| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300745
Identifier: 145300745
GI number: 145300745
Start: 4171850
End: 4172470
Strand: Direct
Name: 145300745
Synonym: ASA_3884
Alternate gene names: NA
Gene position: 4171850-4172470 (Clockwise)
Preceding gene: 145300744
Following gene: 145300746
Centisome position: 88.72
GC content: 65.38
Gene sequence:
>621_bases ATGAAACGCAAAAAACTCCCTCTTCACAACAACAAATGGGTGCGCCGCATCCATGCCTGGGCCGGCTTTGCCACCCTCAC CCTGATGCTGCTCTACGGCCTGACCGGCCTGTGGCTGCAACACAGGGCCGTGCTCCCCATTCCCGGCCCCCATACCGACA AGTCGAGCGAGGAGATAGGGCTGAGCGCGCCGCTGGCAAGCCCGGACGAGCTGAAAACCCTGCTGCAACAGCGCTATCCG GAGGGCTTTGGCGAGGGACGCGCCATGATCACACCGGCCCAGACCCTGCCCACCCCGGCTGGCCCTCTCACACTGCCGGC CCGCTGGGAGATGCGCGGCGTCACCCTCAGCCAGAGCGTGGCTGCCAGCTATGTGGAGGGGACCCTGTTGGTTCGCACCG AATTGCAGCAGGCCAACTTCGCCGCCAGCCTGAACCGGCTGCATCGCGGCATGGGTACCGGCCTCTCCTGGCAGCTGTTC GGCGATCTGGCGGCGCTGGCCATGTTGCTGCTGGCGCTCACCAGTTTGCTGATGTGGAACAAGCTGCACGGCCCGGCCGG CAGAGGCATAGCCCTGCTGCTGACAGGCGCCGTTGCCACTGTGCTGGTTGCTCTTCTCTAG
Upstream 100 bases:
>100_bases CCAGCTGAATCTGAGCGCAGCCTACCGTTTCTGATCTTCTTTTCATCACAGATGACCCCTGGCCAGCGATTGCTGGCCAG ATTTTTATGAAGCGCAAAAT
Downstream 100 bases:
>100_bases CCCATTAACCGACACCAAAGCGGGATCCGGCTCTCACGGGCGGTAACCCCGCTCGCCGCCGAAGTAACAAAGGGTAACCG GCTGTCGATGGGGGTCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKRKKLPLHNNKWVRRIHAWAGFATLTLMLLYGLTGLWLQHRAVLPIPGPHTDKSSEEIGLSAPLASPDELKTLLQQRYP EGFGEGRAMITPAQTLPTPAGPLTLPARWEMRGVTLSQSVAASYVEGTLLVRTELQQANFAASLNRLHRGMGTGLSWQLF GDLAALAMLLLALTSLLMWNKLHGPAGRGIALLLTGAVATVLVALL
Sequences:
>Translated_206_residues MKRKKLPLHNNKWVRRIHAWAGFATLTLMLLYGLTGLWLQHRAVLPIPGPHTDKSSEEIGLSAPLASPDELKTLLQQRYP EGFGEGRAMITPAQTLPTPAGPLTLPARWEMRGVTLSQSVAASYVEGTLLVRTELQQANFAASLNRLHRGMGTGLSWQLF GDLAALAMLLLALTSLLMWNKLHGPAGRGIALLLTGAVATVLVALL >Mature_206_residues MKRKKLPLHNNKWVRRIHAWAGFATLTLMLLYGLTGLWLQHRAVLPIPGPHTDKSSEEIGLSAPLASPDELKTLLQQRYP EGFGEGRAMITPAQTLPTPAGPLTLPARWEMRGVTLSQSVAASYVEGTLLVRTELQQANFAASLNRLHRGMGTGLSWQLF GDLAALAMLLLALTSLLMWNKLHGPAGRGIALLLTGAVATVLVALL
Specific function: Unknown
COG id: COG3295
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22339; Mature: 22339
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKKLPLHNNKWVRRIHAWAGFATLTLMLLYGLTGLWLQHRAVLPIPGPHTDKSSEEIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC LSAPLASPDELKTLLQQRYPEGFGEGRAMITPAQTLPTPAGPLTLPARWEMRGVTLSQSV CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHH AASYVEGTLLVRTELQQANFAASLNRLHRGMGTGLSWQLFGDLAALAMLLLALTSLLMWN HHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KLHGPAGRGIALLLTGAVATVLVALL HCCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKRKKLPLHNNKWVRRIHAWAGFATLTLMLLYGLTGLWLQHRAVLPIPGPHTDKSSEEIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC LSAPLASPDELKTLLQQRYPEGFGEGRAMITPAQTLPTPAGPLTLPARWEMRGVTLSQSV CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHH AASYVEGTLLVRTELQQANFAASLNRLHRGMGTGLSWQLFGDLAALAMLLLALTSLLMWN HHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KLHGPAGRGIALLLTGAVATVLVALL HCCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA