQCHHFAEQVLRERIYPQGLARIEWHRQRGDTLVLISASGEHLVAPM HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHH AQMLGMDHCVAILLDEEEGRLTGQTRGTLSFQEGKVVRINQLFATDAAPWQESFGYSDSH HHHHCCCCEEEEEEECCCCCEECCCCCEEEECCCCEEEEEHEECCCCCCHHHHCCCCCCC NDLPLLKAVAHPHAVNPAPGLRQVAAEHDWPTLDWQLAC CCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEECC >Mature Secondary Structure ALALFDLDETLIAGDSASLWLEYMVAQELAPAGMIAEEQAMMSLYHQGKMDMQEYMAFT EEEEEECCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LQPLVGKSRQWLGQQCHHFAEQVLRERIYPQGLARIEWHRQRGDTLVLISASGEHLVAPM HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHH AQMLGMDHCVAILLDEEEGRLTGQTRGTLSFQEGKVVRINQLFATDAAPWQESFGYSDSH HHHHCCCCEEEEEEECCCCCEECCCCCEEEECCCCEEEEEHEECCCCCCHHHHCCCCCCC NDLPLLKAVAHPHAVNPAPGLRQVAAEHDWPTLDWQLAC CCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]