| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300672
Identifier: 145300672
GI number: 145300672
Start: 4098251
End: 4098688
Strand: Direct
Name: 145300672
Synonym: ASA_3805
Alternate gene names: NA
Gene position: 4098251-4098688 (Clockwise)
Preceding gene: 145300671
Following gene: 145300673
Centisome position: 87.15
GC content: 60.05
Gene sequence:
>438_bases ATGAGTCATGTATTGAGTACGGGTCTTGCCAGCCCGATGGACGCCAGCGCCTTTTTCGAGGCCCAGCTGAGATTTCGCAC CGACCCGGCGGACCTGGCTGCCGATCTGCTGGAAAAAGAAGAGCGCATCGTCGTCATCGACACTCGATCCGCGCAGCATT ACCGGCTGGGGCATATTCCAGGGGCCGTCTCTTTCCCCCATGGATCCATGAATCAAGCGACGACGGCCACCCTTGCGCGG GACAAGGTTTATGTCTGCTACTGCGATGGCATAGGCTGCAACGGCTCGACTCAAGGGGCCTACAAACTGGCGGCGCTGGG CTTTCAGGTCAAGGAGCTGATAGGTGGCCTGCACTGGTGGCGTCAGGACGGCTTTGCCGTCGCCCTCGGTGAAGATGCGG GCGTTTTGCTGGAAGGGGGAATGACCTGTGGCTACTGA
Upstream 100 bases:
>100_bases GAGGCTTCCCTATGAGCCATGTATTGGGCTCCGACCTCATCAGCTTGGTCAACACCATCGCCACCACCCGGATCCGGGTT TAGCCACAAGGAGCTTCACC
Downstream 100 bases:
>100_bases TCATCATCTGAACGAGTTCGACCAAGCGGTTGGCGTCCTCTTGCCCGACTGGCGCGGGGCCGAGTTTCCTCCCCATCAGC CACTGTCAGGCTGGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase Protein; Rhodanese-Like Sulfurtransferase; Rhodanese Sulfurtransferase; Transcriptional Regulator AraC Family; Rhodanese Domain Sulfurtransferase; Sulfurtransferase; Rhodanese Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSHVLSTGLASPMDASAFFEAQLRFRTDPADLAADLLEKEERIVVIDTRSAQHYRLGHIPGAVSFPHGSMNQATTATLAR DKVYVCYCDGIGCNGSTQGAYKLAALGFQVKELIGGLHWWRQDGFAVALGEDAGVLLEGGMTCGY
Sequences:
>Translated_145_residues MSHVLSTGLASPMDASAFFEAQLRFRTDPADLAADLLEKEERIVVIDTRSAQHYRLGHIPGAVSFPHGSMNQATTATLAR DKVYVCYCDGIGCNGSTQGAYKLAALGFQVKELIGGLHWWRQDGFAVALGEDAGVLLEGGMTCGY >Mature_144_residues SHVLSTGLASPMDASAFFEAQLRFRTDPADLAADLLEKEERIVVIDTRSAQHYRLGHIPGAVSFPHGSMNQATTATLARD KVYVCYCDGIGCNGSTQGAYKLAALGFQVKELIGGLHWWRQDGFAVALGEDAGVLLEGGMTCGY
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15554; Mature: 15423
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVLSTGLASPMDASAFFEAQLRFRTDPADLAADLLEKEERIVVIDTRSAQHYRLGHIP CCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCC GAVSFPHGSMNQATTATLARDKVYVCYCDGIGCNGSTQGAYKLAALGFQVKELIGGLHWW CCEECCCCCCCCHHEEEEECCEEEEEEECCCCCCCCCCCCEEHHHHCHHHHHHHHHHHHC RQDGFAVALGEDAGVLLEGGMTCGY CCCCEEEEECCCCCEEEECCEECCC >Mature Secondary Structure SHVLSTGLASPMDASAFFEAQLRFRTDPADLAADLLEKEERIVVIDTRSAQHYRLGHIP CCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCC GAVSFPHGSMNQATTATLARDKVYVCYCDGIGCNGSTQGAYKLAALGFQVKELIGGLHWW CCEECCCCCCCCHHEEEEECCEEEEEEECCCCCCCCCCCCEEHHHHCHHHHHHHHHHHHC RQDGFAVALGEDAGVLLEGGMTCGY CCCCEEEEECCCCCEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA