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The map label for this gene is lptF [H]

Identifier: 145300687

GI number: 145300687

Start: 4116169

End: 4117281

Strand: Direct

Name: lptF [H]

Synonym: ASA_3824

Alternate gene names: 145300687

Gene position: 4116169-4117281 (Clockwise)

Preceding gene: 145300680

Following gene: 145300688

Centisome position: 87.53

GC content: 57.86

Gene sequence:

>1113_bases
ATGACTGTGATCGTTTTCCGATATTTGTTCAGGGAAACCCTGAAAACGCAGCTGGCAGTGTTATTCGTATTGCTGCTTAT
CTTTGTCAGCCAACAATTTATCAAGATCATCGGCGATGCCGCCGATGGCGAGGTACCGACACGCCTGGTTTCCACCCTGT
TGCTGCTCAACCTGTCCAATATGGCCTTGTTGATGCTGCCTATCAGCCTGTTTTTAGCCATCTTGTTTGCTCACGGGCGC
CTGTATGCCGAAAGTGAGATGACGGTGCTGCATGCGGTGGGATTCAGTCACCGCTTCGTGATGCGCTGCGCCATGGTGCT
GGCCCTGTTGACTGCCGCCGTTGCGGCCTTCAACACCGGCTGGATAGCTCCCCAGGCCAAGGAGCGGGAGTATCAGGTGA
TCGATGAATTCAAGGCGGATCCGGGTATCTCTTTCCTGCAGGCGGGTCGCTTCATGGAGCTCGACAAGGGGCGCCTCGTT
GCCTACATCCAGGAGTTGAATGACAAGGCGTCTCTGCTGCAGAAGATCTTCGTGCTGCAACGCTCCCATGATGGCAAGCC
GCCCTCTGTGGTGGTCGCGACGGAAGGGGTAGTGACCCTCGACAGCAATGGCCTGCAATGGTTGACCCTGAAAGATGGTT
CTCGCTATGAGGGGCACTTCAGCACCAGGCAGTTCCAGATCTCCGAATTTGACGAGTACAGTCTGGTGATCCGTCAGCAG
GAGATGGAGCGTTCCAACCGCAAGGCGGCCGCCAGGCCGACGGTCGATCTGCTGGGGACTCAGGACAACGGCATGATGGC
CGAGCTGCAGTGGCGTATCTCGTTGCCGCTCTCCATTCTGGTGCTCACCTTCCTGGTGGTGCCACTGGCGCGGGTCAACC
CCCGTCAGGGCCGTTATGCCAAGCTGCTGCCGGCCATCTTGCTCTATCTCTCCTACTTCCTGTTGCTCAGCGCGGCGCGC
TCGGCCATCGACAGCGGACGCCTGCCCCATTGGCCGGGTATGTTCCTGGTGCCCCTGGTCTATCTGCTGTTGATCGGCCT
GCCGCTCAACTTACAGGGCACCAGTTGGTGGAACGGGGTGAAAGGGCGCTATTTCAACAGAAAATCAGCATGA

Upstream 100 bases:

>100_bases
CGGAGCGAACAGCCATAGGCTCCGCAGTTCAAACTGGTAAAAATCCAATATACGGCCCTATTTTTCAGGCATTCGACTAA
AAACACAAGTTTACTTGGGA

Downstream 100 bases:

>100_bases
TACTGCAACTTAGGAATCTCGCCTGATGTTTGGCATTCTCGATAGATATATCGGCAGGGTCATTTTCATGTCGATCCTGT
TGTGTGAACTGACCCTGGTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSNMALLMLPISLFLAILFAHGR
LYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTGWIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLV
AYIQELNDKASLLQKIFVLQRSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQ
EMERSNRKAAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPRQGRYAKLLPAILLYLSYFLLLSAAR
SAIDSGRLPHWPGMFLVPLVYLLLIGLPLNLQGTSWWNGVKGRYFNRKSA

Sequences:

>Translated_370_residues
MTVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSNMALLMLPISLFLAILFAHGR
LYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTGWIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLV
AYIQELNDKASLLQKIFVLQRSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQ
EMERSNRKAAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPRQGRYAKLLPAILLYLSYFLLLSAAR
SAIDSGRLPHWPGMFLVPLVYLLLIGLPLNLQGTSWWNGVKGRYFNRKSA
>Mature_369_residues
TVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSNMALLMLPISLFLAILFAHGRL
YAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTGWIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVA
YIQELNDKASLLQKIFVLQRSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQE
MERSNRKAAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPRQGRYAKLLPAILLYLSYFLLLSAARS
AIDSGRLPHWPGMFLVPLVYLLLIGLPLNLQGTSWWNGVKGRYFNRKSA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=373, Percent_Identity=40.7506702412869, Blast_Score=218, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41664; Mature: 41532

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSN
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
MALLMLPISLFLAILFAHGRLYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTG
HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
WIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQELNDKASLLQKIFVLQ
CCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEECCCCHHHHHHHHHCHHHHHHHHHHHHH
RSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQ
HCCCCCCCEEEEEECCEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHH
EMERSNRKAAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPRQGRYA
HHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHH
KLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLVYLLLIGLPLNLQGTSWWNGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
KGRYFNRKSA
CCCCCCCCCC
>Mature Secondary Structure 
TVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
MALLMLPISLFLAILFAHGRLYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTG
HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
WIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQELNDKASLLQKIFVLQ
CCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEECCCCHHHHHHHHHCHHHHHHHHHHHHH
RSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQ
HCCCCCCCEEEEEECCEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHH
EMERSNRKAAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPRQGRYA
HHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHH
KLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLVYLLLIGLPLNLQGTSWWNGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
KGRYFNRKSA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]